Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2022-07-26 |  |
Human Kv1.3 with a Fab-ShK fusion [5079 multi-frame micrographs composed of 48 frames each in TIFF format] | Meyerson JR, Selvakumar P [Pubmed: 35788586] [DOI: 10.1038/s41467-022-31285-5] |
2.0 TB | 3.39 Å |
| 2022-07-26 |  |
Micrographs of PI3-kinase SH3 amyloid fibrils [multiple data sets in MRC format] | Röder C, Schröder GF [Pubmed: 31434882] [DOI: 10.1038/s41467-019-11320-8] |
32.0 GB | 3.4 Å |
| 2022-07-22 |  |
Structural conservation among variants of the SARS-CoV-2 spike postfusion bundle [multiple data sets in TIFF format] | Yang K, Brunger AT [Pubmed: 36940324] [DOI: 10.1073/pnas.2300360120] |
32.4 TB | 2.09 - 2.52 Å |
| 2022-07-22 |  |
Structure of the human RAD17-RFC clamp loader and 9-1-1 checkpoint clamp bound to a dsDNA-ssDNA junction [8271 multi-frame micrographs composed of 882 frames each in EER format] | Day M, Oliver AW, Pearl LH [Pubmed: 35819203] [DOI: 10.1093/nar/gkac588] |
4.4 TB | 3.59 Å |
| 2022-07-18 |  |
Staphylococcal self-loading helicases couple the staircase mechanism with inter domain high flexibility [3765 multi-frame micrographs composed of 40 frames each in TIFF format] | Qiao QCC, Mir Sanchis IMS [Pubmed: 35871290] [DOI: 10.1093/nar/gkac625] |
467.6 GB | 3.1 - 3.3 Å |
| 2022-07-18 |  |
Staphylococcal self-loading helicases couple the staircase mechanism 1 with inter domain high flexibility [3345 multi-frame micrographs composed of 40 frames each in MRC format] | Qiao C [Pubmed: 35871290] [DOI: 10.1093/nar/gkac625] |
1.6 TB | 3.9 - 3.96 Å |
| 2022-07-18 |  |
Cryo-EM structures of monomeric and dimeric human somatic angiotensin I-converting enzyme (apo form) [7689 multi-frame micrographs composed of 40 frames each in TIFF format] | Lubbe L, Sewell BT, Sturrock ED [Pubmed: 35818993] [DOI: 10.15252/embj.2021110550] |
3.8 TB | 3.63 - 4.34 Å |
| 2022-07-18 |  |
Structure of SARS-CoV-2 M protein in lipid nanodiscs [7588 multi-frame micrographs composed of 1251 frames each in EER format] | Dolan KA, Dutta M, Kern DM, Kotecha A, Voth GA, Brohawn SG [Pubmed: 36264056] [DOI: 10.7554/eLife.81702] |
4.0 TB | 3.52 Å |
| 2022-07-18 |  |
Thylakoid-located voltage-dependent chloride channel VCCN1 [multiple data sets in TIFF format] | Hagino T, Kato T, Kasuya G, Kobayashi K, Kusakizako T, Hamamoto S, Sobajima T, Fujiwara Y, Yamashita K, Kawasaki H, Maturana AD, Nishizawa T, Nureki O [Pubmed: 35523970] [DOI: 10.1038/s41467-022-30292-w] |
2.2 TB | 2.7 - 3.0 Å |
| 2022-07-18 |  |
CryoEM single particle dataset for psNb 2-67 with spike protein [1251 multi-frame micrographs composed of 40 frames each in TIFF format] | Xiang Y, Huang W, Liu H, Sang Z, Nambulli S, Tubiana J, Williams Jr KL, Duprex WP, Schneidman-Duhovny D, Wilson IA, Taylor DJ, Shi Y [Pubmed: 35738279] [DOI: 10.1016/j.celrep.2022.111004] |
699.6 GB | 2.7 Å |
| 2022-07-18 |  |
Structure of the Dicer-2-R2D2 heterodimer bound to a small RNA duplex [multiple data sets in TIFF format] | Yamaguchi S, Naganuma M, Nishizawa T, Kusakizako T, Tomari Y, Nishimasu H, Nureki O [Pubmed: 35768503] [DOI: 10.1038/s41586-022-04790-2] |
1.4 TB | 3.3 Å |
| 2022-07-18 |  |
CryoEM single particle dataset for psNb 1-8 with spike protein [3147 multi-frame micrographs composed of 40 frames each in TIFF format] | Xiang Y, Huang W, Liu H, Sang Z, Nambulli S, Tubiana J, Williams Jr KL, Duprex WP, Schneidman-Duhovny D, Wilson IA, Taylor DJ, Shi Y [Pubmed: 35738279] [DOI: 10.1016/j.celrep.2022.111004] |
1.9 TB | 2.7 Å |
| 2022-07-18 |  |
CryoEM single particle dataset for psNb 1-22 with spike protein [3610 multi-frame micrographs composed of 40 frames each in TIFF format] | Xiang Y, Huang W, Liu H, Sang Z, Nambulli S, Tubiana J, Williams Jr KL, Duprex WP, Schneidman-Duhovny D, Wilson IA, Taylor DJ, Shi Y [Pubmed: 35738279] [DOI: 10.1016/j.celrep.2022.111004] |
1.6 TB | 2.3 Å |
| 2022-07-18 |  |
CryoEM single particle dataset for psNb 2-10, 2-67 and 2-62 with spike protein [3168 multi-frame micrographs composed of 40 frames each in TIFF format] | Xiang Y, Huang W, Liu H, Sang Z, Nambulli S, Tubiana J, Williams KL, Duprex WP, Schneidman-Duhovny D, Wilson IA, Taylor DJ, Shi Y [Pubmed: 35738279] [DOI: 10.1016/j.celrep.2022.111004] |
1.4 TB | 3.6 Å |
| 2022-07-15 |  |
Single particle cryo-EM dataset of mouse heavy chain apoferritin in plunge-frozen vitrified ice [167 multi-frame micrographs composed of 30 frames each in MRC format] | Harder OF, Voss JM, Olshin PK, Drabbels M, Lorenz UJ [Pubmed: 35775987] [DOI: 10.1107/S205979832200554X] |
82.8 GB | 4.57 Å |
| 2022-07-15 |  |
Single particle cryo-EM dataset of mouse heavy chain apoferritin in laser-melted and revitrified ice [100 multi-frame micrographs composed of 30 frames each in MRC format] | Harder OF, Voss JM, Olshin PK, Drabbels M, Lorenz UJ [Pubmed: 35775987] [DOI: 10.1107/S205979832200554X] |
34.9 GB | 4.25 Å |
| 2022-07-15 |  |
Single particle cryo-EM dataset of cowpea chlorotic mottle virus in plunge-frozen vitrified ice [272 multi-frame micrographs composed of 30 frames each in MRC format] | Harder OF, Voss JM, Olshin PK, Drabbels M, Lorenz UJ [Pubmed: 35775987] [DOI: 10.1107/S205979832200554X] |
95.6 GB | 4.98 Å |
| 2022-07-15 |  |
Single particle cryo-EM dataset of cowpea chlorotic mottle virus in laser-melted and revitrified ice [451 multi-frame micrographs composed of 30 frames each in MRC format] | Harder OF, Voss JM, Olshin PK, Drabbels M, Lorenz UJ [Pubmed: 35775987] [DOI: 10.1107/S205979832200554X] |
153.9 GB | 5.2 Å |
| 2022-07-15 |  |
CryoEM single particle dataset for psNb 1-23 with spike protein [1872 multi-frame micrographs composed of 40 frames each in TIFF format] | Xiang Y, Huang W, Liu H, Sang Z, Nambulli S, Tubiana J, Williams Jr KL, Duprex WP, Schneidman-Duhovny D, Wilson IA, Taylor DJ, Shi Y [Pubmed: 35738279] [DOI: 10.1016/j.celrep.2022.111004] |
802.4 GB | 2.9 Å |
| 2022-07-15 |  |
CryoEM single particle dataset for psNb 2-65 with spike protein [1625 multi-frame micrographs composed of 40 frames each in TIFF format] | Xiang Y, Huang W, Liu H, Sang Z, Nambulli S, Tubiana J, Williams Jr KL, Duprex WP, Schneidman-Duhovny D, Wilson IA, Taylor DJ, Shi Y [Pubmed: 35738279] [DOI: 10.1016/j.celrep.2022.111004] |
932.2 GB | 3.2 Å |
| 2022-07-15 |  |
CryoEM single particle dataset for psNb 2-45 with spike protein [2062 multi-frame micrographs composed of 40 frames each in TIFF format] | Xiang Y, Huang W, Liu H, Sang Z, Nambulli S, Tubiana J, Williams Jr KL, Duprex WP, Schneidman-Duhovny D, Wilson IA, Taylor DJ, Shi Y [Pubmed: 35738279] [DOI: 10.1016/j.celrep.2022.111004] |
873.7 GB | 2.6 Å |
| 2022-07-12 |  |
C2-symmetric single-particle cryo-EM map of T. vaginalis FDPF3 - unaligned multi-frame micrographs [stack of 7398 particles in TIFF format] | Bell TA [Pubmed: 35780837] [DOI: 10.1016/j.jbc.2022.102210] |
1.4 TB | 6.6 - 6.8 Å |
| 2022-07-12 |  |
CryoEM data of PLA2R at pH 6.2 with both 0 and 30 degree tilts. [multiple data sets in TIFF format] | Lockhart-Cairns MP [Pubmed: 35858348] [DOI: 10.1073/pnas.2202209119] |
2.1 TB | 3.4 Å |
| 2022-07-12 |  |
In situ cryo-electron tomography of T. kivui cells [multiple data sets in MRC and TIFF formats] | Dietrich HM, Righetto RD, Kumar A, Wietrzynski W, Trischler R, Schuller SK, Wagner J, Schwarz FM, Engel BD, Müller V, Schuller JM [Pubmed: 35859174] [DOI: 10.1038/s41586-022-04971-z] |
373.4 GB | 17.0 Å |
| 2022-07-12 |  |
Single particle Data of the activated B. subtilis ClpC arranged as a tetramer of hexamers [4002 multi-frame micrographs composed of 40 frames each in MRC format] | Morrale FE, Meinhart A, Haselbach D, Clausen T [Pubmed: 35662409] [DOI: 10.1016/j.cell.2022.05.009] |
3.1 TB | 3.7 - 10.0 Å |
