Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2025-03-19 |  |
Cryo electron micrographs of 70% DOPG 30%DPPG vesicles [multiple data sets in TIFF and MRC formats] | Schönnenbeck PS, Junglas BJ, Sachse CS | 285.9 GB | — |
| 2025-03-19 |  |
Dataset of apoferritin on HexAuFoil grids [multiple data sets in TIFF format] | Weckener M, Naylor CE | 53.4 GB | — |
| 2025-03-19 |  |
Electron tomography of endosymbiotic bacteria inside a bacteriocyte of the cereal weevil Sitophilus oryzae [120 reconstructed volumes in MRC format] | Santarella-Mellwig RSM, Balmand SB, Schwab YS, Zaidman-Remy AZR | 260.8 MB | — |
| 2025-03-18 |  |
NADPH-dependent sulfite reductase minimal dimer [stack of 185000 particles in MRCS format] | Ghazi Esfahani BGE, Walia NW, Neselu KN, Aragon MA, Askenasy IA, Wei AW, Mendez JHM, Stroupe MES [Pubmed: 38915618] [DOI: 10.1101/2024.06.14.599029] |
70.5 GB | 2.78 Å |
| 2025-03-17 |  |
Cryo electron structure of the ectodomain of SPRING bound to the ectodomain of Site-one protease [4886 multi-frame micrographs composed of 50 frames each in TIFF format] | Kober DL [Pubmed: 38977690] [DOI: 10.1038/s41467-024-50068-8] |
2.9 TB | 2.3 Å |
| 2025-03-17 |  |
Rhodobacter microvirus Ebor attached to the outer membrane vesicle [27 tilt series in EER format] | Bardy P, MacDonald CIW, Kirchberger PC, Jenkins HT, Botka T, Byrom L, Alim NTB, Traore DAK, Konig HC, Nicholas TR, Chechik M, Hart SJ, Turkenburg JP, Blaza JN, Beatty JT, Fogg PCM, Antson AA [Pubmed: 38915634] [DOI: 10.1101/2024.06.11.598214] |
531.2 GB | 13.2 Å |
| 2025-03-17 |  |
TadA without nucleotide [21498 multi-frame micrographs composed of 44 frames each in TIFF format] | Hohl M, Low HH [Pubmed: 39103374] [DOI: 10.1038/s41467-024-50280-6] |
6.8 TB | 4.0 Å |
| 2025-03-17 |  |
Cytoplasmic ribosomes on mitochondria alter the local membrane environment for protein import [multiple data sets in TIFF and MRC formats] | Chang YT, Barad BA, Rahmani H, Zid BM, Grotjahn DA [Pubmed: 39071314] [DOI: 10.1083/jcb.202407110] |
764.2 GB | 8.0 - 15.0 Å |
| 2025-03-17 |  |
Cryo electron micrographs of Kaposi’s sarcoma-associated herpesvirus glycoprotein B in post-fusion conformation [14633 multi-frame micrographs composed of 49 frames each in TIFF format] | Ito F, Zhen J, Xie G, Huang H, Silva JC, Wu T-T, Zhou ZH [Pubmed: 39818969] [DOI: 10.1128/jvi.01533-24] |
3.5 TB | 3.3 Å |
| 2025-03-17 |  |
Cryo-EM structure of Enoyl-CoA hydratase from Mycobacterium smegmatis [9120 multi-frame micrographs composed of 25 frames each in TIFF format] | Shek R, Quispe J, Staker B, Phan IQ, Barrett LQ, Van Voorhis WC | 1.3 TB | 2.85 Å |
| 2025-03-14 |  |
Rhodobacter microvirus Ebor attached to the host cell of Rhodobacter capsulatus B10 [36 tilt series in EER format] | Bardy P, MacDonald CIW, Kirchberger PC, Jenkins HT, Botka T, Byrom L, Alim NTB, Traore DAK, Konig HC, Nicholas TR, Chechik M, Hart SJ, Turkenburg JP, Blaza JN, Beatty JT, Fogg PCM, Antson AA [Pubmed: 38915634] [DOI: 10.1101/2024.06.11.598214] |
108.0 GB | 31.0 Å |
| 2025-03-10 |  |
TadA with AMPPNP [5108 multi-frame micrographs composed of 40 frames each in TIFF format] | Hohl M, Low HH [Pubmed: 39103374] [DOI: 10.1038/s41467-024-50280-6] |
2.2 TB | 3.8 Å |
| 2025-03-10 |  |
Cryo-electron micrographs of Cholinephosphotransferase in complex with diacylglycerol [multiple data sets in TIFF and MRC formats] | Roberts JR [Pubmed: 39747155] [DOI: 10.1038/s41467-024-55673-1] |
1.2 TB | 3.2 Å |
| 2025-03-10 |  |
Cryo-EM micrographs of purified human BIRC6 in presence of MAP1LC3B [7580 micrographs in MRC format] | Ehrmann JF, Grabarczyk DB, Clausen T [Pubmed: 36758105] [DOI: 10.1126/science.ade8873] |
473.8 GB | 3.3 Å |
| 2025-03-05 |  |
Cryo-EM micrographs of purified human BIRC6 in presence of CASP9 [9289 micrographs in MRC format] | Ehrmann JF, Grabarczyk DB, Clausen T [Pubmed: 36758105] [DOI: 10.1126/science.ade8873] |
580.6 GB | 3.3 Å |
| 2025-03-05 |  |
Cryo-EM micrographs of purified human BIRC6 in presence of HTRA2 [8842 micrographs in MRC format] | Ehrmann JF, Grabarczyk DB, Clausen T [Pubmed: 36758105] [DOI: 10.1126/science.ade8873] |
552.7 GB | 3.3 - 6.2 Å |
| 2025-03-04 |  |
PSI-FCPI of the diatom Thalassiosira pseudonana CCMP1335 [8950 multi-frame micrographs composed of 50 frames each in TIFF format] | Kato K, Nagao R, Nakajima Y, Shen JR [Pubmed: 39480899] [DOI: 10.7554/eLife.99858] |
1.7 TB | 2.3 Å |
| 2025-02-27 |  |
Single particle cryogenic electron micrographs of isolated mouse mitochondrial supercomplex I2+III2 [multiple data sets in TIFF format] | Letts JA, Padavannil A [Pubmed: 39788125] [DOI: 10.1016/j.cmet.2024.11.011] |
18.4 TB | 3.67 - 4.25 Å |
| 2025-02-27 |  |
EcPKS2 inhibited with Malonyl-CoA [17420 multi-frame micrographs composed of 50 frames each in TIFF format] | Schubert HL [Pubmed: 39913209] [DOI: 10.1073/pnas.2419884122] |
4.6 TB | 2.92 - 3.15 Å |
| 2025-02-24 |  |
Cryo-ET of Dictyostelium discoideum in HL5 medium (control condition) [59 tilt series in MRC format] | Hoffmann PC, Beck M [Pubmed: 39729993] [DOI: 10.1016/j.molcel.2024.11.038] |
386.5 GB | 30.0 Å |
| 2025-02-24 |  |
Cryo-ET of Dictyostelium discoideum in 0.4 M sorbitol (hyperosmotic stress) [59 tilt series in MRC format] | Hoffmann PC, Beck M [Pubmed: 39729993] [DOI: 10.1016/j.molcel.2024.11.038] |
332.1 GB | 38.0 Å |
| 2025-02-21 |  |
AL amyloid fibril from the FOR010 light chain [4008 multi-frame micrographs composed of 963 frames each in EER format] | Pfeiffer PB, Banerjee S, Schmidt M, Fändrich M [Pubmed: 38879609] [DOI: 10.1038/s41467-024-49520-6] |
1.8 TB | 2.25 Å |
| 2025-02-21 |  |
Single particle cryoEM dataset of Haspin kinase bound to a nucleosome [9999 multi-frame micrographs composed of 1485 frames each in EER format] | Hicks CW, Wolberger C | 5.8 TB | 2.99 - 3.64 Å |
| 2025-02-21 |  |
movies for NKCC1 bound with bumetanide [6027 multi-frame micrographs composed of 40 frames each in TIFF format] | Cao E [Pubmed: 39875725] [DOI: 10.1038/s44318-025-00368-6] |
1.5 TB | 2.5 Å |
| 2025-02-13 |  |
Polyketide Synthase EcPKS1 [2913 multi-frame micrographs composed of 36 frames each in TIFF format] | Schubert HL [Pubmed: 39913209] [DOI: 10.1073/pnas.2419884122] |
2.0 TB | 3.5 - 4.3 Å |
