Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
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We have seen a large number of SARS-CoV-2 structures being determined rapidly and deposited into the PDB and EMDB, which provides a starting point for structure-guided drug discovery. In order to validate and reanalyze the data by the cryo-EM community, we would like to make the following urgent appeal. a) If you have deposited any cryo-EM structures related to SARS-CoV-2 to the EMDB (and possibly the PDB), please deposit the raw data to EMPIAR. b) If you have collected cryo-EM data related to SARS-CoV-2 but have not yet deposited a structure, please consider depositing the raw data to EMPIAR, so that the cryo-EM community could contribute to processing and model-building.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2023-06-07 |  |
Cryo-electron micrographs of Hantaan virus polymerase in its apo state [2865 multi-frame micrographs composed of 50 frames each in TIFF format] | Durieux Trouilleton Q, Arragain B, Malet H [Pubmed: 37221161] [DOI: 10.1038/s41467-023-38555-w] EMD-16427,8c4s |
660.7 GB | 3.27 Å |
| 2023-06-07 |  |
Cryo-electron micrographs of Hantaan virus polymerase in pre-initiation state [3261 multi-frame micrographs composed of 50 frames each in TIFF format] | Durieux Trouilleton Q, Arragain B, Malet H [Pubmed: 37221161] [DOI: 10.1038/s41467-023-38555-w] EMD-16429,8c4u |
776.9 GB | 3.36 Å |
| 2023-06-07 |  |
Cryo-electron micrographs of Hantaan virus polymerase bound to its 5' viral RNA [2547 multi-frame micrographs composed of 50 frames each in TIFF format] | Durieux Trouilleton Q, Arragain B, Malet H [Pubmed: 37221161] [DOI: 10.1038/s41467-023-38555-w] EMD-16428,8c4t |
608.2 GB | 3.23 Å |
| 2023-06-07 |  |
Cryo-electron micrographs of Hantaan virus polymerase in elongation state [3785 multi-frame micrographs composed of 50 frames each in TIFF format] | Durieux Trouilleton Q, Arragain B, Malet H [Pubmed: 37221161] [DOI: 10.1038/s41467-023-38555-w] EMD-16430,8c4v |
927.5 GB | 3.14 Å |
| 2023-06-05 |  |
Cryo electron microscopy of Mce1 transporter from Mycobacterium smegmatis [multiple data sets in TIFF format] | Chen J, Bhabha G, Ekiert D [Pubmed: 36711512] [DOI: 10.21203/rs.3.rs-2412186/v1] EMD-29023,EMD-29024,EMD-29025,EMD-29228,EMD-29229,EMD-29230,EMD-29231,EMD-29232,EMD-29233,EMD-29234,EMD-29235,EMD-29236,EMD-29237,EMD-29238,EMD-29239,EMD-29240,EMD-29241,EMD-29242,8fed,8fee,8fef |
20.9 TB | 2.71 - 3.19 Å |
| 2023-06-02 |  |
Cryo-ET tilt series from mouse islets lift-out sample [multiple data sets in TIFF format] | Wu Y, Qin C, Du W, Guo Z, Chen L, Guo Q [Pubmed: 37201639] [DOI: 10.1016/j.jsb.2023.107971] EMD-35652,EMD-35653,EMD-35654,EMD-35655 |
16.0 GB | — |
| 2023-06-02 |  |
f1-derived nanorods [25065 multi-frame micrographs composed of 40 frames each in TIFF format] | Conners R, McLaren MJ, Gold V [Pubmed: 37169795] [DOI: 10.1038/s41467-023-37915-w] EMD-15831,EMD-15832,EMD-15833,8b3o,8b3p,8b3q |
9.9 TB | 2.58 - 2.97 Å |
| 2023-06-02 |  |
Mycobacterium phage Patience [8640 multi-frame micrographs composed of 30 frames each in TIFF format] | Podgorski JM EMD-40077,8giu |
2.2 TB | 2.39 Å |
| 2023-05-26 |  |
Archaeal DNA ligase and heterotrimeric PCNA with ligatable nicked DNA [multiple data sets in TIFF format] | Sverzhinsky A, Pascal JM [Pubmed: 34838188] [DOI: 10.1016/j.str.2021.11.002] EMD-24624,EMD-24625,7rpw,7rpx |
5.4 TB | 4.2 - 4.38 Å |
| 2023-05-26 |  |
Cryo-EM SPA datasets for Antibody 4-33 in complex with prefusion SARS-CoV-2 Spike glycoprotein (K3 movies/.tif files) [6976 multi-frame micrographs composed of 60 frames each in TIFF format] | Casner RG, Reddem ER, Shapiro L EMD-26964,8csj |
1.8 TB | 3.53 Å |
| 2023-05-23 |  |
Archaeal DNA ligase and heterotrimeric PCNA with non-ligatable nicked DNA [3014 multi-frame micrographs composed of 37 frames each in TIFF format] | Sverzhinsky A, Pascal JM [Pubmed: 34838188] [DOI: 10.1016/j.str.2021.11.002] EMD-24618,7rpo |
2.1 TB | 4.16 Å |
| 2023-05-23 |  |
PIC-Mediator in complex with +1 nucleosome (T40N) [20082 micrographs in MRC format] | Chen X, Wang X, Liu W, Ren Y, Qu X, Li J, Yin X, Xu Y [Pubmed: 36201575] [DOI: 10.1126/science.abn8131] EMD-34359,8gxq |
1.7 TB | 5.04 Å |
| 2023-05-23 |  |
Cryo-EM structure of pioneer factor Cbf1 bound to the nucleosome [6339 multi-frame micrographs composed of 51 frames each in TIFF format] | Eek P, Tan S [Pubmed: 36996811] [DOI: 10.1016/j.molcel.2023.03.006] EMD-25406,7ssa |
4.1 TB | 3.2 Å |
| 2023-05-22 |  |
Benchmark FIB SEM data (#2) of HeLa cells previously imaged by Zeiss LSM900 Airyscan microscopy [multiple data sets in TIFF format] | Peddie CJ, Domart MC, Collinson LM S-BSST1075 |
511.9 GB | — |
| 2023-05-22 |  |
Venous puncture wound thrombi, 1, 5, 20 min post-puncture, 100 nm XY raw images, 20 nm XY pixels every 20 micons, 3 nm wide area TEM montages at selected depth [15 multi-frame micrographs composed of 1 frames each in DM4 format] | Storrie B, Leapman RD [Pubmed: 34531522] [DOI: 10.1038/s42003-021-02615-y] |
381.2 GB | — |
| 2023-05-17 |  |
Single particle cryogenic electron micrographs of respiratory complex I from Drosophila melanogaster thoracic muscle [11045 multi-frame micrographs composed of 75 frames each in TIFF format] | Letts JA, Padavannil A [Pubmed: 36952377] [DOI: 10.7554/eLife.84415] EMD-28581,EMD-28582,8esw,8esz |
7.0 TB | 3.3 - 3.4 Å |
| 2023-05-17 |  |
Structural basis of GTPase-mediated mitochondrial ribosome biogenesis and recycling - dataset2 [10537 multi-frame micrographs composed of 40 frames each in TIFF format] | Hillen HS [Pubmed: 34135319] [DOI: 10.1038/s41467-021-23702-y] EMD-12870,EMD-12867,EMD-12868,7of5,7of2,7of3 |
2.2 TB | 2.7 - 2.9 Å |
| 2023-05-17 |  |
LPHN3 (ADGRL3) 7TM domain bound to tethered agonist in complex with G protein heterotrimer [8877 multi-frame micrographs composed of 63 frames each in TIFF format] | Barros-Alvarez X, Panova O, Skiniotis G [Pubmed: 35418682] [DOI: 10.1038/s41586-022-04575-7] EMD-25076,7sf7 |
5.3 TB | 2.9 Å |
| 2023-05-17 |  |
GPR56 (ADGRG1) 7TM domain bound to tethered agonist in complex with G protein heterotrimer [6773 multi-frame micrographs composed of 57 frames each in TIFF format] | Barros-Alvarez X, Panova O, Skiniotis G [Pubmed: 35418682] [DOI: 10.1038/s41586-022-04575-7] EMD-25077,7sf8 |
3.6 TB | 2.7 Å |
| 2023-05-16 |  |
CryoEM of E. coli RNA polymerase Sigma N bound to mismatch DNA fragment dhsU36mm2 (-12A) [multiple data sets in TIFF, MRC and MRCS formats] | Mueller AU, Chen J, Wu M, Chiu C, Nixon BT, Campbell EA, Darst SA [Pubmed: 36972428] [DOI: 10.1073/pnas.2220874120] EMD-28783,EMD-28784,EMD-28785,8f1j |
8.2 TB | 2.6 - 3.0 Å |
| 2023-05-16 |  |
CryoEM of E. coli RNA polymerase Sigma N bound to full duplex DNA fragment dhsU36 (-12T) [multiple data sets in TIFF, MRC and MRCS formats] | Mueller AU, Chen J, Wu M, Chiu C, Nixon BT, Campbell EA, Darst SA [Pubmed: 36972428] [DOI: 10.1073/pnas.2220874120] EMD-28786,EMD-28790,EMD-28791,8f1k |
2.4 TB | 2.8 - 3.1 Å |
| 2023-05-16 |  |
CryoEM of E. coli RNA polymerase Sigma N bound to mismatch DNA fragment dhsU36mm1 (-12T) [multiple data sets in TIFF, MRC and MRCS formats] | Mueller AU, Chen J, Wu M, Chiu C, Nixon BT, Campbell EA, Darst SA [Pubmed: 36972428] [DOI: 10.1073/pnas.2220874120] EMD-28792,EMD-28794,EMD-28797,8f1i |
4.4 TB | 3.0 Å |
| 2023-05-16 |  |
Cryo-Electron microscopy of the antimicrobial peptide Drosocin from Drosophila melanogaster bound to the E.coli 70S ribosome. [8861 multi-frame micrographs composed of 1532 frames each in EER format] | Koller TO, Morici M, Berger M, Safdari HA, Beckert B, Wilson DN [Pubmed: 36997646] [DOI: 10.1038/s41589-023-01293-7] EMD-15488,EMD-15523,EMD-15533,8akn,8am9,8ana |
7.9 TB | 2.1 - 2.8 Å |
| 2023-05-12 |  |
Purified human apoferritin tilt series, TomoBEAR benchmark [2089 multi-frame micrographs composed of 10 frames each in TIFF format] | Balyschew N, Yushkevich A, Mikirtumov V, Sanchez RM, Sprink T, Kudryashev M EMD-17232 |
159.1 GB | 2.8 Å |
| 2023-05-12 |  |
Quantification of gallium cryo-FIB milling damage in biological lamella [multiple data sets in MRC format] | Lucas BA, Grigorieff N | 8.1 GB | — |
