Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2024-12-13 |  |
Cryo electron tomography of Chlamydomonas reinhardtii prepared using FIB milling [multiple data sets in MRC and MRCS formats] | Li X, Yan X [DOI: 10.21203/rs.3.rs-4404303/v1] |
33.1 GB | 24.2 Å |
| 2024-12-12 |  |
Cryo-EM of human CAK: Microscope comparisons [multiple data sets in EER format] | Cushing VI, Koh AF, Feng J, Ali S, Kotecha A, Greber BJ [Pubmed: 38480681] [DOI: 10.1038/s41467-024-46375-9] |
10.2 TB | 2.0 Å |
| 2024-12-09 |  |
Gelsolin-severed and capped F-actin raw data from 'Mechanism of actin filament severing and capping by gelsolin' [multiple data sets in TIFF format] | Barrie KR, Rebowski G, Dominguez R [Pubmed: 39448849] [DOI: 10.1038/s41594-024-01412-5] |
13.3 TB | 2.53 - 3.63 Å |
| 2024-12-06 |  |
Cryo electron microscopy of purified M. tuberculosis CoaX [7913 multi-frame micrographs composed of 40 frames each in TIFF format] | Chen J, Ekiert DC, Bhabha G, Yoo JH [DOI: 10.1073/pnas.2407239121] |
3.0 TB | 2.59 - 2.71 Å |
| 2024-12-05 |  |
CryoEM of E. coli RNA polymerase on lambda PR promoter DNA [3511 multi-frame micrographs composed of 30 frames each in TIFF format] | Saecker RM, Chen J, Chiu CE, Malone B, Sotiris J, Ebrahim M, Yen LY, Eng ET, Darst SA [Pubmed: 34599106] [DOI: 10.1073/pnas.2112877118] |
967.9 GB | 3.2 - 3.7 Å |
| 2024-12-05 |  |
CryoEM of E. coli RNA polymerase on lambda PR -5G to -5C promoter DNA [4437 multi-frame micrographs composed of 50 frames each in TIFF format] | Saecker RM, Chen J, Chiu CE, Malone B, Sotiris J, Ebrahim M, Yen LY, Eng ET, Darst SA [Pubmed: 34599106] [DOI: 10.1073/pnas.2112877118] |
1.8 TB | 3.5 Å |
| 2024-12-05 |  |
CryoEM of E. coli RNA polymerase and lambda PR promoter DNA at equilibrium at 5 degrees Celsius [2764 multi-frame micrographs composed of 50 frames each in TIFF format] | Saecker RM, Mueller AU, Malone B, Chen J, Budell WC, Dandey VP, Maruthi K, Mendez JH, Molina N, Eng ET, Yen LY, Potter CS, Carragher B, Darst SA [Pubmed: 38951624] [DOI: 10.1038/s41594-024-01349-9] |
1.2 TB | 2.8 - 2.9 Å |
| 2024-12-04 |  |
Single particle cryoEM data of spinach cytochrome b6f incubated with decylplastoquinone [7784 multi-frame micrographs composed of 40 frames each in TIFF format] | Pintscher S, Pietras R, Mielecki B, Indyka P, Rawski M, Koziej L, Jaciuk M, Wazny G, Glatt S, Osyczka A [Pubmed: 39362993] [DOI: 10.1038/s41477-024-01804-x] |
2.8 TB | 1.94 Å |
| 2024-12-04 |  |
Cryo electron micrographs of Coxsackievirus A9 bound with compound 20 (CL300) [550 multi-frame micrographs composed of 40 frames each in MRC format] | Plavec Z, Mitchell C, Buckner C, Butcher SJ [Pubmed: 39292620] [DOI: 10.1021/acs.jmedchem.4c00701] |
329.7 GB | 2.26 Å |
| 2024-12-04 |  |
Cryo electron micrographs of Coxsackievirus A9 bound with compound 15 (CL278) [604 multi-frame micrographs composed of 40 frames each in MRC format] | Plavec Z, Mitchell C, Buckner C, Butcher SJ [Pubmed: 39292620] [DOI: 10.1021/acs.jmedchem.4c00701] |
279.6 GB | 2.58 Å |
| 2024-12-04 |  |
Cryo electron micrographs of Coxsackievirus A9 bound with compound 16 (CL298) [530 multi-frame micrographs composed of 40 frames each in MRC format] | Plavec Z, Mitchell C, Buckner C, Butcher SJ [Pubmed: 39292620] [DOI: 10.1021/acs.jmedchem.4c00701] |
316.8 GB | 2.75 Å |
| 2024-12-04 |  |
Cryo electron micrographs of Coxsackievirus A9 bound with compound 17 (CL301) [544 multi-frame micrographs composed of 40 frames each in MRC format] | Plavec Z, Mitchell C, Buckner C, Butcher SJ [Pubmed: 39292620] [DOI: 10.1021/acs.jmedchem.4c00701] |
323.5 GB | 2.53 Å |
| 2024-12-04 |  |
Cryo electron micrographs of Coxsackievirus A9 bound with compound 14 (CL275) [567 multi-frame micrographs composed of 40 frames each in MRC format] | Plavec Z, Mitchell C, Buckner C, Butcher SJ [Pubmed: 39292620] [DOI: 10.1021/acs.jmedchem.4c00701] |
340.9 GB | 2.31 Å |
| 2024-12-04 |  |
Cryo electron micrographs of Coxsackievirus A9 bound with compound 18 (CL304) [625 multi-frame micrographs composed of 40 frames each in MRC format] | Plavec Z, Mitchell C, Buckner C, Butcher SJ [Pubmed: 39292620] [DOI: 10.1021/acs.jmedchem.4c00701] |
374.9 GB | 2.64 Å |
| 2024-12-04 |  |
Cryo electron micrographs of Coxsackievirus A9 bound with compound 19 (CL313) [609 multi-frame micrographs composed of 40 frames each in MRC format] | Plavec Z, Mitchell C, Buckner C, Butcher SJ [Pubmed: 39292620] [DOI: 10.1021/acs.jmedchem.4c00701] |
365.3 GB | 2.69 Å |
| 2024-12-03 |  |
Full-length mouse 5-HT3A receptor in complex with serotonin, pre-activated and open-like [5771 multi-frame micrographs composed of 40 frames each in TIFF format] | Felt KCF, Chakrapani SC [Pubmed: 38177669] [DOI: 10.1038/s41594-023-01140-2] |
2.7 TB | 2.75 Å |
| 2024-12-03 |  |
Cryo electron microscopy of Medusavirus medusae nucleosome-like particle [multiple data sets in EER and MRC formats] | Toner CM, Hoitsma NM, Weerawarana S, Luger K [Pubmed: 39443461] [DOI: 10.1038/s41467-024-53364-5] |
6.6 TB | 3.3 - 5.1 Å |
| 2024-12-03 |  |
Raw LZW-compressed TIFF files (Structural dynamics of human ribosomes in situ reconstructed by exhaustive high-resolution template matching) [multiple data sets in DM4 and TIFF formats] | Rickgauer JP, Lippincott-Schwartz J [DOI: 10.1016/j.molcel.2024.11.003] |
416.0 GB | — |
| 2024-12-02 |  |
Single Particle Cryo-EM of the PARIS Immune complex following release of AriB [9399 multi-frame micrographs composed of 50 frames each in TIFF format] | Burman NB, Henriques W, Wilkinson R, Graham A, Wiedenheft B [DOI: 10.1038/s41586-024-07874-3] |
7.0 TB | 4.5 Å |
| 2024-12-02 |  |
Cryo-EM of hMRS2-BRIL with Ca2+ [10816 multi-frame micrographs in tif format] [10816 multi-frame micrographs composed of 40 frames each in MRC format] | He Z, Mount JW, Zhang J, Yuan P [DOI: 10.1038/s41594-024-01420-5] |
2.6 TB | 3.11 Å |
| 2024-12-02 |  |
FIB-SEM datasets of hippocampal neurons from WT and FAM92A1 knockout mice [multiple data sets in TIFF format] | Vihinen H, Jokitalo E, Wang L [Pubmed: 39043703] [DOI: 10.1038/s41467-024-50565-w] |
73.6 GB | — |
| 2024-12-02 |  |
Single particle dataset of respiratory complex I from Paracoccus dentrificans in MSP2N2 nanodiscs [16814 multi-frame micrographs composed of 40 frames each in TIFF format] | Ivanov BS, Bridges HR [Pubmed: 39472559] [DOI: 10.1038/s41467-024-53679-3] |
6.7 TB | 2.3 - 2.5 Å |
| 2024-12-02 |  |
Interleaved scanning electron microscopy: exploring native samples at the mesoscale.Adult mouse brain [multiple data sets in TIFF and MRC formats] | Dumoux M | 344.8 GB | — |
| 2024-12-01 |  |
cryo-EM structure of a non-neutralizing antibody V5-4 in complex with SARS-CoV-2 spike [5895 micrographs in MRC format] | Bajic G [Pubmed: 39504245] [DOI: 10.1016/j.celrep.2024.114922] |
517.5 GB | 3.6 Å |
| 2024-11-30 |  |
Cryo-electron microscopy of mycobacteriophage BaDAS-1 particles [5571 multi-frame micrographs composed of 30 frames each in TIFF format] | Freeman KF, Podgorski J, White SJ, Hatfull GF | 1.4 TB | 2.67 - 4.0 Å |
