Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2023-12-04 |  |
Single particle cryo-EM dataset of the complex between Corynebacterium glutamicum homohexameric 2-oxoglutarate dehydrogenase OdhA and the FHA-protein inhibitor OdhI [19443 multi-frame micrographs composed of 40 frames each in TIFF format] | Yang L, Mechaly A, Bellinzoni M [Pubmed: 37563123] [DOI: 10.1038/s41467-023-40253-6] |
6.6 TB | 2.29 Å |
| 2023-12-04 |  |
Single particle cryo-EM dataset of homohexameric 2-oxoglutarate dehydrogenase OdhA from Corynebacterium glutamicum in complex with the product succinyl-CoA [11827 multi-frame micrographs composed of 50 frames each in TIFF format] | Yang L, Mechaly A, Bellinzoni M [Pubmed: 37563123] [DOI: 10.1038/s41467-023-40253-6] |
4.0 TB | 2.07 Å |
| 2023-12-01 |  |
cAMP-bound SpSLC9C1 in lipid nanodiscs [multiple data sets in TIFF format] | Kalienkova V, Peter MF, Rheinberger J, Paulino C [Pubmed: 37880361] [DOI: 10.1038/s41586-023-06629-w] |
4.8 TB | 3.3 - 3.74 Å |
| 2023-11-14 |  |
Ligand-free SpSLC9C1 in lipid nanodiscs [11299 multi-frame micrographs composed of 76 frames each in TIFF format] | Kalienkova V, Peter MF, Rheinberger J, Paulino C [Pubmed: 37880361] [DOI: 10.1038/s41586-023-06629-w] |
3.3 TB | 3.21 - 3.4 Å |
| 2023-11-14 |  |
Ligand-free SpSLC9C1 in detergent [multiple data sets in TIFF format] | Kalienkova V, Peter MF, Rheinberger J, Paulino C [Pubmed: 37880361] [DOI: 10.1038/s41586-023-06629-w] |
2.1 TB | 3.05 - 3.3 Å |
| 2023-11-14 |  |
cGMP-bound SpSLC9C1 in lipid nanodiscs [multiple data sets in TIFF format] | Kalienkova V, Peter MF, Rheinberger J, Paulino C [Pubmed: 37880361] [DOI: 10.1038/s41586-023-06629-w] |
1.6 TB | 3.22 - 3.26 Å |
| 2023-11-13 |  |
Test subset: In situ cryo-ET dataset of Chlamydomonas reinhardtii prepared using cryo-plasmaFIB milling [18 tilt series in MRC format] | Kelley R, Zhang X, Obr M, Khavnekar S, Righetto R, Waltz F, Wietrzynski W, Michael A, Tagiltsev G, Beck F, Zhong E, Wan W, Briggs J, Plitzko J, Engel B, Kotecha A [Pubmed: 37613825] [DOI: 10.1093/micmic/ozad067.480] |
293.7 GB | — |
| 2023-11-07 |  |
A molecular network of conserved factors keeps ribosomes dormant in the egg [multiple data sets in MRC, MRCS and TIFF formats] | Leesch F, Lorenzo-Orts L, Grishkovskaya I, Kandolf S, Belacic K, Meinhart A, Haselbach D, Pauli A [Pubmed: 36653451] [DOI: 10.1038/s41586-022-05623-y] |
32.5 TB | 2.3 - 3.2 Å |
| 2023-11-07 |  |
Tau filaments from the cellular fraction of Alzheimer's disease patient brain [12117 multi-frame micrographs composed of 40 frames each in TIFF format] | Ryskeldi-Falcon BR-F, Behr TSB [Pubmed: 37163117] [DOI: 10.1101/2023.04.30.537820] |
1.9 TB | 3.27 Å |
| 2023-11-07 |  |
The lipid linked oligosaccharide polymerase Wzy and its regulating co-polymerase Wzz form a complex in vivo and in vitro [2351 multi-frame micrographs composed of 20 frames each in MRC format] | Weckener M, Woodward LS, Clarke BR, Liu H, Ward PN, Le Bas A, Bhella D, Whitfield C, Naismith JH [Pubmed: 36944376] [DOI: 10.1098/rsob.220373] |
273.6 GB | 3.6 Å |
| 2023-11-07 |  |
Single particle cryo-EM dataset of extended cowpea chlorotic mottle virus in plunge-frozen vitrified ice [multiple data sets in EER format] | Harder OF, Barrass SV, Drabbels M, Lorenz UJ [Pubmed: 37704664] [DOI: 10.1038/s41467-023-41444-x] |
5.1 TB | 3.9 Å |
| 2023-11-07 |  |
Single particle cryo-EM dataset of extended cowpea chlorotic mottle virus at pH 7.6 in laser-melted and revitrified ice [6200 multi-frame micrographs composed of 651 frames each in EER format] | Harder OF, Barrass SV, Drabbels M, Lorenz UJ [Pubmed: 37704664] [DOI: 10.1038/s41467-023-41444-x] |
980.5 GB | 4.3 Å |
| 2023-11-07 |  |
Single particle cryo-EM dataset of extended cowpea chlorotic mottle virus at pH 7.6 in plunge-frozen vitrified ice [3383 multi-frame micrographs composed of 1274 frames each in EER format] | Harder OF, Barrass SV, Drabbels M, Lorenz UJ [Pubmed: 37704664] [DOI: 10.1038/s41467-023-41444-x] |
1.0 TB | 4.1 Å |
| 2023-11-06 |  |
Single particle cryo-EM structure of RIG-I:RNA:Riplet ternary complex [3420 multi-frame micrographs composed of 40 frames each in TIFF format] | Wang W, Pyle AM [DOI: 10.1038/s41467-023-42982-0] |
1.5 TB | — |
| 2023-11-06 |  |
Micrographs of ER-derived vesicles from HEK293F cells [893 multi-frame micrographs composed of 8 frames each in TIFF format] | Gemmer M, Chaillet ML, van Loenhout J, Cuevas Arenas R, Vismpas D, Gröllers-Mulderij M, Koh FA, Albanese P, Scheltema RA, Howes SC, Kotecha A, Fedry J, Förster F [Pubmed: 36697828] [DOI: 10.1038/s41586-022-05638-5] |
1.1 TB | 4.5 - 9.3 Å |
| 2023-11-06 |  |
Cryo electron microscopy movies of telithromycin bound to the Saccharomyces cerevisiae 80S ribosome (G2400A mutant). [4371 multi-frame micrographs composed of 30 frames each in MRCS format] | Koller TO, Wilson DN [Pubmed: 33990576] [DOI: 10.1038/s41467-021-23068-1] |
363.4 GB | 2.877 Å |
| 2023-11-06 |  |
Cryo-EM structure of H2DIDS-bound human Anion Exchanger 1 [11020 micrographs in MRC format] | Capper MJ, Yang S, Stone AC, Vatansever S, Zilberg G, Mathiharan YK, Habib R, Hutchinson K, Zhao Y, Schlessinger A, Mezei M, Osman R, Zhang B, Wacker D [Pubmed: 37679563] [DOI: 10.1038/s41594-023-01085-6] |
965.1 GB | 2.98 Å |
| 2023-10-31 |  |
Cryogenic electron microscopy structure of human plakophilin-3 [multiple data sets in TIFF and MRC formats] | Gupta J, Rangarajan ES, Izard T [Pubmed: 37298410] [DOI: 10.3390/ijms24119458] |
8.5 TB | 5.03 Å |
| 2023-10-31 |  |
Structure and dynamics of a pentameric KCTD5/Cullin3/GBeta1Gamma2 E3 ubiquitin ligase complex [multiple data sets in MRC and MRCS formats] | Nguyen DM, Narayanan N, Kuntz DA, Prive GG [Pubmed: 38625940] [DOI: 10.1101/2023.09.20.558662] |
5.4 TB | 2.97 - 5.7 Å |
| 2023-10-31 |  |
Cryo-EM micrographs of AD tau filaments with PET ligand Flortaucipir [1172 multi-frame micrographs composed of 40 frames each in MRC format] | Shi Y, Ghetti B, Goedert M, Scheres S, Lovestam S [Pubmed: 37330290] [DOI: 10.1016/j.jmb.2023.168025] |
278.5 GB | 2.6 Å |
| 2023-10-23 |  |
High-throughput electron tomography identifies centriole over-elongation in plasma cell disorders [multiple data sets in MRC format] | Köhrer S, Dittrich T, Schorb M, Weinhold N, Haberbosch I, Börmel M, Pajor G, Goldschmidt H, Müller-Tidow C, Raab MS, John L, Seckinger A, Brobeil A, Dreger P, Tornóczky T, Pajor L, Hegenbart U, Schönland SO, Schwab Y, Krämer A [Pubmed: 37821581] [DOI: 10.1038/s41375-023-02056-y] |
7.7 TB | — |
| 2023-10-23 |  |
Cryogenic electron microscopy spa datset of a membrane-bound menaquinol:organohalide oxidoreductase [13783 micrographs in MRC format] | Ekundayo BE, Ni DC [DOI: 10.1101/2023.07.04.547610] |
861.5 GB | 2.83 Å |
| 2023-10-23 |  |
Cryo-EM structure of Bicarbonate-bound human Anion Exchanger 1 [5256 micrographs in MRC format] | Capper MJ, Yang S, Stone AC, Vatansever S, Zilberg G, Mathiharan YK, Habib R, Hutchinson K, Zhao Y, Schlessinger A, Mezei M, Osman R, Zhang B, Wacker D [Pubmed: 37679563] [DOI: 10.1038/s41594-023-01085-6] |
461.5 GB | 3.37 Å |
| 2023-10-23 |  |
Cryo-EM structure of DIDS-bound human Anion Exchanger 1 [5910 micrographs in MRC format] | Capper MJ, Yang S, Stone AC, Vatansever S, Zilberg G, Mathiharan YK, Habib R, Hutchinson K, Zhao Y, Schlessinger A, Mezei M, Osman R, Zhang B, Wacker D [Pubmed: 37679563] [DOI: 10.1038/s41594-023-01085-6] |
518.9 GB | 2.95 Å |
| 2023-10-23 |  |
Cryo-EM structure of Niflumic Acid-bound human Anion Exchanger 1 [5274 micrographs in MRC format] | Capper MJ, Yang S, Stone AC, Vatansever S, Zilberg G, Mathiharan YK, Habib R, Hutchinson K, Zhao Y, Schlessinger A, Mezei M, Osman R, Zhang B, Wacker D [Pubmed: 37679563] [DOI: 10.1038/s41594-023-01085-6] |
463.1 GB | 3.18 Å |
