Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2025-04-24 |  |
Ensemble cryo-EM reveals conformational states of the nsp13 helicase replication-transcription complex [multiple data sets in TIFF format] | Chen J, Wang Q, Malone B, Llewellyn E, Pechersky Y, Maruthi K, Eng ET, Perry JK, Campbell EA, Shaw DE, Darst SA [Pubmed: 35260847] [DOI: 10.1038/s41594-022-00734-6] |
5.3 TB | 2.91 - 3.6 Å |
| 2025-04-24 |  |
Cryo-EM of SARS-CoV-2 pre-incorporation replication-transcription complex with UTP [30850 multi-frame micrographs composed of 40 frames each in TIFF format] | Malone BF, Perry JK, Olinares PDB, Lee HW, Chen J, Appleby TC, Feng JY, Bilello JP, Ng H, Sotiris J, Ebrahim M, Chua EYD, Mendez JH, Eng ET, Landick R, Götte M, Chait BT, Campbell EA, Darst SA [Pubmed: 36725929] [DOI: 10.1038/s41586-022-05664-3] |
8.1 TB | 3.13 Å |
| 2025-04-24 |  |
Cryo-EM of SARS-CoV-2 pre-incorporation replication-transcription complex with CTP [4527 multi-frame micrographs composed of 50 frames each in TIFF format] | Malone BF, Perry JK, Olinares PDB, Lee HW, Chen J, Appleby TC, Feng JY, Bilello JP, Ng H, Sotiris J, Ebrahim M, Chua EYD, Mendez JH, Eng ET, Landick R, Götte M, Chait BT, Campbell EA, Darst SA [Pubmed: 36725929] [DOI: 10.1038/s41586-022-05664-3] |
4.2 TB | 2.67 Å |
| 2025-04-24 |  |
Cryo-EM of SARS-CoV-2 nsp13-replication-transcription complex (nsp13-RTC) (no detergent) [4358 multi-frame micrographs composed of 50 frames each in TIFF format] | Chen J, Malone B, Llwewllyn E, Grasso M, Shelton PMM, Olinares PDB, Maruthi K, ENG ET, Vatandaslar H, Chait BT, Kapoor TM, Darst SA, Campbell EA [Pubmed: 32783916] [DOI: 10.1038/s41586-020-2368-8] |
3.2 TB | 3.6 Å |
| 2025-04-23 |  |
Pre-catalytic complex micrographs [935 multi-frame micrographs composed of 40 frames each in MRC format] | Tenjo-Castaño F, Sofos N, López-Méndez B, Stutzke LS, Fuglsang A, Stella S, Montoya G [Pubmed: 36184667] [DOI: 10.1038/s41467-022-33504-5] |
604.7 GB | 11.2 Å |
| 2025-04-23 |  |
Cryo-EM micrographs of TIGR-TasR in complex with tigRNA and target DNA after DNA cleavage [14257 multi-frame micrographs composed of 40 frames each in TIFF format] | Faure G, Saito M, Wilkinson ME, Quinones-Olvera N, Xu P, Flam-Shepherd D, Kim S, Reddy N, Zhu S, Evgeniou L, Koonin EV, Macrae RK, Zhang F [Pubmed: 40014690] [DOI: 10.1126/science.adv9789] |
1.9 TB | 3.05 Å |
| 2025-04-20 |  |
Cryo-EM micrographs of Vipp1-F197K/L200K helical filaments (Vipp1-F197K/L200K) [30314 multi-frame micrographs composed of 44 frames each in TIFF format] | Naskar S, Low HH [Pubmed: 39528797] [DOI: 10.1038/s41594-024-01401-8] |
14.1 TB | 3.67 Å |
| 2025-04-15 |  |
Transporter associated with antigen processing (TAP) bound to the 9-mer peptide QYDDAVYKL [26318 multi-frame micrographs composed of 30 frames each in TIFF format] | Lee J, Oldham ML, Manon V, Chen J [Pubmed: 38805290] [DOI: 10.1073/pnas.2320879121] |
8.8 TB | 3.5 Å |
| 2025-04-15 |  |
Product condition dataset for Bacillus subtilis class Ib ribonucleotide reductase [3503 multi-frame micrographs composed of 50 frames each in TIFF format] | Xu D, Thomas WC, Burnim AA, Ando N [Pubmed: 40075098] [DOI: 10.1038/s41467-025-57735-4] |
1.1 TB | 2.55 - 4.2 Å |
| 2025-04-14 |  |
3x3 tiled montage tomogram of a yeast lamella imaged with a square electron beam [279 tilt series in TIFF format] | Chua EYD, Alink LM, Kopylov M, Johnston J, Eisenstein F, de Marco A [Pubmed: 38238558] [DOI: 10.1038/s41592-023-02161-x] |
58.4 GB | — |
| 2025-04-14 |  |
Cryo electron microscopy of in vitro assembled NC-4 cages [28 multi-frame micrographs composed of 1 frames each in MRC format] | Hori M, Steinauer A, Tetter S, Hälg J, Manz EM, Hilvert D [Pubmed: 38678040] [DOI: 10.1038/s41467-024-47808-1] |
1016.9 GB | 3.5 Å |
| 2025-04-10 |  |
CryoEM of Tropomyosin-receptor kinase fused gene protein (TRK-fused gene protein; TFG) Low Complexity Domain (residues 237-327) P285L mutant, amyloid fibers [7921 multi-frame micrographs composed of 40 frames each in TIFF format] | Rosenberg GM, Abskharon R, Boyer DR, Ge P, Sawaya MR, Eisenberg DS [Pubmed: 38077690] [DOI: 10.1093/pnasnexus/pgad402] |
3.5 TB | 2.59 Å |
| 2025-04-09 |  |
Human pseudouridine synthase 3 (PUS3 R116A mutant) and tRNA-Gln [8393 multi-frame micrographs composed of 40 frames each in TIFF format] | Koziej L, Lin T-Y, Glatt S, Jezowski J [Pubmed: 38996458] [DOI: 10.1016/j.molcel.2024.06.013] |
3.2 TB | 2.66 - 3.36 Å |
| 2025-04-09 |  |
Human pseudouridine synthase 3 (PUS3 D118A mutant) and tRNA-Arg [8736 multi-frame micrographs composed of 41 frames each in TIFF format] | Koziej L, Lin T-Y, Glatt S, Jezowski J [Pubmed: 38996458] [DOI: 10.1016/j.molcel.2024.06.013] |
3.3 TB | 3.15 Å |
| 2025-04-09 |  |
Human pseudouridine synthase 3 (PUS3 D118A mutant) and pre-tRNA-Arg [8673 multi-frame micrographs composed of 40 frames each in TIFF format] | Koziej L, Lin T-Y, Glatt S, Jezowski J [Pubmed: 38996458] [DOI: 10.1016/j.molcel.2024.06.013] |
3.3 TB | 2.97 Å |
| 2025-04-09 |  |
CryoEM structure of cyclised H-pilus [multiple data sets in TIFF format] | Ishimoto N, Beis K | 112.8 GB | 2.24 Å |
| 2025-04-09 |  |
Cryo-EM of RNAP post-terminal complexes bound to RapA+ADP+AlF3 on negatively supercoiled DNA [multiple data sets in TIFF format] | Brewer JJ, Inlow K, Mooney RA, Bosch B, Olinares PDB, Marcelino LP, Chait BT, Landick R, Gelles J, Campbell EA, Darst SA [Pubmed: 39779919] [DOI: 10.1038/s41594-024-01447-8] |
1.7 TB | 3.62 Å |
| 2025-04-09 |  |
Cryo-EM of SARS-CoV-2 nsp13-replication-transcription complex (nsp13-RTC) [4358 multi-frame micrographs composed of 50 frames each in TIFF format] | Chen J, Malone B, Llwewllyn E, Grasso M, Shelton PMM, Olinares PDB, Maruthi K, ENG ET, Vatandaslar H, Chait BT, Kapoor TM, Darst SA, Campbell EA [Pubmed: 32783916] [DOI: 10.1016/j.cell.2020.07.033] |
1.3 TB | 3.5 - 7.9 Å |
| 2025-04-09 |  |
Cryo-EM of SARS-SoV-2 pre-incorporation replication-transcription complex with GTP [4527 multi-frame micrographs composed of 50 frames each in TIFF format] | Malone BF, Perry JK, Olinares PDB, Lee HW, Chen J, Appleby TC, Feng JY, Bilello JP, Ng H, Sotiris J, Ebrahim M, Chua EYD, Mendez JH, Eng ET, Landick R, Götte M, Chait BT, Campbell EA, Darst SA [Pubmed: 36725929] [DOI: 10.1038/s41586-022-05664-3] |
2.4 TB | 2.68 Å |
| 2025-04-09 |  |
CryoEM structural characterization of α-Synuclein Oligomers in complex with PSMa3 peptide [stack of 135393 particles in MRCS format] | Santos J, Cuellar J, Pallarès I, Valpuesta JM, Ventura S [Pubmed: 38683963] [DOI: 10.1021/jacs.4c02262] |
17.8 GB | 18.3 Å |
| 2025-04-07 |  |
Single cell chemistry of photoactivatable platinum anticancer complexes [multiple data sets in MRC and TIFF formats] | Bolitho EM, Sanchez-Cano C, Shi H [Pubmed: 34808054] [DOI: 10.1021/jacs.1c08630] |
43.9 GB | — |
| 2025-04-07 |  |
Cryo-EM Structure of an Enterobacter GH43 Beta-Xylosidase [10176 micrographs in MRC format] | Godoy AS, Briganti L, Polikarpov I | 1.3 TB | 2.65 Å |
| 2025-04-07 |  |
Cryo-EM structure of the D87G lysozyme amyloid fibril [2013 multi-frame micrographs composed of 40 frames each in TIFF format] | Karimi-Farsijani S, Schmidt M, Fändrich M [Pubmed: 39511224] [DOI: 10.1038/s41467-024-54091-7] |
351.2 GB | 2.8 Å |
| 2025-04-07 |  |
Single-particle cryo-EM dataset of the glycosyltransferase ArnC from Salmonella enterica in the UDP-bound state from Talos Arctica microscope [multiple data sets in TIFF and MRC formats] | Ashraf KU, Punetha A, Kaelber JT, Petrou VI [Pubmed: 39974898] [DOI: 10.1101/2025.01.29.634835] |
1.9 TB | 2.96 Å |
| 2025-04-07 |  |
Micrographs of S.cerevisiae pre-60S particles (Nsa1-Tap) of usnic acid treated and untreated cells. [7595 micrographs in MRC format] | Bergler H [Pubmed: 39209816] [DOI: 10.1038/s41467-024-51754-3] |
667.2 GB | 2.6 - 3.4 Å |
