Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2022-07-12 |  |
Human Kv1.3 [multiple data sets in TIFF format] | Meyerson JR, Selvakumar P [Pubmed: 35788586] [DOI: 10.1038/s41467-022-31285-5] |
1.4 TB | 2.89 Å |
| 2022-07-12 |  |
Non-conventional octameric structure of C-phycocyanin [2036 multi-frame micrographs composed of 49 frames each in TIFF format] | Minato T, Teramoto T, Adachi N, Hung NK, Yamada K, Kawasaki M, Akutsu M, Moriya T, Senda T, Ogo S, Kakuta Y, Yoon KS [Pubmed: 34716405] [DOI: 10.1038/s42003-021-02767-x] |
1.8 TB | 3.06 - 3.71 Å |
| 2022-07-12 |  |
CryoEM single particle dataset for psNb 2-34 with spike protein [2660 multi-frame micrographs composed of 40 frames each in TIFF format] | Xiang Y, Huang W, Liu H, Sang Z, Nambulli S, Tubiana J, Williams Jr KL, Duprex WP, Schneidman-Duhovny D, Wilson IA, Taylor DJ, Shi Y [Pubmed: 35738279] [DOI: 10.1016/j.celrep.2022.111004] |
1021.3 GB | 2.9 Å |
| 2022-07-12 |  |
CryoEM single particle dataset for psNb 2-38 with spike protein [1901 multi-frame micrographs composed of 40 frames each in TIFF format] | Xiang Y, Huang W, Liu H, Sang Z, Nambulli S, Tubiana J, Williams Jr KL, Duprex WP, Schneidman-Duhovny D, Wilson IA, Taylor DJ, Shi Y [Pubmed: 35738279] [DOI: 10.1016/j.celrep.2022.111004] |
791.0 GB | 2.9 Å |
| 2022-07-12 |  |
CryoEM single particle dataset for psNb 2-57 with spike protein [3485 multi-frame micrographs composed of 40 frames each in TIFF format] | Xiang Y, Huang W, Liu H, Sang Z, Nambulli S, Tubiana J, Williams Jr KL, Duprex WP, Schneidman-Duhovny D, Wilson IA, Taylor DJ, Shi Y [Pubmed: 35738279] [DOI: 10.1016/j.celrep.2022.111004] |
1.4 TB | 2.9 Å |
| 2022-07-08 |  |
Cryo-EM structure of human KCC1 bound with inhibitor VU0463271 [5833 multi-frame micrographs composed of 40 frames each in TIFF format] | Cao E [Pubmed: 35759661] [DOI: 10.1073/pnas.2109083119] |
3.9 TB | 3.5 Å |
| 2022-07-08 |  |
Minimal protein-only RNase P structure reveals insights into tRNA precursor recognition and catalysis [2370 multi-frame micrographs composed of 48 frames each in TIFF format] | Teramoto T, Koyasu T, Adachi N, Kawasaki M, Moriya T, Numata T, Senda T, Kakuta Y [Pubmed: 34339732] [DOI: 10.1016/j.jbc.2021.101028] |
2.0 TB | 3.62 Å |
| 2022-07-01 |  |
Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2 [8056 multi-frame micrographs composed of 31 frames each in TIFF format] | Basu RS, Sherman MB, Gagnon MG [Pubmed: 35697706] [DOI: 10.1038/s41467-022-31129-2] |
1.7 TB | 2.6 - 3.6 Å |
| 2022-07-01 |  |
Single-particle cryo-EM dataset of the Vairimorpha necatrix ribosome [3284 multi-frame micrographs composed of 32 frames each in TIFF format] | Barandun J, Hunziker M, Vossbrinck CR, Klinge S [Pubmed: 31332387] [DOI: 10.1038/s41564-019-0514-6] |
1.0 TB | 3.26 - 3.7 Å |
| 2022-06-27 |  |
DNA polymerase D temporarily connects primase to the CMG-like helicase before interacting with proliferating cell nuclear antigen [2378 multi-frame micrographs composed of 39 frames each in TIFF format] | Oki K, Yamagami T, Nagata M, Mayanagi K, Shirai T, Adachi N, Numata T, Ishino S, Ishino Y [Pubmed: 33849056] [DOI: 10.1093/nar/gkab243] |
1.7 TB | 7.1 Å |
| 2022-06-22 |  |
Cryo-EM structure of a dimeric B-Raf:14-3-3 complex reveals asymmetry in the active sites of B-Raf kinases [multiple data sets in MRCS and MRC formats] | Kondo Y, Ognjenovic J, Banerjee S, Karandur D, Merk A, Kulhanek K, Wong K, Roose JP, Subramaniam S, Kuriyan J [Pubmed: 31604311] [DOI: 10.1126/science.aay0543] |
934.3 GB | 3.9 Å |
| 2022-06-22 |  |
single particle cryo-EM of red blood cell lysate (hemolysate, hemoglobin reduced, filtered by SEC) [6608 multi-frame micrographs composed of 20 frames each in TIFF format] | Verbeke EJ [Pubmed: 35858567] [DOI: 10.1016/j.celrep.2022.111103] |
1.0 TB | 3.4 Å |
| 2022-06-22 |  |
Processed FIB-SEM images of murine hypothalamus-derived GT1-7 neuronal cells [multiple data sets in TIFF format] | Peddie CJ, Collinson LM [DOI: 10.3389/fcell.2022.819571] |
140.5 GB | — |
| 2022-06-22 |  |
Cryo electron microscopy of inactive hyaluronan synthase with UDP-GlcNAc [9026 multi-frame micrographs composed of 40 frames each in TIFF format] | Maloney FP, Kuklewicz J, Zimmer J [Pubmed: 35355017] [DOI: 10.1038/s41586-022-04534-2] |
2.3 TB | 2.7 - 3.1 Å |
| 2022-06-21 |  |
Cryo-EM structure of the plant 26S proteasome [multiple data sets in TIFF format] | Kandolf S, Grishkovskaya I, Meinhart A, Haselbach D [Pubmed: 35576154] [DOI: 10.1016/j.xplc.2022.100310] |
7.9 TB | 3.3 Å |
| 2022-06-21 |  |
Cryo-electron microscopy reconstruction of ATP-bound PCAT1 in an outward-facing conformation in a Mg2+ free condition [5994 multi-frame micrographs composed of 50 frames each in TIFF format] | Kieuvongngam V, Chen J [Pubmed: 35074919] [DOI: 10.1073/pnas.2120534119] |
2.6 TB | 4.5 Å |
| 2022-06-21 |  |
Cryo-electron microscopy reconstruction of PCAT1 in three distinct inward-facing conformations during ATP turnover condition [11966 multi-frame micrographs composed of 50 frames each in TIFF format] | Kieuvongngam V, Chen J [Pubmed: 35074919] [DOI: 10.1073/pnas.2120534119] |
5.2 TB | 3.7 - 4.1 Å |
| 2022-06-20 |  |
Cryo-EM data used for the determination of the structures of LACV-L in 3 different states: replication initiation state, transcription capped primer active site entry state and transcription initiation state [14341 multi-frame micrographs composed of 40 frames each in TIFF format] | Arragain B, Durieux Trouilleton Q, Baudin F, Provaznik J, Azevedo N, Cusack S, Schoehn G, Malet H [Pubmed: 35173159] [DOI: 10.1038/s41467-022-28428-z] |
2.2 TB | 2.8 - 3.6 Å |
| 2022-06-17 |  |
Cryo electron micrographs of Tetrahymena thermophila solubilized mitochondrial membrane complexes - Glacios data [multiple data sets in TIFF and MRC formats] | Letts JA, Zhou L, Guo F [Pubmed: 35357889] [DOI: 10.1126/science.abn7747] |
9.9 TB | 3.02 Å |
| 2022-06-17 |  |
Single particle cryogenic electron micrographs of tetrahymena mitochondrial electron transport chain complexes [multiple data sets in TIFF and MRC formats] | Zhou L, Guo F, Letts JA [Pubmed: 35357889] [DOI: 10.1126/science.abn7747] |
7.8 TB | 2.6 Å |
| 2022-06-17 |  |
The complex of phosphorylated human cystic fibrosis transmembrane conductance regulator (CFTR) with ATP/Mg and Lumacaftor (VX-809) [7650 multi-frame micrographs composed of 60 frames each in TIFF format] | Fiedorczuk K, Chen J [Pubmed: 34995514] [DOI: 10.1016/j.cell.2021.12.009] |
5.8 TB | 2.7 Å |
| 2022-06-17 |  |
E. coli 50S ribosome bound to compounds VM2 and VS1 [multiple data sets in TIFF and MRC formats] | Pellegrino J, Lee DJ, Fraser JS, Seiple IB | 1.3 TB | 2.29 Å |
| 2022-06-14 |  |
Transmission electron micrographs of mouse RNF213 in a chemically-stabilized complex with human UBE2L3 [4591 multi-frame micrographs composed of 40 frames each in TIFF format] | Ahel J, Weis F, Clausen T | 2.1 TB | 3.5 Å |
| 2022-06-14 |  |
Transmission electron micrographs of mouse RNF213 incubated with ATPγS [multiple data sets in TIFF format] | Ahel J, Weis F, Clausen T | 2.3 TB | 4.0 Å |
| 2022-06-14 |  |
Parallel cryo electron tomography (PACE-tomo) of 80S ribosomes in situ [multiple data sets in MRC format] | Eisenstein F, Danev R [Pubmed: 36456783] [DOI: 10.1038/s41592-022-01690-1] |
132.3 GB | 8.2 Å |
