Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2025-01-17 |  |
Cryo-EM structure of the decameric TraT surface exclusion lipoprotein from Klebsiella pneumoniae (pKpQIL plasmid) [5558 multi-frame micrographs composed of 38 frames each in MRC format] | Beis K, Seddon C [DOI: 10.1101/2024.08.09.607165] |
6.2 TB | 2.47 Å |
| 2025-01-16 |  |
Single particle dataset of respiratory complex I from Paracoccus dentrificans in n-dodecyl-β-D-maltoside (DDM) [2278 multi-frame micrographs composed of 25 frames each in MRC format] | Ivanov BS, Bridges HR [Pubmed: 39472559] [DOI: 10.1038/s41467-024-53679-3] |
353.3 GB | — |
| 2025-01-16 |  |
Cryo-EM of the CCT-PhLP1-Gb5 complex treated with ATP-AlFx [25457 multi-frame micrographs composed of 40 frames each in TIFF format] | Sass MI, Wang S, Mack D, Cottam SL, Shen PS, Willardson BM [Pubmed: 37852256] [DOI: 10.1016/j.molcel.2023.09.032] |
10.3 TB | 2.7 - 3.36 Å |
| 2025-01-16 |  |
In situ cryo-electron tomograms #1-#3 of native mouse heart muscle from SOLIST procedure. [3 tilt series in MRC format] | Dung NHT, Perone G, Klena N, Vazzana R, Kaluthantrige Don F, Silva M, Sorrentino S, Swuec P, Leroux F, Kelebic N, Coscia F, Erdmann PS [Pubmed: 39271806] [DOI: 10.1038/s41592-024-02384-6] |
7.4 GB | — |
| 2025-01-16 |  |
DDM extracted FtsH•HflK/C nautilus-like assembly [25179 multi-frame micrographs composed of 40 frames each in TIFF format] | Ghanbarpour AG [Pubmed: NA] [DOI: 10.1101/2024.08.09.604662] |
3.5 TB | 4.4 Å |
| 2025-01-09 |  |
E. coli BAM complex bound to SurA with Darobactin [6357 multi-frame micrographs composed of 50 frames each in TIFF format] | Fenn KL, Ranson NA [Pubmed: 39218969] [DOI: 10.1038/s41467-024-51358-x] |
1.1 TB | 2.9 - 3.5 Å |
| 2025-01-09 |  |
E. coli BAM complex bound to SurA_OmpX (arrival complex) [2358 multi-frame micrographs composed of 41 frames each in TIFF format] | Fenn KL, Ranson NA [Pubmed: 39218969] [DOI: 10.1038/s41467-024-51358-x] |
359.0 GB | 5.3 Å |
| 2025-01-09 |  |
E. coli BAM complex bound to SurA_OmpX with beta-1 crosslink (handover complex) [31680 multi-frame micrographs composed of 52 frames each in TIFF format] | Fenn KL, Ranson NA [Pubmed: 39218969] [DOI: 10.1038/s41467-024-51358-x] |
3.7 TB | 4.0 Å |
| 2025-01-09 |  |
E. coli BAM complex bound to SurA_EspP (release complexes) [29229 multi-frame micrographs composed of 47 frames each in TIFF format] | Fenn KL, Ranson NA [Pubmed: 39218969] [DOI: 10.1038/s41467-024-51358-x] |
2.0 TB | 4.3 - 5.2 Å |
| 2025-01-09 |  |
Cryo electron tomography of Enterovirus 71-infected cells [1 tilt series in MRC format] | Ishemgulova A, Mukhamedova L, Trebichalská Z, Füzik T | 2.5 GB | 4.7 - 7.1 Å |
| 2025-01-09 |  |
cryo electron tomography of Pickering-emulsified condensate (LAF based scaffolds and GFP(-9)-6his-mi3 cage protein) [400 reconstructed volumes in TIFF format] | Lee YS, Hwang HR, Kim J [DOI: 10.26434/chemrxiv-2024-nkftl] |
1.6 GB | — |
| 2025-01-09 |  |
cryo electron tomography of Pickering-emulsified condensate (PRM-SH3 based scaffolds and GFP(-9)-mi3 cage protein) [300 reconstructed volumes in TIFF format] | Lee YS, Hwang HR, Kim J [DOI: 10.26434/chemrxiv-2024-nkftl] |
1.2 GB | — |
| 2025-01-09 |  |
Unaligned multi-frame micrographs of the mu opioid receptor bound to a nanobody antagonist NbE [5939 multi-frame micrographs composed of 44 frames each in MRC format] | Yu J, Kumar A, Zhang X, Martin C, Holsbeeck KV, Raia P, Koehl A, Laeremans T, Steyaert J, Manglik A, Ballet S, Boland A, Stoeber M [Pubmed: 38106026] [DOI: 10.1101/2023.12.06.570395] |
8.0 TB | 3.2 Å |
| 2025-01-09 |  |
DDM extracted overexpressed HflK/C nautilus-like assembly [16055 multi-frame micrographs composed of 40 frames each in TIFF format] | Ghanbarpour AG, Sauer RTS, Davis JH [Pubmed: NA] [DOI: 10.1101/2024.08.09.604662] |
2.1 TB | 7.7 Å |
| 2025-01-08 |  |
Micrographs that led to the structure of Dia1 on F-actin [multiple data sets in TIFF format] | Palmer NJ, Barrie KR, Dominguez R [Pubmed: 38843827] [DOI: 10.1038/s41586-024-07637-0] |
10.0 TB | 3.41 - 3.51 Å |
| 2025-01-02 |  |
Movies of CagY∆AP mutant Cag T4SS from Helicobacter pylori [13156 multi-frame micrographs composed of 60 frames each in TIFF format] | Roberts JR [Pubmed: 38631913] [DOI: 10.26508/lsa.202302560] |
4.2 TB | 3.8 - 6.6 Å |
| 2024-12-21 |  |
Cryo electron micrographs of soluble human AP-3 core [17545 micrographs in MRC format] | Baker RW, Begley M [Pubmed: 38895279] [DOI: 10.1101/2024.06.05.597630] |
1.5 TB | 3.6 Å |
| 2024-12-21 |  |
Cryo electron micrographs of AP-3 core bound to Arf1 and LAMPI on a lipid nanodisc [11601 micrographs in MRC format] | Baker RW, Begley M [Pubmed: 38895279] [DOI: 10.1101/2024.06.05.597630] |
1018.6 GB | 4.2 - 5.6 Å |
| 2024-12-21 |  |
CryoEM of E. coli RNA polymerase on T7A1 promoter DNA [6790 multi-frame micrographs composed of 30 frames each in TIFF format] | Saecker RM, Chen J, Chiu CE, Malone B, Sotiris J, Ebrahim M, Yen LY, Eng ET, Darst SA [Pubmed: 34599106] [DOI: 10.1073/pnas.2112877118] |
1.6 TB | 2.9 Å |
| 2024-12-13 |  |
Cryo electron tomography of Chlamydomonas reinhardtii prepared using FIB milling [multiple data sets in MRC and MRCS formats] | Li X, Yan X [Pubmed: 39774981] [DOI: 10.21203/rs.3.rs-4404303/v1] |
33.1 GB | 24.2 Å |
| 2024-12-12 |  |
Cryo-EM of human CAK: Microscope comparisons [multiple data sets in EER format] | Cushing VI, Koh AF, Feng J, Ali S, Kotecha A, Greber BJ [Pubmed: 38480681] [DOI: 10.1038/s41467-024-46375-9] |
10.2 TB | 2.0 Å |
| 2024-12-09 |  |
Gelsolin-severed and capped F-actin raw data from 'Mechanism of actin filament severing and capping by gelsolin' [multiple data sets in TIFF format] | Barrie KR, Rebowski G, Dominguez R [Pubmed: 39448849] [DOI: 10.1038/s41594-024-01412-5] |
13.3 TB | 2.53 - 3.63 Å |
| 2024-12-06 |  |
Cryo electron microscopy of purified M. tuberculosis CoaX [7913 multi-frame micrographs composed of 40 frames each in TIFF format] | Chen J, Ekiert DC, Bhabha G, Yoo JH [DOI: 10.1073/pnas.2407239121] |
3.0 TB | 2.59 - 2.71 Å |
| 2024-12-05 |  |
CryoEM of E. coli RNA polymerase on lambda PR promoter DNA [3511 multi-frame micrographs composed of 30 frames each in TIFF format] | Saecker RM, Chen J, Chiu CE, Malone B, Sotiris J, Ebrahim M, Yen LY, Eng ET, Darst SA [Pubmed: 34599106] [DOI: 10.1073/pnas.2112877118] |
967.9 GB | 3.2 - 3.7 Å |
| 2024-12-05 |  |
CryoEM of E. coli RNA polymerase on lambda PR -5G to -5C promoter DNA [4437 multi-frame micrographs composed of 50 frames each in TIFF format] | Saecker RM, Chen J, Chiu CE, Malone B, Sotiris J, Ebrahim M, Yen LY, Eng ET, Darst SA [Pubmed: 34599106] [DOI: 10.1073/pnas.2112877118] |
1.8 TB | 3.5 Å |
