EMPIAR-12662 - FIB-SEM Nicotiana benthamiana epidermal cell - conventional acquisition [200 reconstructed volumes in TIFF format]

EMPIAR-12662

FIB-SEM Nicotiana benthamiana epidermal cell - conventional acquisition [200 reconstructed volumes in TIFF format]

Publication:

A conventional fixation volume electron microscopy protocol for plants

Wickramanayake J, Czymmek KJ

Methods in Cell Biology (---)

DOI: 10.1016/bs.mcb.2023.04.008

Related EMDB entry:

Deposited:

2025-04-02

Released:

2025-06-30

Last modified:

2025-06-30

Imageset size:

7.49 GB

Imageset DOI:

10.6019/EMPIAR-12662

Experimental metadata:

Download xml json

Contains:

reconstructed volumes

Image Sets

1. FIB-SEM Nicotiana benthamiana epidermal cell dataset

Category:

reconstructed volumes

Image format:

TIFF

No. of images or tilt series:

200

Image size:

(10208, 3925)

Pixel type:

UNSIGNED BYTE

Pixel spacing:

(6.0, 6.0)

Details:

High resolution images

Files:

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Citations

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He L, Bartesaghi A. (2026)

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Chart builder: an interactive tool for user driven data visualization in the electron microscopy data bank.

Fonseca N, Duraisamy AK, Wang Z, Somasundharam S, Tayebinia M, de Oliveira LC, Ma M, Turner J, Patwardhan A, Kleywegt GJ, Hartley M, Morris KL. (2026)

CryoVirusDB: An Annotated Dataset for AI-Based Virus Particle Identification in Cryo-EM Micrographs.

Gyawali R, Dhakal A, Wang L, Cheng J. (2026)

Deep-learning methods for contrast enhancement and artifact reduction in cryo-electron tomography: a systematic analysis of the state of the art and proposed improvements.

Jones HN, Deshmukh A, Pande K. (2026)

CryoGS: High-Quality Cryo-EM Homogeneous Reconstruction by Gaussian Splatting

Zeng B, Liu S, Cheng S, Xu G, Fan H. (2026)

Point cloud deformation modeling for particle selection following cryo-EM 2D classification.

Wang X, Mo Z, Li F, Zhang F, Wan X. (2026)

ICECREAM: high-fidelity equivariant cryo-electron tomography.

Kishore V, Debarnot V, Righetto RD, Engel BD, Dokmanić I. (2026)

CryoSift: an accessible and automated CNN-driven tool for cryo-EM 2D class selection.

Schäfer JH, Calza A, Hom K, Damodar P, Peng R, Bogdanović N, Lander GC, Stagg SM, Cianfrocco MA. (2025)