Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2025-07-07 |  |
Structural basis of BAK sequestration by MCL-1 and consequences for apoptosis initiation [34000 multi-frame micrographs composed of 810 frames each in EER format] | Uchikawa E, Myasnikov A, Dey R, Moldoveanu T [Pubmed: 40187349] [DOI: 10.1016/j.molcel.2025.03.013] |
13.3 TB | 3.34 Å |
| 2025-07-07 |  |
movies for NKCC1 bound with furosemide [multiple data sets in MRC and TIFF formats] | Cao E [Pubmed: 39875725] [DOI: 10.1038/s44318-025-00368-6] |
5.5 TB | 2.7 Å |
| 2025-07-06 |  |
Cryo-EM structure of the barley Yellow stripe 1 transporter [multiple data sets in TIFF format] | Yamagata A, Murata Y, Namba K, Terada T, Fukai S, Shirouzu M [Pubmed: 36424382] [DOI: 10.1038/s41467-022-34930-1] |
5.0 TB | 2.7 - 2.9 Å |
| 2025-07-03 |  |
Cryo-EM data used for the determincation of LACV-L replication late-elongation state [2165 multi-frame micrographs composed of 60 frames each in TIFF format] | Malet H, Arragain B, Trouilleton QD, Cusack S, Schoehn G [Pubmed: 35173159] [DOI: 10.1038/s41467-022-28428-z] |
615.8 GB | 3.9 Å |
| 2025-07-03 |  |
Structural and functional insights into the enzymatic plasticity of the SARS-CoV-2 NiRAN domain [22411 multi-frame micrographs composed of 40 frames each in TIFF format] | Campbell EA, Small GI, Darst SA [Pubmed: 37890482] [DOI: 10.1016/j.molcel.2023.10.001] |
5.3 TB | 2.9 Å |
| 2025-07-03 |  |
Complex structure of mouse C1ql3 with BAI3 [multiple data sets in TIFF format] | Miao Y, Jude KM, Garcia KC, Sudhof TC [Pubmed: 40316654] [DOI: 10.1038/s42003-025-08112-w] |
2.7 TB | 2.78 Å |
| 2025-07-03 |  |
Unaligned multi-frame micrographs of DNA polymerase theta with 3′-overhang DNA with 11-nt polyT and 6-nt MH sequence [10331 multi-frame micrographs composed of 50 frames each in MRC format] | Ito F, Li Z, Khant HA, Chen XS [Pubmed: 40253368] [DOI: 10.1038/s41467-025-58441-x] |
2.7 TB | 3.8 Å |
| 2025-07-03 |  |
Cryo electron micrographs of DOPC vesicles after extrusion with a 50 nm filter [multiple data sets in TIFF and MRC formats] | Schönnenbeck PS, Junglas BJ, Sachse CS [DOI: 10.1101/2025.01.09.632183] |
183.7 GB | — |
| 2025-07-03 |  |
Raw cryo-electron micrographs used in SPA reconstruction of MlaC in complex with a soluble construct of MlaD [9012 multi-frame micrographs composed of 50 frames each in TIFF format] | Wotherspoon PW, Bui SB, Sridhar PS, Bergeron JRCB, Knowles TJK [Pubmed: 39080293] [DOI: 10.1038/s41467-024-50615-3] |
1.5 TB | 4.35 - 4.38 Å |
| 2025-07-03 |  |
Multiple steps of dynein activation by Lis1 visualized by cryo-EM [1849 multi-frame micrographs composed of 40 frames each in MRC format] | Kendrick AA, Nguyen KHV, Ma W, Karasmanis EP, Amaro RE, Reck-Peterson SL, Leschziner AE [Pubmed: 40410592] [DOI: 10.1038/s41594-025-01558-w] |
129.4 GB | 4.1 Å |
| 2025-07-03 |  |
Dunaliella tertiolecta PSI-LHCI-TIDI1 supercomplex [22975 micrographs in MRC format] | Liu HW, Khera R, Iwai M, Merchant SS [Pubmed: 40523173] [DOI: 10.1073/pnas.2500621122] |
1.0 GB | 3.0 Å |
| 2025-07-03 |  |
Dunaliella salina PSI-LHCI-TIDI1 supercomplex [12541 multi-frame micrographs composed of 50 frames each in TIFF format] | Liu HW, Khera R, Iwai M, Merchant SS [Pubmed: 40523173] [DOI: 10.1073/pnas.2500621122] |
262.0 MB | 3.0 Å |
| 2025-07-03 |  |
Dunaliella tertiolecta PSI-LHCI supercomplex [10090 multi-frame micrographs composed of 50 frames each in TIFF format] | Liu HW, Khera R, Iwai M, Merchant SS [Pubmed: 40523173] [DOI: 10.1073/pnas.2500621122] |
209.0 MB | 2.1 Å |
| 2025-07-03 |  |
Dunaliella salina PSI-LHCI supercomplex [10743 multi-frame micrographs composed of 50 frames each in TIFF format] | Liu HW, Khera R, Iwai M, Merchant SS [Pubmed: 40523173] [DOI: 10.1073/pnas.2500621122] |
1.5 GB | 2.9 Å |
| 2025-07-03 |  |
Single particle Cryo EM of the C-terminal half LRRK2 G2019S mutant bound to MLi-2 [8788 multi-frame micrographs composed of 50 frames each in EER format] | Sanz Murillo M, Villagran Suarez A, Dederer V, Chatterjee D, Alegrio Louro J, Knapp S, Leschziner A [Pubmed: 38039358] [DOI: 10.1126/sciadv.adk6191] |
7.9 TB | 2.7 Å |
| 2025-07-01 |  |
CryoEM dataset of Cas12j3 (Casphi3) in complex with crRNA and target DNA after cleavage (postcatalytic state) [4445 multi-frame micrographs composed of 40 frames each in MRC format] | Carabias A, Fuglsang A, Temperini P, Pape T, Sofos N, Stella S, Erlendsson S, Montoya G [Pubmed: 34294706] [DOI: 10.1038/s41467-021-24707-3] |
5.6 TB | 2.66 Å |
| 2025-07-01 |  |
CryoEM dataset of Retron-Eco1 WT filaments in the presence of NAD+ [multiple data sets in MRC format] | Carabias A, Camara-Wilpert S, Mestre MR, Lopéz-Méndez B, Hendriks IA, Zhao R, Pape T, Fuglsang A, Luk SH, Nielsen ML, Pinilla-Redondo R, Montoya G [Pubmed: 38788717] [DOI: 10.1016/j.molcel.2024.05.001] |
9.9 TB | 2.99 - 3.13 Å |
| 2025-07-01 |  |
CryoEM dataset of Retron-Eco1 E106A filaments [7748 multi-frame micrographs composed of 40 frames each in MRC format] | Carabias A, Camara-Wilpert S, Mestre MR, Lopéz-Méndez B, Hendriks IA, Zhao R, Pape T, Fuglsang A, Luk SH, Nielsen ML, Pinilla-Redondo R, Montoya G [Pubmed: 38788717] [DOI: 10.1016/j.molcel.2024.05.001] |
9.7 TB | — |
| 2025-06-30 |  |
Cryo-Electron Tomography Data and Comprehensive Annotation of C. elegans Centrosomes in Interphase and Mitosis [multiple data sets in MRC and TIFF formats] | Tollervey F [Pubmed: 39721584] [DOI: 10.1016/j.devcel.2024.12.002] |
111.4 GB | 26.0 - 44.0 Å |
| 2025-06-30 |  |
TnsB strand transfer complex micrographs [4728 multi-frame micrographs composed of 1 frames each in MRC format] | Tenjo-Castaño F, Sofos N, López-Méndez B, Stutzke LS, Fuglsang A, Stella S, Montoya G [Pubmed: 36184667] [DOI: 10.1038/s41467-022-33504-5] |
7.9 TB | 2.46 Å |
| 2025-06-30 |  |
FIB-SEM Chinese Hamster Ovary cell line sample dataset [multiple data sets in TIFF and PNG formats] | Slamková D., Hurník Konečná T [DOI: 10.1016/bs.mcb.2023.04.008] |
1.3 GB | — |
| 2025-06-30 |  |
FIB-SEM Trypanosoma cruzi cell samples [multiple data sets in TIFF and PNG formats] | Slamková D., Hurník Konečná T, Sviben S | 10.8 GB | — |
| 2025-06-30 |  |
FIB-SEM Nicotiana benthamiana epidermal cell - conventional acquisition [200 reconstructed volumes in TIFF format] | Czymmek KJ, Burch-Smith T, Hurník Konečná T [DOI: 10.1016/bs.mcb.2023.04.008] |
7.5 GB | — |
| 2025-06-30 |  |
Single particle cryo-EM micrographs of ROOL RNA nanocage [multiple data sets in MRC format] | Kretsch RC, Wu Y, Shabalina SA, Lee H, Nye G, Koonin EV, Gao A, Chiu W, Das R [Pubmed: 40328315] [DOI: 10.1038/s41586-025-09073-0] |
372.0 GB | 3.1 Å |
| 2025-06-30 |  |
Single particle cryo-EM micrographs of GOLLD RNA nanocage [multiple data sets in MRC format] | Kretsch RC, Wu Y, Shabalina SA, Lee H, Nye G, Koonin EV, Gao A, Chiu W, Das R [Pubmed: 40328315] [DOI: 10.1038/s41586-025-09073-0] |
744.3 GB | 3.0 Å |
