Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2024-06-04 |  |
Taf15 amyloid filaments - Individual 2 [2314 multi-frame micrographs composed of 40 frames each in TIFF format] | Tetter S, Arseni D, Murzin AG, Buhidma Y, Peak-Chew SY, Garringer HJ, Newell KL, Vidal R, Apostolova LG, Lashley T, Ghetti B, Ryskeldi-Falcon B [Pubmed: 38057661] [DOI: 10.1038/s41586-023-06801-2] |
440.4 GB | 2.14 Å |
| 2024-06-04 |  |
Taf15, TMEM106B and Aß42 amyloid filaments - Individual 4, frontal cortex [5604 multi-frame micrographs composed of 41 frames each in TIFF format] | Tetter S, Arseni D, Murzin AG, Buhidma Y, Peak-Chew SY, Garringer HJ, Newell KL, Vidal R, Apostolova LG, Lashley T, Ghetti B, Ryskeldi-Falcon B [Pubmed: 38057661] [DOI: 10.1038/s41586-023-06801-2] |
930.4 GB | 2.67 - 3.56 Å |
| 2024-06-04 |  |
Taf15, TMEM106B and Aß42 amyloid filaments - Individual 4, brainstem [4682 multi-frame micrographs composed of 21 frames each in TIFF format] | Tetter S, Arseni D, Murzin AG, Buhidma Y, Peak-Chew SY, Garringer HJ, Newell KL, Vidal R, Apostolova LG, Lashley T, Ghetti B, Ryskeldi-Falcon B [Pubmed: 38057661] [DOI: 10.1038/s41586-023-06801-2] |
435.6 GB | 2.39 - 3.7 Å |
| 2024-06-04 |  |
In vitro TDP-43 amyloid fibrils [1641 multi-frame micrographs composed of 40 frames each in TIFF format] | Sharma K, Schmidt M, Fändrich M [Pubmed: 38212334] [DOI: 10.1038/s41467-023-44489-0] |
280.1 GB | 3.76 - 4.05 Å |
| 2024-06-04 |  |
Cryo-electron tomogram of mitochondria in cryo-FIB milled s-Opa1* mouse embryonic fibroblasts [284 multi-frame micrographs composed of 6 frames each in TIFF format] | Fry MY, Navarro PP, Ananda VY, Ge Y, McDonald JL, Hakim P, Luce BE, Lugo CM, Chao LH [Pubmed: 38225406] [DOI: 10.1038/s44318-024-00027-2] |
21.4 GB | — |
| 2024-06-04 |  |
Cryo-electron tomogram of mitochondria in cryo-FIB milled mouse embryonic fibroblasts with OPA1 deletion [278 multi-frame micrographs composed of 6 frames each in TIFF format] | Fry MY, Navarro PP, Ananda VY, Ge Y, McDonald JL, Hakim P, Luce BE, Lugo CM, Chao LH [Pubmed: 38225406] [DOI: 10.1038/s44318-024-00027-2] |
18.5 GB | — |
| 2024-06-04 |  |
Cryo-electron tomogram of mitochondria in cryo-FIB milled mouse embryonic fibroblasts with OPA1 overexpression [258 multi-frame micrographs composed of 4 frames each in TIFF format] | Fry MY, Navarro PP, Ananda VY, Ge Y, McDonald JL, Hakim P, Luce BE, Lugo CM, Chao LH [Pubmed: 38225406] [DOI: 10.1038/s44318-024-00027-2] |
8.8 GB | — |
| 2024-06-03 |  |
The Cryo-EM 3D image reconstruction of isolated Lethocerus indicus Z-discs [3 tilt series in MRC format] | Yeganeh FA, Summerill C, Hu Z, Rahmani H, Taylor DW, Taylor KA [Pubmed: 37661214] [DOI: 10.1007/s10974-023-09657-1] |
23.0 GB | — |
| 2024-05-29 |  |
Cryo electron microscopy micrographs of high molecular weight fractions from yeast native cell extracts [51497 multi-frame micrographs composed of 972 frames each in EER format] | Schmidt L, Tueting C, Kyrilis F, Hamdi F, Semchonok DA, Kastritis PL [Pubmed: 38730276] [DOI: 10.1038/s42003-024-06204-7] |
23.8 TB | 3.21 Å |
| 2024-05-29 |  |
Cryo-EM of 9-6-17 Tulane virus with DTT treatment [771 multi-frame micrographs composed of 30 frames each in TIFF format] | Sun CS, Jiang WJ [Pubmed: 38254719] [DOI: 10.3390/biom14010119] |
165.8 GB | 2.63 Å |
| 2024-05-20 |  |
Cryo-EM structure of full-length ERGIC-53 in complex with MCFD2 [6345 multi-frame micrographs composed of 48 frames each in TIFF format] | Watanabe S, Inaba K [Pubmed: 38493152] [DOI: 10.1038/s41467-024-46747-1] |
1.4 TB | 2.53 - 6.76 Å |
| 2024-05-20 |  |
Cryo-EM structure of the CAK-THZ1 complex [multiple data sets in EER format] | Cushing VI, Koh AF, Feng J, Ali S, Kotecha A, Greber BJ [Pubmed: 38480681] [DOI: 10.1038/s41467-024-46375-9] |
4.7 TB | 1.9 Å |
| 2024-05-20 |  |
Cryo-EM micrographs of human α1B/βI+βIVb microtubules bound to GMPCPP decorated with TTLL6 [2770 micrographs in MRC format] | Zehr EA, Roll-Mecak A [Pubmed: 38658656] [DOI: 10.1038/s41589-024-01599-0] |
146.9 GB | 3.6 Å |
| 2024-05-20 |  |
Cryo-EM structure of the CAK-CT7030 complex [10017 multi-frame micrographs composed of 909 frames each in EER format] | Cushing VI, Koh AF, Feng J, Jurgaityte K, Bondke A, Kroll SHB, Barbazanges M, Scheiper B, Bahl AK, Barrett AGM, Ali S, Kotecha A, Greber BJ [Pubmed: 38480681] [DOI: 10.1038/s41467-024-46375-9] |
3.7 TB | 1.9 Å |
| 2024-05-20 |  |
Cryo-EM of the human CAK: Data for 1.73 Å-resolution reconstruction [multiple data sets in EER format] | Cushing VI, Koh AF, Feng J, Jurgaityte K, Bondke A, Kroll SHB, Barbazanges M, Scheiper B, Bahl AK, Barrett AGM, Ali S, Kotecha A, Greber BJ [Pubmed: 38480681] [DOI: 10.1038/s41467-024-46375-9] |
12.1 TB | 1.7 Å |
| 2024-05-20 |  |
Structural basis of human U5 snRNP late biogenesis and recycling (single particle cryo-EM dataset) [multiple data sets in EER and MRC formats] | Riabov Bassat D, Phillips AW, Plaschka C [Pubmed: 38467876] [DOI: 10.1038/s41594-024-01243-4] |
1.8 TB | 2.6 - 4.6 Å |
| 2024-05-20 |  |
Structure of an ALYREF-exon junction complex hexamer [multiple data sets in EER and MRC formats] | Pacheco-Fiallos B, Vorländer MK, Plaschka C [Pubmed: 37020021] [DOI: 10.1038/s41586-023-05904-0] |
6.6 TB | 2.4 Å |
| 2024-05-20 |  |
Raw data used to generate the structure of cortactin bound to the Arp2/3 complex [8970 multi-frame micrographs composed of 38 frames each in TIFF format] | Fregoso FE, Boczkowska M, Rebowski G, Carman PJ, Van Eeuwen T, Dominguez R [Pubmed: 37898612] [DOI: 10.1038/s41467-023-42229-y] |
2.9 TB | 2.89 Å |
| 2024-05-16 |  |
Cryo-EM structure of apo-CAK [5805 multi-frame micrographs composed of 981 frames each in EER format] | Cushing VI, Koh AF, Feng J, Ali S, Kotecha A, Greber BJ [Pubmed: 38480681] [DOI: 10.1038/s41467-024-46375-9] |
2.3 TB | 2.3 Å |
| 2024-05-16 |  |
Cryo-ET dataset on lamellae of Dictyostelium discoideum cells [213 tilt-series in MRC format] [213 tilt series in MRC format] | Tuijtel MW, Kreysing JP, Welsch S, Hummer G, Beck M, Turoňová B, Cruz-León S [Pubmed: 38669330] [DOI: 10.1126/sciadv.adk6285] |
382.6 GB | 3.9 Å |
| 2024-05-16 |  |
In situ cryo-electron tomography of Saccharomyces cerevisiae [37 multi-frame micrographs composed of 252 frames each in EER format] | Comet M, Dijkman PM, Boer Iwema R, Franke T, Masiulis S, Schampers R, Raschdorf O, Grollios F, Pryor Jr. EE, Drulyte I [Pubmed: 38512070] [DOI: 10.1107/S2059798324001840] |
3.1 GB | — |
| 2024-05-16 |  |
The cryo-electron microscopy structure of a Vitiosangium bacterial gasdermin in an slinky-like oligomeric conformation [8156 multi-frame micrographs composed of 50 frames each in TIFF format] | Johnson AG, Mayer ML, Schaefer SL, McNamara-Bordewick NK, Hummer G, Kranzusch PJ [Pubmed: 38509367] [DOI: 10.1038/s41586-024-07216-3] |
2.1 TB | 3.3 Å |
| 2024-05-14 |  |
Cryo-EM structure of CAK in complex with nucleotide analogue ATPgS [5781 multi-frame micrographs composed of 981 frames each in EER format] | Cushing VI, Koh AF, Feng J, Ali S, Kotecha A, Greber BJ [Pubmed: 38480681] [DOI: 10.1038/s41467-024-46375-9] |
2.3 TB | 1.9 Å |
| 2024-05-14 |  |
β2-adrenergic receptor in complex with nucleotide-free G protein Gs [multiple data sets in TIFF format] | Papasergi-Scott MM, Eskici G, Seven AB, Skiniotis G [Pubmed: 38480881] [DOI: 10.1038/s41586-024-07153-1] |
1.4 TB | 3.2 - 4.2 Å |
| 2024-05-14 |  |
β2-adrenergic receptor in complex with GTP-bound G protein Gs, vitrified 5 seconds post-GTP addition [8700 multi-frame micrographs composed of 63 frames each in TIFF format] | Papasergi-Scott MM, Panova O, Gao Y, Skiniotis G [Pubmed: 38480881] [DOI: 10.1038/s41586-024-07153-1] EMD-40096 EMD-40097 EMD-40098 EMD-40099 EMD-40100 EMD-40101 EMD-40102 EMD-40103 EMD-40104 EMD-40105 EMD-40106 EMD-40107 EMD-40108 EMD-40109 EMD-40110 EMD-40111 EMD-40112 EMD-40113 EMD-40114 EMD-40115 EMD-29985 EMD-29986 EMD-29987 EMD-29988 EMD-29989 EMD-29990 EMD-29991 EMD-29992 EMD-29993 EMD-29994 EMD-29995 EMD-29996 EMD-29997 EMD-29998 EMD-29999 EMD-40000 EMD-40001 EMD-40002 EMD-40004 EMD-40005 EMD-40009 EMD-40010 EMD-40011 EMD-40012 EMD-40013 EMD-40014 EMD-40015 EMD-40016 EMD-40017 EMD-40018 EMD-40019 EMD-40020 EMD-40021 EMD-40022 EMD-40023 EMD-40024 EMD-40025 EMD-40026 EMD-40027 EMD-40028 EMD-40156 EMD-40157 EMD-40158 EMD-40159 EMD-40160 EMD-40161 EMD-40163 EMD-40164 EMD-40165 EMD-40166 EMD-40167 EMD-40168 EMD-40169 EMD-40170 EMD-40171 EMD-40172 EMD-40173 EMD-40174 EMD-40175 EMD-40176 EMD-42408 EMD-42409 EMD-42410 EMD-42411 EMD-42412 EMD-42413 EMD-42414 EMD-42415 EMD-42416 EMD-42417 EMD-42418 EMD-42419 EMD-42420 EMD-42421 EMD-42422 EMD-42423 EMD-42424 EMD-42425 EMD-42426 EMD-42427 |
4.5 TB | 2.9 - 4.1 Å |
