Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2021-03-19 |  |
Complex of yeast cytoplasmic dynein MTBD-High and MT with DTT [624 multi-frame micrographs composed of 40 frames each in TIFF format] | Komori Y, Nishida N, Takarada O, Watanabe A, Tamura S, Kubo S, Shimada I, Kikkawa M [Pubmed: 32098965] [DOI: 10.1038/s41467-020-14842-8] |
124.3 GB | 3.62 Å |
| 2021-03-12 |  |
Beta-galactosidase in complex with PETG [562 multi-frame micrographs composed of 75 frames each in TIFF format] | Saur M, Hartshorn MJ, Dong J, Reeks J, Bunkoczi G, Jhoti H, Williams PA [Pubmed: 31877353] [DOI: 10.1016/j.drudis.2019.12.006] |
720.1 GB | 2.2 Å |
| 2021-03-12 |  |
Beta-galactosidase in complex with deoxygalacto-nojirimycin [598 multi-frame micrographs composed of 75 frames each in TIFF format] | Saur M, Hartshorn MJ, Dong J, Reeks J, Bunkoczi G, Jhoti H, Williams PA [Pubmed: 31877353] [DOI: 10.1016/j.drudis.2019.12.006] |
765.8 GB | 2.3 Å |
| 2021-03-12 |  |
Beta-galactosidase in complex with L-ribose [517 multi-frame micrographs composed of 75 frames each in TIFF format] | Saur M, Hartshorn MJ, Dong J, Reeks J, Bunkoczi G, Jhoti H, Williams PA [Pubmed: 31877353] [DOI: 10.1016/j.drudis.2019.12.006] |
669.1 GB | 2.3 Å |
| 2021-03-12 |  |
PKM2 in complex with L-threonine [476 multi-frame micrographs composed of 75 frames each in TIFF format] | Saur M, Hartshorn MJ, Dong J, Reeks J, Bunkoczi G, Jhoti H, Williams PA [Pubmed: 31877353] [DOI: 10.1016/j.drudis.2019.12.006] |
620.8 GB | 2.6 Å |
| 2021-03-12 |  |
PKM2 in complex with Compound 5 [707 multi-frame micrographs composed of 60 frames each in TIFF format] | Saur M, Hartshorn MJ, Dong J, Reeks J, Bunkoczi G, Jhoti H, Williams PA [Pubmed: 31877353] [DOI: 10.1016/j.drudis.2019.12.006] |
773.8 GB | 3.2 Å |
| 2021-03-12 |  |
PKM2 in complex with Compound 10 [572 multi-frame micrographs composed of 75 frames each in TIFF format] | Saur M, Hartshorn MJ, Dong J, Reeks J, Bunkoczi G, Jhoti H, Williams PA [Pubmed: 31877353] [DOI: 10.1016/j.drudis.2019.12.006] |
745.1 GB | 2.7 Å |
| 2021-03-12 |  |
PKM2 in complex with Compound 6 [590 multi-frame micrographs composed of 75 frames each in TIFF format] | Saur M, Hartshorn MJ, Dong J, Reeks J, Bunkoczi G, Jhoti H, Williams PA [Pubmed: 31877353] [DOI: 10.1016/j.drudis.2019.12.006] |
768.0 GB | 2.5 Å |
| 2021-03-05 |  |
Structure of the human U4/U6.U5 tri-snRNP [4812 micrographs in MRC format] | Stark H [Pubmed: 26912367] [DOI: 10.1126/science.aad2085] |
300.9 GB | 7.0 Å |
| 2021-03-05 |  |
3.2 Å resolution structure of a functional monomeric Photosystem I from Thermosynechococcus elongatus BP-1 by single particle cryo-EM with a 200 kV CRYO ARM electron microscope [904 multi-frame micrographs composed of 60 frames each in TIFF format] | Coruh O, Frank A, Tanaka H, Kawamoto A, El-Mohsnawy E, Kato T, Namba K, Gerle C, Nowaczyk MM, Kurisu G [Pubmed: 33686186] [DOI: 10.1038/s42003-021-01808-9] |
226.1 GB | 3.2 Å |
| 2021-03-05 |  |
Movies of a heptameric light-harvesting 2 complex from the marine purple bacterium Mch. purpuratum [9543 multi-frame micrographs composed of 42 frames each in MRCS format] | Gardiner AT, Naydenova K, Castro-Hartmann P, Nguyen-Phan TC, Russo CJ, Sader K, Hunter CN, Cogdell RJ, Qian P [Pubmed: 33579696] [DOI: 10.1126/sciadv.abe4650] |
6.0 TB | 2.38 Å |
| 2021-03-05 |  |
Dynabeads as Fiducials for SXT and SIM Correlation [700 tilt series in MRC format] | Okolo CA, Kounatidis I, Groen J, Nahas KL, Balint S, Fish T, Koronfel MA, López-Cortajarena A, Dobbie I, Pereiro E, Harkiolaki M | 1.2 GB | — |
| 2021-03-05 |  |
Fluorescent Au as Fiducials for SXT and SIM Correlation [700 tilt series in MRC format] | Okolo CA, Kounatidis I, Groen J, Nahas KL, Balint S, Fish T, Koronfel MA, López-Cortajarena A, Dobbie I, Pereiro E, Harkiolaki M | 3.6 GB | — |
| 2021-03-05 |  |
Fluorescent NanoDiamonds as Fiducials for SXT and SIM Correlation [700 tilt series in MRC format] | Okolo CA, Kounatidis I, Groen J, Nahas KL, Balint S, Fish T, Koronfel MA, López-Cortajarena A, Dobbie I, Pereiro E, Harkiolaki M | 2.5 GB | — |
| 2021-03-05 |  |
Lipid Droplets as Fiducials for SXT and SIM Correlation [700 tilt series in MRC format] | Okolo CA, Kounatidis I, Groen J, Nahas KL, Balint S, Fish T, Koronfel MA, López-Cortajarena A, Dobbie I, Pereiro E, Harkiolaki M | 4.8 GB | — |
| 2021-03-05 |  |
Cryo-EM of Multiple System Atrophy seeded assembly of alpha-synuclein filaments [multiple data sets in TIFF and MRCS formats] | Lövestam S, Goedert M, Scheres S [Pubmed: 33548114] [DOI: 10.1002/2211-5463.13110] |
1.1 TB | 3.18 - 4.23 Å |
| 2021-03-03 |  |
Cryo electron microscopy of alpha-synuclein H50Q fibrils [3577 multi-frame micrographs composed of 30 frames each in MRC format] | Boyer DR, Li B, Sun C, Fan W, Sawaya MR, Jiang L, Eisenberg DS [Pubmed: 31695184] [DOI: 10.1038/s41594-019-0322-y] |
595.3 GB | 3.3 Å |
| 2021-02-26 |  |
Cryo electron tomography of muscle tissue lamella from mice [1 tilt series in MRC format] | Zhang J, Zhang D, Sun L, Ji G, Huang X, Niu T, Xu J, Ma C, Zhu Y, Gao N, Xu W, Sun F [Pubmed: 34174447] [DOI: 10.1016/j.jsb.2021.107763] |
1.3 GB | — |
| 2021-02-19 |  |
Cryo-EM structure of the mammalian ATP synthase tetramer bound to inhibitory protein IF1 (Part1) [2659 micrographs in MRC format] | Gu J, Zhang L, Zong S, Guo R, Liu T, Yi J, Wang P, Zhuo W, Yang M [Pubmed: 31197009] [DOI: 10.1126/science.aaw4852] |
141.3 GB | 3.34 - 6.2 Å |
| 2021-02-19 |  |
Single Particle Cryo-EM Reconstructions of NCP-CHD4 complexes [multiple data sets in TIFF and MRC formats] | Farnung L, Cramer P [Pubmed: 32543371] [DOI: 10.7554/eLife.56178] |
721.2 GB | 3.1 - 4.0 Å |
| 2021-02-19 |  |
Negative-stained transmission electron microscopy of the nucleosome remodelling and deacetylase complex purified from murine erythroleukemia cells. [1323 micrographs in MRC format] | Mackay JP, Landsberg MJ, Jackman MJ [Pubmed: 33264611] [DOI: 10.1016/j.celrep.2020.108450] |
82.7 GB | 14.0 Å |
| 2021-02-19 |  |
CryoEM structure of the LCD of hnRNPA2 amyloid-like fibrils [3937 multi-frame micrographs composed of 2 frames each in MRC format] | Lu J, Cao Q, Hughes MP, Sawaya MR, Boyer DR, Cascio D, Eisenberg DS [Pubmed: 32796831] [DOI: 10.1038/s41467-020-17905-y] |
1.2 TB | 3.1 Å |
| 2021-02-19 |  |
Apoferritin structure at 1.36 angstrom resolution determined from a 300 kV Titan Krios G3i electron microscope with Falcon4 detector [7734 multi-frame micrographs composed of 40 frames each in MRC format] | Zhang K, Pintilie GD, Li S, Schmid MF, Chiu W [Pubmed: 33139928] [DOI: 10.1038/s41422-020-00432-2] |
3.7 TB | 1.36 Å |
| 2021-02-17 |  |
Single particle cryo-EM dataset of Mus musculus mitochondrial complex I with ND6 P25L mutation [1492 multi-frame micrographs composed of 40 frames each in MRC format] | Yin Z, Bridges HR, Grba D, Hirst J [Pubmed: 33514727] [DOI: 10.1038/s41467-021-20942-w] |
3.1 TB | 3.82 Å |
| 2021-02-17 |  |
Raw cryo- and negative stain micrographs of a native extract from C. thermophilum used to reconstruct oxo acid dehydrogenase complexes [0 multi-frame micrographs composed of 0 frames each in MRC format] | Kastritis PLK [DOI: 10.1016/j.celrep.2021.108727] |
5.4 TB | 6.9 Å |
