Due to a storage failure, some data files are currently inaccessible (Markted: Incomplete dataset).
We are currently working to restore, but we are accepting priority requests.(email, inquiry).
We are restoring lost files from backups in the following order:
We apologize for the inconvenience and appreciate your understanding.
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2022-09-12 | Structures of the Cyanobacterial Phycobilisome in the Light-harvesting and Photoprotected States [multiple data sets in MRC and TIFF formats] | Sauer PV, Dominguez-Martin MA, Kerfeld CA [Pubmed: 36045294] [DOI: 10.1038/s41586-022-05156-4] |
16.7 TB | 2.1 - 3.5 Å | |
| 2024-11-08 | Cryo-EM SPA datasets of Streptococcus pneumoniae NADPH oxidase F397A mutant with NADPH under turnover conditions [multiple data sets in EER format] | Dubach VRA, San Segundo-Acosta P, Murphy BJ [Pubmed: 39039317] [DOI: 10.1038/s41594-024-01348-w] |
16.6 TB | 2.64 Å | |
| 2026-05-31 | Single-particle cryo-EM structures of E. coli 70S ribosomes, WT and mutants with trapped RNA conformational ground and excited states [multiple data sets in TIFF and MRC formats] | Steinmetzger C, Riad M, Petzold K [DOI: 10.64898/2026.05.08.718354] |
16.6 TB | 1.98 - 3.53 Å | |
| 2023-02-01 | Single particle cryogenic electron micrographs of respiratory supercomplex I+III2 from Vigna radiata [multiple data sets in TIFF format] | Maldonado M, Letts JA [Pubmed: 36581760] [DOI: 10.1038/s41477-022-01306-8] |
16.4 TB | 3.2 Å | |
| 2022-05-20 | Single-particle reconstruction of Tick-borne encephalitis virus (Final reconstruction) [multiple data sets in TIFF format] | Pulkkinen LIA, Barrass SV, Domanska A, Överby AK, Anastasina M, Butcher SJ [Pubmed: 35458522] [DOI: 10.3390/v14040792] |
16.4 TB | 3.3 Å | |
| 2021-10-25 | Cryo-EM micrographs of human ABCA1 [9819 multi-frame micrographs composed of 32 frames each in MRC format] | Qian H, Zhao X, Cao P, Lei J, Yan N, Gong X [Pubmed: 28602350] [DOI: 10.1016/j.cell.2017.05.020] |
16.3 TB | 4.1 Å | |
| 2026-05-05 | Raw multi-frame images of SUR1/Kir6.2 ATP-sensitive potassium channel in the presence of Aekatperone and ATP [31513 multi-frame micrographs composed of 74 frames each in TIFF format] | Driggers CM, Elsheikh A, Shyng SL [Pubmed: 40135739] [DOI: 10.7554/eLife.103159] |
16.3 TB | 4.1 Å | |
| 2025-11-18 | Cryo Electron Microscopy of hIAPP A25P, S28P and S29P mutants [multiple data sets in TIFF and EER formats] | Ooi SA, Valli D, Maj M [Pubmed: 40850490] [DOI: 10.1016/j.jmb.2025.169405] |
16.2 TB | 3.0 - 4.07 Å | |
| 2025-10-16 | Supporting cryo-EM datasets of virus-like particles [multiple data sets in TIFF format] | Kavcic L, Kezar A, Kisovec M [Pubmed: 38233506] [DOI: 10.1038/s42004-024-01100-x] |
16.0 TB | 2.41 - 12.75 Å | |
| 2024-06-16 | Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES) [ three datasets, in TIF format] [multiple data sets in TIFF format] | Zhao Y, Rai J, Li H [Pubmed: 37595043] [DOI: 10.1126/sciadv.adg8190] |
16.0 TB | 2.2 - 2.87 Å | |
| 2025-09-02 | In situ insights into antibody-neutralization of a pre-fusion Junin virus glycoprotein complex [41612 multi-frame micrographs composed of 40 frames each in TIFF format] | Rodriguez JAR, Taylor LJT [Pubmed: 40632652] [DOI: 10.1016/j.celrep.2025.115971] |
16.0 TB | 3.8 Å | |
| 2019-10-14 | PolyA polymerase module of the cleavage and polyadenylation factor (CPF) from Saccharomyces cerevisiae [multiple data sets in MRCS format] | Casanal A, Kumar A, Hill CH, Emsley P, Passmore LA [Pubmed: 29074584] [DOI: 10.1126/science.aao6535] |
15.4 TB | 3.55 Å | |
| 2025-09-04 | Structure of the C-terminal protease CtpA-LbcA complex of Pseudomonas aeruginosa [26257 multi-frame micrographs composed of 75 frames each in TIFF format] | Hsu HC, Li H [Pubmed: 38467832] [DOI: 10.1038/s44318-024-00069-6] |
15.1 TB | 3.55 - 4.14 Å | |
| 2025-10-21 | Cryo-EM structure of Arf1-decorated tubules [12483 multi-frame micrographs composed of 40 frames each in EER format] | Haupt C, Semchonok DA, Daum S, Neudorf SS, Hamdi F, Kastritis P, Stubbs MT, Bacia K [DOI: 10.64898/2026.01.22.700998] |
15.0 TB | 3.1 - 3.79 Å | |
| 2023-07-25 | Single-particle cryo-EM dataset of the complex between ALC1 and a PARylated nucleosome [multiple data sets in TIFF and MRCS formats] | Bacic L, Gaullier G, Deindl S [Pubmed: 34486521] [DOI: 10.7554/eLife.71420] |
14.9 TB | 4.8 - 10.0 Å | |
| 2025-10-29 | Progesterone-bound DB3 Fab in complex with computationally designed DBPro1156_2 protein binder [multiple data sets in MRC format] | Marchand A, Buckley S, Schneuing A, Pacesa M, Elia M, Gainza P, Elizarova E, Neeser RM, Lee PW, Reymond L, Miao Y, Scheller L, Georgeon S, Schmidt J, Schwaller P, Maerkl SJ, Bronstein M, Correia BE [Pubmed: 39814890] [DOI: 10.1038/s41586-024-08435-4] |
14.6 TB | 3.3 Å | |
| 2026-01-11 | Electron cryomicroscopy of NSF, the binary SNARE complex of SNAP-25 and syntaxin-1a, and alpha-SNAP under non-hydrolyzing conditions [multiple data sets in TIFF and MRC formats] | White KI, Brunger AT [Pubmed: 40993127] [DOI: 10.1038/s41467-025-62764-0] |
14.6 TB | 2.95 - 4.01 Å | |
| 2025-12-23 | Single-particle cryo-EM data of the quaternary complex of ReChb - crRNA - target dsDNA - collateral dsDNA [34123 multi-frame micrographs composed of 50 frames each in TIFF format] | Tascon I, Lopez-Alonso JP, Ubarretxena-Belandia I [Pubmed: 39482449] [DOI: 10.1038/s41587-024-02461-3] |
14.5 TB | 3.08 Å | |
| 2023-09-22 | Structure of TDP-43 amyloid filaments from type A FTLD-TDP (individual 1) [91457 multi-frame micrographs composed of 40 frames each in TIFF format] | Arseni D, Ryskeldi-Falcon B [Pubmed: 37532939] [DOI: 10.1038/s41586-023-06405-w] |
14.5 TB | 2.39 Å | |
| 2022-02-28 | Structural visualization of de novo initiation of RNA polymerase II transcription [multiple data sets in TIFF format] | Yang C, Fujiwara R, Kim HJ, Basnet P, Zhu Y, Gorbea Colón JJ, Steimle S, Garcia BA, Kaplan CD, Murakami K [Pubmed: 35051353] [DOI: 10.1016/j.molcel.2021.12.020] |
14.3 TB | 3.0 - 7.6 Å | |
| 2021-06-25 | The structure of human CST reveals a decameric assembly bound to telomeric DNA [multiple data sets in TIFF and MRC formats] | Lim C, Barbour AT, Zaug AJ, Goodrich KJ, McKay AE, Wuttke DS, Cech TR [Pubmed: 32499435] [DOI: 10.1126/science.aaz9649] |
14.3 TB | 3.0 Å | |
| 2025-04-20 | Cryo-EM micrographs of Vipp1-F197K/L200K helical filaments (Vipp1-F197K/L200K) [30314 multi-frame micrographs composed of 44 frames each in TIFF format] | Naskar S, Low HH [Pubmed: 39528797] [DOI: 10.1038/s41594-024-01401-8] |
14.1 TB | 3.67 Å | |
| 2026-03-04 | CryoEM dataset of M. mazei topoisomerase VI(A:E342Q)-minicircle DNA complex [26728 multi-frame micrographs composed of 1233 frames each in EER format] | Richman DE, Berger JM [Pubmed: 41698922] [DOI: 10.1038/s41467-026-69491-0] |
14.1 TB | 2.5 - 2.7 Å | |
| 2025-10-22 | Single-particle cryo-electron microscopy of PlPVC1 particle in contracted state - raw micrographs [17274 multi-frame micrographs composed of 1494 frames each in EER format] | Marín-Arraiza L., Taylor N.M.I. [Pubmed: 41125615] [DOI: 10.1038/s41467-025-64377-z] |
14.0 TB | 3.1 - 10.0 Å | |
| 2021-11-30 | Cryo-EM dataset of the substrate-engaged human 26S proteasome [44688 micrographs in MRC format] | Dong Y, Zhang S, Wu Z, Wang WL, Mao Y [Pubmed: 30479383] [DOI: 10.1038/s41586-018-0736-4] |
13.9 TB | 2.8 - 3.6 Å |