EMPIAR-11138 - Cryo-EM structure of DfgA-B at 2.54 angstrom resolution [1664 multi-frame micrographs composed of 62 frames each in TIFF format]

EMPIAR-11138

Cryo-EM structure of DfgA-B at 2.54 angstrom resolution [1664 multi-frame micrographs composed of 62 frames each in TIFF format]

Publication:

C-Glycoside metabolism in the gut and in nature: Identification, characterization, structural analyses and distribution of C-C bond-cleaving enzymes

Mori T, Kumano T, He H, Watanabe S, Senda M, Moriya T, Adachi N, Hori S, Terashita Y, Kawasaki M, Hashimoto Y, Awakawa T, Senda T, Abe I, Kobayashi M

Nature Communications 12 (2021)

PMID: 34728636

DOI: 10.1038/s41467-021-26585-1

Related EMDB entry:

EMD-30809

Deposited:

2022-07-22

Released:

2022-09-20

Last modified:

2022-09-20

Imageset size:

1.68 TB

Imageset DOI:

10.6019/EMPIAR-11138

Experimental metadata:

Download xml json

Deposited via PDBj

Contains:

micrographs - multiframe

Image Sets

1. Cryo-EM structure of DfgA-B at 2.54 angstrom resolution

Category:

micrographs - multiframe

Image format:

TIFF

No. of images or tilt series:

1664

Image size:

(4096, 4096)

Pixel type:

SIGNED 16 BIT INTEGER

Pixel spacing:

(0.69, 0.69)

Details:

HT: 200 kV, Cs: 2.7 mm, Flux: 0.81 e/Å2/frame

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Citations

prismPYP: Power-spectrum and image domain learning for self-supervised micrograph evaluation.

He L, Bartesaghi A. (2026)

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Deng Y, Wang S, Xiang M, Li Y, Zhuo L, Cao D, Fu X, Zou Q. (2026)

Chart builder: an interactive tool for user driven data visualization in the electron microscopy data bank.

Fonseca N, Duraisamy AK, Wang Z, Somasundharam S, Tayebinia M, de Oliveira LC, Ma M, Turner J, Patwardhan A, Kleywegt GJ, Hartley M, Morris KL. (2026)

CryoVirusDB: An Annotated Dataset for AI-Based Virus Particle Identification in Cryo-EM Micrographs.

Gyawali R, Dhakal A, Wang L, Cheng J. (2026)

Deep-learning methods for contrast enhancement and artifact reduction in cryo-electron tomography: a systematic analysis of the state of the art and proposed improvements.

Jones HN, Deshmukh A, Pande K. (2026)

CryoGS: High-Quality Cryo-EM Homogeneous Reconstruction by Gaussian Splatting

Zeng B, Liu S, Cheng S, Xu G, Fan H. (2026)

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Wang X, Mo Z, Li F, Zhang F, Wan X. (2026)

ICECREAM: high-fidelity equivariant cryo-electron tomography.

Kishore V, Debarnot V, Righetto RD, Engel BD, Dokmanić I. (2026)

CryoSift: an accessible and automated CNN-driven tool for cryo-EM 2D class selection.

Schäfer JH, Calza A, Hom K, Damodar P, Peng R, Bogdanović N, Lander GC, Stagg SM, Cianfrocco MA. (2025)