Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2025-12-06 |  |
CryoEM of E. coli RNA polymerase Sigma N transcription initiation intermediates [multiple data sets in TIFF, MRC and MRCS formats] | Mueller AU, Molina N, Nixon BT, Darst SA [Pubmed: 40759887] [DOI: 10.1038/s41467-025-61837-4] |
10.5 TB | 2.6 - 3.1 Å |
| 2025-12-05 |  |
CryoEM of mycobacterial open-gate proteasome complexed with engineered bacterial enhancer binding protein (bEBP) [multiple data sets in TIFF and MRC formats] | Mueller AU, Molina N, Nixon BT, Darst SA [Pubmed: 40759887] [DOI: 10.1038/s41467-025-61837-4] |
479.4 GB | 4.6 Å |
| 2025-12-03 |  |
Human polymerase epsilon bound to PCNA and DNA with an in-situ-generated mismatch [18426 multi-frame micrographs composed of 50 frames each in TIFF format] | Wang FW [Pubmed: 40440070] [DOI: 10.1073/pnas.2507232122] |
13.4 TB | 3.11 - 3.6 Å |
| 2025-12-03 |  |
Human VDAC1 in cMSP1delH5 circularized nanodiscs. [multiple data sets in EER and MRC formats] | Broutzakis G, Gatsogiannis C [Pubmed: 41145501] [DOI: 10.1038/s41467-025-65363-1] |
4.4 TB | 5.73 Å |
| 2025-12-03 |  |
GLIC in MSP1E3D1 nanodisc at pH 4.0 [14076 multi-frame micrographs composed of 1953 frames each in EER format] | Li Z, Bharambe N, Manishrao Lande K, Feddersen B, Manikkoth Balakrishna A, Biggin PC, Sahu G, Basak S [Pubmed: 38580666] [DOI: 10.1038/s41467-024-47370-w] |
10.2 TB | 2.74 - 3.45 Å |
| 2025-12-03 |  |
GLIC Y251A mutant in MSP1E3D1 nanodisc at pH 2.5 [10188 multi-frame micrographs composed of 1251 frames each in EER format] | Li Z, Bharambe N, Manishrao Lande K, Feddersen B, Manikkoth Balakrishna A, Biggin PC, Sahu G, Basak S [Pubmed: 41129221] [DOI: 10.1073/pnas.2512811122] |
6.2 TB | 2.87 Å |
| 2025-12-03 |  |
GLIC F116A mutant in MSP1E3D1 nanodisc at pH 2.5 [11131 multi-frame micrographs composed of 1575 frames each in EER format] | Li Z, Bharambe N, Manishrao Lande K, Feddersen B, Manikkoth Balakrishna A, Biggin PC, Sahu G, Basak S [Pubmed: 41129221] [DOI: 10.1073/pnas.2512811122] |
7.3 TB | 2.14 Å |
| 2025-12-01 |  |
Integrin alpha-5 beta-1 in complex with MINT1526a Fab [multiple data sets in TIFF, MRC and MRCS formats] | Nguyen AN, Campbell MGC [Pubmed: 39829743] [DOI: 10.1101/2025.01.08.631572] |
3.1 TB | 2.7 Å |
| 2025-12-01 |  |
Human VDAC1 in cMSP1D1 circularized nanodiscs, monomeric form. [multiple data sets in EER and MRC formats] | Broutzakis G, Gatsogiannis C [Pubmed: 41145501] [DOI: 10.1038/s41467-025-65363-1] |
2.2 TB | 7.21 Å |
| 2025-12-01 |  |
Human VDAC1 in cMSP1D1 circularized nanodiscs, dimeric form. [multiple data sets in EER and MRC formats] | Broutzakis G, Gatsogiannis C [Pubmed: 41145501] [DOI: 10.1038/s41467-025-65363-1] |
2.2 TB | 6.99 Å |
| 2025-11-30 |  |
Cryo-EM micrographs of R2Tg retrotransposon initiating target-primed reverse transcription [10628 multi-frame micrographs composed of 40 frames each in TIFF format] | Wilkinson ME, Zhang F [Pubmed: 40603868] [DOI: 10.1038/s41467-025-61321-z] |
1.7 TB | 3.2 Å |
| 2025-11-30 |  |
Tyrocidine synthetase modules 1 and 2 crosslinked in the condensation state, complex A [3636 multi-frame micrographs composed of 1512 frames each in EER format] | Heberlig GW, La Clair JJ, Burkart MD [Pubmed: 39663458] [DOI: 10.1038/s41586-024-08306-y] |
2.8 TB | 2.97 Å |
| 2025-11-25 |  |
Source data for AI-directed voxel extraction and volume EM identify intrusions as sites of mitochondrial contact [multiple data sets in TIFF format] | Padman BS, Lindblom R, Lazarou M [DOI: 10.1083/jcb.202411138] |
32.8 GB | — |
| 2025-11-24 |  |
Structural mechanism of the Retron-Eco7 anti-phage defense system [7847 multi-frame micrographs composed of 50 frames each in TIFF format] | Ishikawa J, Yoneyama K, Yamashita K, Nishimasu H | 1.7 TB | 2.58 - 2.76 Å |
| 2025-11-21 |  |
Single-particle cryo electron microscopy of Integrin a4b7 bound to MadCAM-1 [multiple data sets in TIFF, MRC and MRCS formats] | Hollis JA, Campbell MG [Pubmed: 40929264] [DOI: 10.1126/sciadv.adx9567] |
3.5 TB | 3.05 Å |
| 2025-11-21 |  |
GLIC in MSP1E3D1 nanodisc at pH 2.5 [6449 multi-frame micrographs composed of 60 frames each in TIFF format] | Bharambe N, Li Z, Seiferth D, Balakrishna AM, Biggin PC, Basak S [Pubmed: 38580666] [DOI: 10.1038/s41467-024-47370-w] |
3.5 TB | 2.6476 Å |
| 2025-11-21 |  |
Cryo Electron Microscopy of hIAPP and rIAPP fibrils in different aggregation solutions [stack of 1200 particles in MRCS format] | Valli DV, Maj MM [DOI: 10.1021/acs.biochem.5c00042] |
737.2 GB | — |
| 2025-11-20 |  |
Cryo-electron microscopy of LetAB from Escherichia coli [multiple data sets in TIFF format] | Santarossa CC, Ekiert DC, Bhabha G [Pubmed: 40166208] [DOI: 10.1101/2025.03.21.644421] |
6.2 TB | 2.9 - 3.5 Å |
| 2025-11-19 |  |
Single-particle cryo electron microscopy of Integrin aEb7 bound to E-cadherin EC12 [multiple data sets in TIFF, MRC and MRCS formats] | Hollis JA, Campbell MG [Pubmed: 40929264] [DOI: 10.1126/sciadv.adx9567] |
10.8 TB | 3.37 Å |
| 2025-11-19 |  |
RNAP-TopoI complex on long-overhang scaffold [multiple data sets in TIFF and MRC formats] | Vidmar VV, Lamour VL, Weixlbaumer AW | 2.5 TB | 3.9 - 5.6 Å |
| 2025-11-19 |  |
Single particle cryo-EM of Norovirus NS3 in complex with ATP-gamma-S [multiple data sets in EER, MRC and MRCS formats] | Haas M, Drulyte I, Hurdiss DL [DOI: 10.1101/2025.06.17.659504] |
725.7 GB | 2.9 Å |
| 2025-11-19 |  |
Single particle cryo-EM dataset of CoREST complex bound to U2AF2 [12845 multi-frame micrographs composed of 1170 frames each in EER format] | Hicks CW, Alani RM [Pubmed: 39713349] [DOI: 10.1101/2024.12.12.627852] |
7.0 TB | 5.14 Å |
| 2025-11-19 |  |
Structure of the RhGB07 Prefusion, Closed-state trimeric spike protein [7842 multi-frame micrographs composed of 1 frames each in MRC format] | Ni D, Lau K, Ekundayo B [DOI: 10.1101/2025.09.03.673949] |
490.1 GB | 2.97 Å |
| 2025-11-19 |  |
CryoEM data of alpha-synuclein fibril induced by psychosine [1642 multi-frame micrographs composed of 1 frames each in EER format] | Jenkins RA, Sawaya MR, Sun C, Rodriguez JA [Pubmed: 41000844] [DOI: 10.1101/2025.09.12.675751] |
1.0 TB | 2.72 Å |
| 2025-11-19 |  |
CryoEM structure of methylmalonic acid semialdehyde dehydrogenase from Burkholderia cenocepacia at 2.38A resolution [4643 multi-frame micrographs composed of 99 frames each in TIFF format] | Abendroth J, Davies D.R., Yang M., Horanyi P.S., Lorimer D.D., Edwards T.E. | 1.8 TB | 2.38 Å |
