Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2025-05-22 |  |
Cryo-ET dataset of dormant microsporidian spores from Encephalitozoon hellem [multiple data sets in MRCS and MRC formats] | Kelley K, Bhabha G, Potter CS, Carragher B, Noble AJ [Pubmed: 40067903] [DOI: 10.1073/pnas.2415233122] |
252.1 GB | — |
| 2025-05-22 |  |
Cryo-ET datasets (1 and 2) of dormant microporidian spores from Encephalitozoon intestinalis [multiple data sets in TIFF and MRC formats] | Usmani M, Coudray N, Raghu R, Ramchandani H, Bobe D, Kopylov M, Zhong ED, Ekiert DC, Bhabha G [Pubmed: 39026755] [DOI: 10.1101/2024.07.13.603322] |
1.3 TB | 44.0 - 70.0 Å |
| 2025-05-22 |  |
Cryo-ET dataset (3) of dormant microporidian spores from Encephalitozoon intestinalis [multiple data sets in TIFF and MRC formats] | Usmani M, Coudray N, Raghu R, Ramchandani H, Bobe D, Kopylov M, Zhong ED, Ekiert DC, Bhabha G [Pubmed: 39026755] [DOI: 10.1101/2024.07.13.603322] |
1.1 TB | 20.0 - 36.0 Å |
| 2025-05-22 |  |
Fib-SEM stacks for Prey (Phaeocystis antarctica) and Host (Ross Sea Dinoflagellate; RSD) [multiple data sets in TIFF format] | Rao AK, Gallet B, Jouneau PH, Decelle J [Pubmed: 40250433] [DOI: 10.1101/2024.10.20.619283] |
272.6 GB | — |
| 2025-05-21 |  |
Cryo-EM structure of human GLUT9 bound to urate [multiple data sets in TIFF format] | Matsushita D, Lee Y, Nishizawa T [Pubmed: 40186864] [DOI: 10.1016/j.celrep.2025.115514] |
2.3 TB | 3.39 Å |
| 2025-05-17 |  |
Structural mechanism of FusB-mediated rescue from fusidic acid inhibition of protein synthesis [multiple data sets in TIFF and EER formats] | Gonzalez-Lopez A, Larsson DSD, Selmer M [Pubmed: 40251147] [DOI: 10.1038/s41467-025-58902-3] |
28.2 TB | 1.87 - 2.79 Å |
| 2025-05-14 |  |
Single-particle cryo-EM of Staphylococcus aureus ribosomes inhibited by fusidic acid and fusidic acid cyclopentane [multiple data sets in EER, TIFF and MRC formats] | González-López A, Larsson DSD, Selmer M [Pubmed: 38902339] [DOI: 10.1038/s41598-024-64868-x] |
11.1 TB | 2.02 - 2.49 Å |
| 2025-05-13 |  |
Micrographs of carvedilol-B1AR-arrestin2-V2Rpp complex [29650 multi-frame micrographs composed of 729 frames each in EER format] | Tatli M, Abiko LA, Petrovic I, Stahlberg H, Grzesiek S, Desai S, Spang A | 9.5 TB | 6.5 Å |
| 2025-05-10 |  |
Unaligned multi-frame micrographs of DNA polymerase theta with 3′-overhang DNA with 9-nt polyT and 6-nt MH sequence [10005 multi-frame micrographs composed of 50 frames each in TIFF format] | Ito F, Li Z, Khant HA, Chen XS [Pubmed: 40253368] [DOI: 10.1038/s41467-025-58441-x] |
2.7 TB | 3.1 Å |
| 2025-05-10 |  |
SPG11-SPG15 [9699 micrographs in MRC format] | Mai X., Su M.-Y., Stjepanovic G. [Pubmed: 40175557] [DOI: 10.1038/s41594-025-01500-0] |
851.6 GB | 4.02 Å |
| 2025-05-09 |  |
Apoferritin dataset collected on Tecnai G2 spirit 120kV LaB6 electron microscope fitted with Gatan Alpine camera. [923 multi-frame micrographs composed of 52 frames each in TIFF format] | Venugopal H, Ramm G | 175.9 GB | 2.65 Å |
| 2025-05-09 |  |
Unaligned multi-frame micrographs of DNA polymerase theta with 3′-overhang DNA with 15-nt polyT [7228 multi-frame micrographs composed of 50 frames each in TIFF format] | Ito F, Li Z, Khant HA, Chen XS [Pubmed: 40253368] [DOI: 10.1038/s41467-025-58441-x] |
2.1 TB | 3.2 Å |
| 2025-05-09 |  |
Unaligned multi-frame micrographs of DNA polymerase theta helicase domain, apo-form [4511 multi-frame micrographs composed of 2130 frames each in EER format] | Ito F, Li Z, Khant HA, Chen XS [Pubmed: 40253368] [DOI: 10.1038/s41467-025-58441-x] |
5.0 TB | 3.5 - 3.6 Å |
| 2025-05-09 |  |
Molecular architecture of thylakoid membranes within intact spinach chloroplasts [multiple data sets in TIFF and MRC formats] | Wietrzynski W, Johnson MP, Engel BD [DOI: 10.1101/2024.11.24.625035] |
303.9 GB | — |
| 2025-05-09 |  |
Structural insights into transcriptional regulation by the helicase RECQL5 [6190 multi-frame micrographs composed of 40 frames each in TIFF format] | Florez Ariza AJ, Lue NZ, Grob P, Kaeser B, Fang J, Kassube SA, Nogales E [Pubmed: 39975028] [DOI: 10.1101/2025.01.29.634372] |
2.8 TB | 2.6 - 3.2 Å |
| 2025-05-08 |  |
Pre-reduction condition dataset for Bacillus subtilis class Ib ribonucleotide reductase [4410 multi-frame micrographs composed of 50 frames each in TIFF format] | Xu D, Thomas WC, Burnim AA, Ando N [Pubmed: 40075098] [DOI: 10.1038/s41467-025-57735-4] |
1.3 TB | 2.76 - 8.11 Å |
| 2025-05-08 |  |
Cryo-EM movies of human cardiac sodium channel [4967 multi-frame micrographs composed of 61 frames each in TIFF format] | Rupam RB | 2.5 TB | 3.6 - 3.9 Å |
| 2025-05-04 |  |
Structural basis for translational control by the human 48S initiation complex [multiple data sets in MRC and MRCS formats] | Petrychenko V, Yi SH, Liedtke D, Peng BZ, Rodnina MV, Fischer N [Pubmed: 39289545] [DOI: 10.1038/s41594-024-01378-4] |
— | 2.9 - 3.7 Å |
| 2025-05-02 |  |
E. coli GroEL [1286 micrographs in MRC format] | Godek J, Sivinski J, Watson ER, Lebario F, Stevens M, Zerio CJ, Ambrose AJ, Zhu X, Trindl CA, Johnson SM, Lander GC, Chapman E [Pubmed: 39041457] [DOI: 10.1021/jacs.4c05057] |
68.2 GB | 3.41 Å |
| 2025-04-24 |  |
Single particle cryo-EM of ASCT2 in lipid nanodiscs with bound glutamine and Na+ ions [multiple data sets in TIFF format] | Borowska AM, Rheinberger J, Paulino C, Slotboom DJ [Pubmed: 39095408] [DOI: 10.1038/s41467-024-50888-8] |
3.4 TB | 2.6 - 2.9 Å |
| 2025-04-24 |  |
Single particle cryo-EM of ASCT2 in lipid nanodiscs under Na+-depleted conditions [multiple data sets in TIFF format] | Borowska AM, Rheinberger J, Paulino C, Slotboom DJ [Pubmed: 39095408] [DOI: 10.1038/s41467-024-50888-8] |
715.2 GB | 2.9 - 3.0 Å |
| 2025-04-24 |  |
cryoEM structure of Gq-coupled MRGPRX4 with fospropofol bound [6108 micrographs in MRC format] | Cao C, Fay JF, Roth BL, Chien DC, Dong X, Limjunyawong N [Pubmed: 38718132] [DOI: 10.1126/scitranslmed.adk8198] |
536.3 GB | 3.14 Å |
| 2025-04-24 |  |
Human pseudouridine synthase 3 (PUS3 wild type) [11944 multi-frame micrographs composed of 40 frames each in TIFF format] | Koziej L, Lin T-Y, Glatt S, Jezowski J [Pubmed: 38996458] [DOI: 10.1016/j.molcel.2024.06.013] |
4.4 TB | 4.02 Å |
| 2025-04-24 |  |
Human pseudouridine synthase 3 (PUS3 R116A) [7980 multi-frame micrographs composed of 40 frames each in TIFF format] | Koziej L, Lin T-Y, Glatt S, Jezowski J [Pubmed: 38996458] [DOI: 10.1016/j.molcel.2024.06.013] |
3.1 TB | 4.49 Å |
| 2025-04-24 |  |
Human pseudouridine synthase 3 (PUS3 K119A) [8292 multi-frame micrographs composed of 40 frames each in TIFF format] | Koziej L, Lin T-Y, Glatt S, Jezowski J [Pubmed: 38996458] [DOI: 10.1016/j.molcel.2024.06.013] |
3.2 TB | 5.15 Å |
