Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2024-07-19 |  |
ACE2 on GSAMs [2448 multi-frame micrographs composed of 32 frames each in MRC format] | Liu N, Xu J, Wang HW | 613.1 GB | 3.9 Å |
| 2024-07-19 |  |
Particle stacks from heart-derived AL amyloid (AL59) cryo-EM data [multiple data sets in MRCS format] | Schulte T, Speranzini V, Chaves-Sanjuan A, Milazzo M, Ricagno S | 130.1 GB | 3.6 Å |
| 2024-07-18 |  |
Transporter associated with antigen processing (TAP) bound to the 14-mer peptide LPAVVGLSPGEQEY [16272 multi-frame micrographs composed of 30 frames each in TIFF format] | Lee J, Oldham ML, Manon V, Chen J [DOI: 10.1101/2023.06.16.545308] |
5.5 TB | 3.9 Å |
| 2024-07-18 |  |
Rhodobacter microvirus Ebor attached to B10 host cell, single particle data [2750 multi-frame micrographs composed of 25 frames each in TIFF format] | Bardy P, MacDonald CIW, Kirchberger PC, Jenkins HT, Botka T, Byrom L, Alim NTB, Traore DAK, Konig HC, Nicholas TR, Chechik M, Hart SJ, Turkenburg JP, Blaza JN, Beatty JT, Fogg PCM, Antson AA [Pubmed: 38915634] [DOI: 10.1101/2024.06.11.598214] |
498.5 GB | 7.84 Å |
| 2024-07-16 |  |
Cryo electron tomography of chromatin condensed by PRC1-CBX8 [multiple data sets in MRC format] | Uckelmann M, Levina V, Taveneau C, de Marco A, Davidovich C | 8.7 GB | — |
| 2024-07-16 |  |
Cryo-EM structure of human pseudouridine synthase 3 and tRNA-Gln [8792 micrographs in TIFF format] | Lin T.-Y., Glatt S. [Pubmed: 38996458] [DOI: 10.1016/j.molcel.2024.06.013] |
3.4 TB | 3.1 Å |
| 2024-07-16 |  |
cryo-EM structure of human tRNA(GlyCCC) [6016 micrographs in MRC format] | Biela AP, Glatt S | 528.2 GB | 5.23 Å |
| 2024-07-16 |  |
cryo-EM structure of human tRNA(GluUUC) - PUS4 and PUS7 modified [6112 micrographs in MRC format] | Biela AP, Glatt S | 536.7 GB | 4.95 Å |
| 2024-07-16 |  |
Single-Particle Cryo-EM of DPS at Various Tilts [multiple data sets in TIFF, MRC and MRCS formats] | Aiyer S, Baldwin PR, Tan SM, Shan Z, Oh J, Mehrani A, Bowman ME, Louie G, Passos DO, Đorđević-Marquardt S, Mietzsch M, Hull JA, Hoshika S, Barad BA, Grotjahn DA, McKenna R, Agbandje-McKenna M, Benner SA, Noel JAP, Wang D, Tan YZ, Lyumkis D [Pubmed: 38195598] [DOI: 10.1038/s41467-023-44555-7] |
114.7 GB | 2.6 - 3.2 Å |
| 2024-07-16 |  |
CryoEM SPA dataset of tetrameric forms of the serotonin-gated 5-HT3A receptor apo state [7932 multi-frame micrographs composed of 40 frames each in TIFF format] | Introini B | 4.2 TB | 3.8 - 3.9 Å |
| 2024-07-16 |  |
Cryo-electron micrographs of Proteorhodopsin A18L [27712 multi-frame micrographs composed of 40 frames each in TIFF format] | Hirschi S, Lemmin T, Fotiadis D | 3.8 TB | 2.82 - 3.54 Å |
| 2024-07-16 |  |
Cryo electron micrographs of retinal-free Proteoopsin bound to decanoate [20910 multi-frame micrographs composed of 40 frames each in TIFF format] | Hirschi S, Lemmin T, Fotiadis D | 3.0 TB | 2.97 Å |
| 2024-07-16 |  |
Cryo-EM of Caulobacter crescentus FljK flagellar filament [8813 multi-frame micrographs composed of 55 frames each in TIFF format] | Sanchez JC, Montemayor EJ, Ploscariu NT, Parrell D, Baumgardt JK, Yang JE, Sibert B, Cai K, Wright ER [Pubmed: 37503001] [DOI: 10.1101/2023.07.10.548443] |
2.0 TB | 2.71 Å |
| 2024-07-16 |  |
In situ cryoET of beta-amyloid and tau in post-mortem Alzheimer's disease brain [61 tilt series in MRC format] | Jenkins J [Pubmed: 38987603] [DOI: 10.1038/s41586-024-07680-x] |
149.4 GB | 8.7 - 33.0 Å |
| 2024-07-16 |  |
In situ cryoET of beta-amyloid and tau in post-mortem Alzheimer's disease brain [61 reconstructed volumes in MRC format] | Jenkins J [Pubmed: 38987603] [DOI: 10.1038/s41586-024-07680-x] |
127.0 GB | 8.7 - 33.0 Å |
| 2024-07-16 |  |
In situ cryoET of beta-amyloid and tau in post-mortem Alzheimer's disease brain [61 reconstructed volumes in MRC format] | Jenkins J [Pubmed: 38987603] [DOI: 10.1038/s41586-024-07680-x] |
167.0 GB | 8.7 - 33.0 Å |
| 2024-07-16 |  |
In situ cryoET of beta-amyloid and tau in post-mortem Alzheimer's disease brain [61 reconstructed volumes in MRC format] | Jenkins J [Pubmed: 38987603] [DOI: 10.1038/s41586-024-07680-x] |
140.6 GB | 8.7 - 33.0 Å |
| 2024-07-16 |  |
Particle stack from SARS-CoV-2 (wuhan variant) Spike protein in complex with the single chain fragment scFv41N single particle cryo-EM data [stack of 4991 particles in MRCS format] | Chaves-Sanjuan A, Berlinguer M, Bolognesi M | 712.4 GB | 3.8 - 4.0 Å |
| 2024-07-16 |  |
Cryo-EM of Caulobacter crescentus FljM flagellar filament [9780 multi-frame micrographs composed of 45 frames each in TIFF format] | Sanchez JC, Montemayor EJ, Ploscariu NT, Parrell D, Baumgardt JK, Yang JE, Sibert B, Cai K, Wright ER [Pubmed: 37503001] [DOI: 10.1101/2023.07.10.548443] |
1.9 TB | 2.11 Å |
| 2024-07-16 |  |
In vitro-induced genome-releasing intermediate of Rhodobacter microvirus Ebor computed with C5 symmetry [2810 multi-frame micrographs composed of 2765 frames each in EER format] | Bardy P, MacDonald CIW, Kirchberger PC, Jenkins HT, Botka T, Byrom L, Alim NTB, Traore DAK, Konig HC, Nicholas TR, Chechik M, Hart SJ, Turkenburg JP, Blaza JN, Beatty JT, Fogg PCM, Antson AA [Pubmed: 38915634] [DOI: 10.1101/2024.06.11.598214] |
4.3 TB | 25.0 Å |
| 2024-07-14 |  |
CryoEM micrographs of a group II RNP in the post-ligation state [multiple data sets in TIFF format] | Xu L, Liu T, Chung K [Pubmed: 37993708] [DOI: 10.1038/s41586-023-06746-6] |
5.9 TB | 3.0 Å |
| 2024-07-14 |  |
Transporter associated with antigen processing (TAP) bound to the 8-mer peptide RRYQSTEL [16306 multi-frame micrographs composed of 30 frames each in TIFF format] | Lee J, Oldham ML, Manon V, Chen J [DOI: 10.1101/2023.06.16.545308] |
5.6 TB | 3.8 Å |
| 2024-07-12 |  |
UFM1 ribosome E3 ligase complex bound to the 60S ribosomal subunit [multiple data sets in EER and MRC formats] | Makhlouf L [Pubmed: 38383789] [DOI: 10.1038/s41586-024-07093-w] |
22.6 TB | 2.2 - 3.2 Å |
| 2024-07-11 |  |
Unaligned multi-frame micrographs of SARS-CoV-2 Nsp15 in apo form and in complex with poly(U)-containing dsRNA [22419 multi-frame micrographs composed of 2051 frames each in EER format] | Ito F, Yang H, Zhou ZH, Chen XS [Pubmed: 38613382] [DOI: 10.1093/procel/pwae009] |
24.5 TB | 2.33 - 3.25 Å |
| 2024-07-09 |  |
Single particle cryo-EM dataset of Bos taurus mitochondrial complex I (originally purified in LMNG) proteoliposomes and deactivated [6692 multi-frame micrographs composed of 40 frames each in TIFF format] | Grba DN, Wright JJ, Fisher W, Yin Z, Hirst J [Pubmed: 38870289] [DOI: 10.1126/science.ado2075] |
1.4 TB | 2.6 - 3.3 Å |
