Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
Due to a storage failure, some data files are currently inaccessible (Markted: Incomplete dataset).
We are currently working to restore, but we are accepting priority requests.(email, inquiry).
We are restoring lost files from backups in the following order:
We apologize for the inconvenience and appreciate your understanding.
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2025-11-18 |  |
Human antibody Fab MPV499 bound to hMPV DsCav-ES2 [400 micrographs in MRC format] | Khalil AM, Esfahani BG, Miller RJ, Huang J, Kuan G, Balmaseda A, Gordon A, Mousa JJ [DOI: 10.1101/2025.08.29.673069] |
56.8 GB | 6.57 Å |
| 2025-11-18 |  |
GLIC in MSP1E3D1 nanodisc at pH 7.5 (asolectin) [5188 multi-frame micrographs composed of 40 frames each in MRC format] | Bharambe N, Li Z, Seiferth D, Balakrishna AM, Biggin PC, Basak S [Pubmed: 38580666] [DOI: 10.1038/s41467-024-47370-w] |
1.5 TB | 3.42 Å |
| 2025-11-16 |  |
Single particle cryo-EM dataset of yeast SSU processome assembly intermediates [multiple data sets in TIFF and MRCS formats] | Buzovetsky OB [Pubmed: 41162712] [DOI: 10.1038/s41586-025-09688-3] |
187.0 TB | 2.65 - 5.96 Å |
| 2025-11-14 |  |
Cryo-tomography of 1.4 nm-HAN-594 labeled nucleosomes inside cells (ExoSloNano) [41 tilt series in TIFF format] | Young LN, Sherard A, Narasimhan M, Flaherty WA, Bennett E, Rosen MK, Giraldez AJ, Villa E, Zhou H, Shaikh F, Hutchings J, Riggi M | 6.5 GB | — |
| 2025-11-14 |  |
Cryo-tomography of 1.4 nm-HAN-488 labeled ribosomes inside cells (ExoSloNano) [49 tilt series in TIFF format] | Young LN, Sherard A, Bennett E, Rosen MK, Giraldez AJ, Villa E, Zhou H, Shaikh F, Hutchings J, Riggi M, Narasimhan M, Flaherty WA | 28.1 GB | — |
| 2025-11-14 |  |
Cryo-tomography of purified1.4 nm-HAN-488 labeled ribosomes from intact cells for validation of labeling method (ExoSloNano) [37 tilt series in TIFF format] | Young LN, Sherard A, Giraldez AJ, Villa E, Zhou H, Shaikh F, Hutchings J, Riggi M, Narasimhan M, Flaherty WA, Bennett E, Rosen MK | 168.9 GB | — |
| 2025-11-14 |  |
Cryo-tomography of 5 nm Nanogold labeled ribosomes from intact cells (ExoSloNano) [37 tilt series in TIFF format] | Young LN, Sherard A, Zhou H, Shaikh F, Hutchings J, Riggi M, Narasimhan M, Riggi M, Flaherty WA, Rosen MK, Giraldez AJ, Villa E [DOI: 10.1101/2024.10.12.617288] |
41.6 GB | — |
| 2025-11-13 |  |
Plasmodium berghei ookinete [1170 micrographs in TIFF format] | Henriksson S, Sandblad L, Billker O | 5.0 GB | — |
| 2025-11-13 |  |
Cryo-electron tomography of the MTEC transition zone [multiple data sets in MRC format] | McCafferty CL, van den Hoek H, Müller A, Van der Stappen P, Righetto RD, Stearns T, Engel BD [Pubmed: 41364719] [DOI: 10.1371/journal.pbio.3003519] |
1.1 TB | — |
| 2025-11-13 |  |
Cryo-electron microscopy of crosslinked LetAB from Escherichia coli [multiple data sets in TIFF format] | Santarossa CC, Ekiert DC, Bhabha G [Pubmed: 40166208] [DOI: 10.1101/2025.03.21.644421] |
6.8 TB | 2.8 - 3.5 Å |
| 2025-11-13 |  |
CryoEM movies of the IFIT2-IFIT3 heterodimer from Mus musculus [multiple data sets in MRC format] | Cook B, Corbett KD, Daugherty MD, Herzik Jr MA [Pubmed: 39990370] [DOI: 10.1101/2025.02.11.637299] |
497.6 GB | 3.22 Å |
| 2025-11-06 |  |
Human polymerase epsilon bound to PCNA and DNA in the nucleotide bound state [18426 multi-frame micrographs composed of 50 frames each in TIFF format] | Wang FW [Pubmed: 39245668] [DOI: 10.1038/s41467-024-52257-x] |
24.6 TB | 2.95 - 5.01 Å |
| 2025-11-06 |  |
SEM images of Mouse brain tissue sample [720 reconstructed volumes in TIFF format] | Slamková D | 6.0 GB | — |
| 2025-11-06 |  |
Single particle cryoEM data of Mycobacterium smegmatis EtfD [11952 multi-frame micrographs composed of 30 frames each in EER format] | Courbon GM, Rubinstein JL [Pubmed: 40462971] [DOI: 10.1101/2025.05.14.654035] |
6.0 TB | 3.2 Å |
| 2025-11-05 |  |
Escherichia coli SduA complex [multiple data sets in TIFF and MRC formats] | Luuk L, Jinek M [Pubmed: 39742808] [DOI: 10.1016/j.cell.2024.11.030] |
1.7 TB | 2.95 Å |
| 2025-11-05 |  |
GGCX-FIX data [13187 micrographs in MRC format] | Wu W, pengfei L | 1.1 TB | 2.62 Å |
| 2025-11-05 |  |
Cas1-2/3 integration complex, 32 bp foreign DNA without PAM, CRISPR leader-repeat-spacer DNA fragment [multiple data sets in TIFF format] | Henriques WS, Bowman J, Hall LN, Gauvin CC, Wei H, Kuang H, Zimanyi CM, Eng ET, Santiago-Frangos A, Wiedenheft B [Pubmed: 41072406] [DOI: 10.1016/j.str.2025.09.007] |
6.1 TB | 3.8 - 3.9 Å |
| 2025-11-04 |  |
Escherichia coli SduA complex bound to DNA [multiple data sets in TIFF and MRC formats] | Luuk L, Jinek M [Pubmed: 39742808] [DOI: 10.1016/j.cell.2024.11.030] |
1.7 TB | 2.84 Å |
| 2025-11-04 |  |
Single-particle cryo-EM of HSV-1 Origin Binding Protein bound to modified OriS [4021 multi-frame micrographs composed of 50 frames each in TIFF format] | Gustavsson E.G, Grünewald K.G, Elias P.E, Hällberg B.M.H [Pubmed: 41125242] [DOI: 10.1093/nar/gkaf1029] |
1.9 TB | 2.77 Å |
| 2025-11-04 |  |
Single-particle cryo-electron microscopy of the Cas1-2/3 heterohexamer [3293 multi-frame micrographs composed of 40 frames each in TIFF format] | Henriques WS, Bowman J, Hall LN, Gauvin CC, Wei H, Kuang H, Zimanyi CM, Eng ET, Santiago-Frangos A, Wiedenheft B [Pubmed: 41072406] [DOI: 10.1016/j.str.2025.09.007] |
765.6 GB | 3.5 Å |
| 2025-11-04 |  |
Cas1-Cas2/3 heterohexamer bound to foreign dsDNA fragment [2511 multi-frame micrographs composed of 40 frames each in MRC format] | Henriques WS, Bowman J, Hall LN, Gauvin CC, Wei H, Kuang H, Zimanyi CM, Eng ET, Santiago-Frangos A, Wiedenheft B [Pubmed: 41072406] [DOI: 10.1016/j.str.2025.09.007] |
1.7 TB | 3.31 Å |
| 2025-11-04 |  |
Cas1-2/3 integration complex, 34 bp foreign DNA with PAM, CRISPR leader-repeat-spacer DNA fragment [multiple data sets in TIFF format] | Henriques WS, Bowman J, Hall LN, Gauvin CC, Wei H, Kuang H, Zimanyi CM, Eng ET, Santiago-Frangos A, Wiedenheft B [Pubmed: 41072406] [DOI: 10.1016/j.str.2025.09.007] |
9.1 TB | 4.0 Å |
| 2025-10-30 |  |
Pichia pastoris mitochondrial complex I reconstituted into proteoliposomes [854 multi-frame micrographs composed of 33 frames each in MRC format] | Grba D.N., Hirst J. [Pubmed: 41032597] [DOI: 10.1126/sciadv.adz0693] |
537.1 GB | 4.7 - 20.0 Å |
| 2025-10-30 |  |
Pichia pastoris mitochondrial complex I reconstituted into cMSP26 nanodiscs [7574 multi-frame micrographs composed of 40 frames each in TIFF format] | Grba D.N., Hirst J. [Pubmed: 41032597] [DOI: 10.1126/sciadv.adz0693] |
1.0 TB | 2.8 - 3.8 Å |
| 2025-10-30 |  |
Single-particle cryo-EM of HSV-1 Origin Binding Protein bound to Hairpin-dT10 DNA [multiple data sets in TIFF format] | Gustavsson E.G, Grünewald K.G, Elias P.E, Hällberg B.M.H [Pubmed: 41125242] [DOI: 10.1093/nar/gkaf1029] |
6.2 TB | 2.9 - 4.38 Å |
