EMPIAR-11841
Automatically collected tilt series on cryoFIB milled lamellae of Baker's Yeast [multiple data sets in TIFF and MRC formats]
Publication:

Smart Parallel Automated Cryo Electron tomography

Eisenstein F, Fukuda Y, Danev R

bioRxiv (2023)

Related EMDB entry:
Deposited:
2023-12-12
Released:
2024-07-03
Last modified:
2024-07-03
Imageset size:
1.20 TB
Imageset DOI:
Experimental metadata:
Download xml json
Contains:
  • micrographs - multiframe
  • micrographs - single frame
  • stitched maps
  • tilt series
1. Unaligned frames for all tilts of all tilt series of Yeast lamellae using SPACEtomo
Category:
micrographs - multiframe
Image format:
TIFF
No. of images or tilt series:
41
Image size:
(4092, 5760)
Pixel type:
UNSIGNED BYTE
Pixel spacing:
(2.09, 2.09)
Details:
camera orientation: rotation by 90, flipped around y axis
Files:
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2. Projections of reconstructed tomograms using AreTomo2
Category:
micrographs - single frame
Image format:
MRC
No. of images or tilt series:
1
Image size:
(510, 720)
Pixel type:
32 BIT FLOAT
Pixel spacing:
(16.72, 16.72)
Details:
Automatically XY projections from AreTomo2 reconstructions of all tomograms for screening tilt series content.
Files:
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3. Montages of lamellae and grids collected by SPACEtomo
Category:
stitched maps
Image format:
MRC
No. of images or tilt series:
1
Image size:
(4092, 5760)
Pixel type:
SIGNED 16 BIT INTEGER
Pixel spacing:
(18.9, 18.9)
Details:
Montages of lamellae of varying sizes and full grids collected automatically by SPACEtomo
Files:
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4. Meta information in form of mdoc files for all tilt series
Category:
tilt series
Image format:
MRC
No. of images or tilt series:
41
Image size:
(None, None)
Pixel type:
UNSIGNED BYTE
Pixel spacing:
(2.09, 2.09)
Details:
All mdoc files (unsorted) without dose information. Dose was 4.35 e/A^2/tilt.
Files:
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Files:
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