Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
Currently, due to a storage failure, some datasets are either inaccessible or incomplete (Marked: Incomplete dataset).
We are restoring them in ascending order of EMPIAR-ID.
If there are any entries mirrored on PDBj that are particularly urgent, we are accepting requests (email, inquiry).
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2026-11-12 |  |
Cryo-electron micrographs used in SPA reconstruction of translating Escherichia coli 70S ribosome bound to mRNA, P-site QKF-peptidyl-tRNAPhe, glycyl-tRNAGly in A/T conformation, EF-Tu-GDP, and bottromycin at 2.01A resolution [multiple data sets in TIFF and MRC formats] | Travin DY, Basu RS, Paranjpe M, Polikanov YS, Gagnon MG | 3.2 TB | 2.01 Å |
| 2026-11-12 |  |
Cryo-electron micrographs used in SPA reconstruction of Escherichia coli 70S ribosome bound to mRNA, P-site fMet-tRNAfMet, glycyl-tRNAGly in A/T conformation, EF-Tu-GDPCP, and bottromycin at 1.99 A resolution [multiple data sets in TIFF and MRC formats] | Travin DY, Basu RS, Paranjpe M, Polikanov YS, Gagnon MG | 1.9 TB | 1.99 Å |
| 2026-11-12 |  |
Structural mechanism of programmable gene integration by the R2 retrotransposon coupled with CRISPR-Cas9 [multiple data sets in TIFF format] | Komatsu D, Hiraizumi M, Fujimatsu K, Yamada S, Yamashita K [Pubmed: 42951937] [DOI: 10.1038/s41594-026-01903-7] |
9.8 TB | 2.19 - 3.3 Å |
| 2026-11-12 |  |
Rabbit ryanodine receptor type 1 complexed with FKBP12.6, calmodulin, dantrolene, ADP, 4-chloro-m-cresol, and caffeine [3928 multi-frame micrographs composed of 50 frames each in TIFF format] | Kim K, Clarke OB [Pubmed: 42838934] [DOI: 10.1038/s41467-026-76519-y] |
963.7 GB | 2.14 - 2.58 Å |
| 2026-11-12 |  |
Rabbit ryanodine receptor type 1 complexed with FKBP12.6 and calmodulin in the presence of physiological concentrations of ATP, ADP, and Mg2+ [3556 multi-frame micrographs composed of 50 frames each in TIFF format] | Kim K, Clarke OB [Pubmed: 42838934] [DOI: 10.1038/s41467-026-76519-y] |
921.8 GB | 2.26 - 3.18 Å |
| 2026-11-12 |  |
Rabbit ryanodine receptor type 1 complexed with FKBP12.6 and calmodulin in the presence of ATP, ADP, and Mg2+ at concentrations mimicking muscle fatigue [5405 multi-frame micrographs composed of 50 frames each in TIFF format] | Kim K, Clarke OB [Pubmed: 42838934] [DOI: 10.1038/s41467-026-76519-y] |
1.4 TB | 1.99 - 2.32 Å |
| 2026-11-12 |  |
CryoEM movies of Mo-nitrogenase and FeSII from Azotobacter vinelandii in presence of sodium dithionite frozen under Al's oil [multiple data sets in EER and MRC formats] | Narehood SM, Cook BD, Srisantitham S, Eng VH, Shiau AA, McGuire KL, Britt RD, Herzik Jr MA, Tezcan FA [Pubmed: 39779844] [DOI: 10.1038/s41586-024-08311-1] |
796.8 GB | 2.67 Å |
| 2026-11-12 |  |
cryo-EM structure of the E. coli RNA polymerase-E. coli RNA polymerase head-on collision [20080 multi-frame micrographs composed of 35 frames each in TIFF format] | Watters JW, Alushin GM, Liu S [DOI: 10.64898/2026.04.06.716678] |
6.7 TB | 2.62 - 2.93 Å |
| 2026-11-12 |  |
Cryo electron tomography of in vitro vaccinia virus cores [66 tilt series in MRC format] | Liu J, Schafer S, Lehnung S, Baumann L, Muhlberg L, Steiner C, Schreiber M, Linder M, Welsch S, Liu F, Bogdanow B, Krijnse Locker J, Turonova B [Pubmed: 42963376] [DOI: 10.1038/s41467-026-79013-7] |
97.5 GB | 11.3 Å |
| 2026-11-12 |  |
Cryo-EM structure of AGAP001487 in nanodisc [7580 multi-frame micrographs composed of 50 frames each in TIFF format] | Kawaguchi S, Nakano T, Hirano H, Watanabe M, Suzuki S, Nishikawa K, Fujiyoshi Y, Oshima A [Pubmed: 43008025] [DOI: 10.1073/pnas.2627957123] |
1.5 TB | 3.0 Å |
| 2026-11-12 |  |
Cryo-EM structure of an N-terminal deletion mutant of AGAP001487 in nanodisc [11509 multi-frame micrographs composed of 50 frames each in TIFF format] | Kawaguchi S, Nakano T, Hirano H, Watanabe M, Suzuki S, Nishikawa K, Fujiyoshi Y, Oshima A [Pubmed: 43008025] [DOI: 10.1073/pnas.2627957123] |
2.5 TB | 2.76 Å |
| 2026-11-12 |  |
Abeta fibrils from 5xFAD mice [stack of 2346 particles in TIFF format] | Song MN, Cao Q [Pubmed: 41519857] [DOI: 10.1186/s13024-026-00924-6] |
265.2 GB | 3.5 Å |
| 2026-11-09 |  |
Single-particle cryo-EM of amyloidogenic antimicrobial peptide Brevinin-1OKc in milliQ-water [10018 multi-frame micrographs composed of 52 frames each in TIFF format] | Ragonis-Bachar PRB, Strati FS, Gustavsson EG, Khokhlov AK, Barnea EB, Rayan BR, Upchr AU, Landau ML | 4.5 TB | 3.3 Å |
| 2026-11-09 |  |
Single particle cryo-EM amylodogeneic antimicrobial peptide Aurein 1.2 [14574 multi-frame micrographs composed of 50 frames each in TIFF format] | Ragonis-Bachar PRB, Strati FS, Gustavsson EG, Khokhlov AK, Barnea EB, Rayan BR, Upchr AU, Landau ML | 5.4 TB | 2.8 - 3.78 Å |
| 2026-11-09 |  |
Single-particle cryo-EM of amyloidogenic antimicrobial peptide Brevinin-1OKc in PBS pH 6.5 [6236 multi-frame micrographs composed of 47 frames each in TIFF format] | Ragonis-Bachar PRB, Strati FS, Gustavsson EG, Khokhlov AK, Barnea EB, Rayan BR, Upchr U, Landau ML | 2.9 TB | 2.17 Å |
| 2026-11-09 |  |
Single Particle Cryo-EM of Nucleosome scFv complex with a nick at SHL +5.3 [8046 multi-frame micrographs composed of 48 frames each in TIFF format] | Kim TH [Pubmed: 42831429] [DOI: 10.1093/nar/gkag939] |
3.7 TB | 1.99 Å |
| 2026-11-09 |  |
Single-particle cryo-EM data of GT-C O-Mannosyltransferase TMEM260 incubated with Far-P-Man [12964 multi-frame micrographs composed of 1 frames each in TIFF format] | CIfuente JO, Ochoa de Eribe Lizarralde B, Tascón I, López-Alonso JP, Ubarretxena-Belandia I | 7.4 TB | 2.65 Å |
| 2026-11-09 |  |
Cryo-EM structure of the human RNF170-Erlin1-Erlin2 complex [2637 multi-frame micrographs composed of 32 frames each in TIFF format] | Jia XX, Liu GY, Li HW, Qian HW [Pubmed: 41481136] [DOI: 10.1093/jmcb/mjaf060] |
1.1 TB | 3.05 Å |
| 2026-11-09 |  |
Cryo-EM structure of the LB_DQB0602_B Fab - HLA-DQB1*06:02/DQA1*01:02 human alloantibody-HLA complex [12819 multi-frame micrographs composed of 40 frames each in TIFF format] | Zampieri V, Priddey A, Kosmoliaptsis V, Marquez JA | 2.9 TB | 2.74 Å |
| 2026-11-09 |  |
Cryo-EM structure of the LB_DQB0301_A - HLA-DQB1*03:01/DQA1*05:02 human alloantibody-HLA complex [16852 multi-frame micrographs composed of 40 frames each in TIFF format] | Zampieri V, Priddey A, Kosmoliaptsis V, Marquez JA | 3.9 TB | 2.9 Å |
| 2026-11-09 |  |
Cryo-EM structure of the LB_DQB0303_A – HLADQB1*03:03/ DQA1*02:01 human alloantibody-HLA complex [multiple data sets in TIFF format] | Zampieri V, Priddey A, Linares R, Kosmoliaptsis V, Marquez JA | 7.0 TB | 2.74 Å |
| 2026-11-09 |  |
Cryo-EM of Pseudomonas phage LUZ19 [multiple data sets in MRC, TIFF and EER formats] | Štefánik Sobotková A, Cieniková Z, Mironova Y, Hlavenková Z, Plevka P | 1.8 TB | 3.06 - 4.01 Å |
| 2026-11-09 |  |
Raw cryoEM movies for Mo-nitrogenase catalytic subunit (MoFeP) from Gluconacetobacter diazotrophicus [multiple data sets in EER and MRC formats] | Yizhou YL, Narehood SMN, Herzik MAH [Pubmed: 42390130] [DOI: 10.1021/acs.biochem.6c00360] |
2.1 TB | 2.15 Å |
| 2026-11-09 |  |
Raw cryoEM movies for Mo-nitrogenase complex from Gluconacetobacter diazotrophicus in the presence of 5 mM beryllium fluoride [multiple data sets in EER and MRC formats] | Yizhou YL, Narehood SMN, Cook BDC, Herzik MAH [Pubmed: 42390130] [DOI: 10.1021/acs.biochem.6c00360] |
2.4 TB | 2.73 Å |
| 2026-11-09 |  |
Raw cryoEM movies for Mo-nitrogenase Av MoFeP with Gd FeP in the presence of 5 mM beryllium fluoride [multiple data sets in EER and MRC formats] | Yizhou YL, Narehood SMN, Cook BDC, Herzik MAH [Pubmed: 42390130] [DOI: 10.1021/acs.biochem.6c00360] |
2.0 TB | 2.22 Å |
