The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
Release date | Imageset | Title | Authors and references | Size | Resolution |
---|---|---|---|---|---|
2021-05-21 | Tilt series of dividing vegetative and sporulating cells of Bacillus subtilis from the manuscript - Khanna et al., 2021 [multiple data sets in MRC format] | Khanna K, Lopez-Garrido J, Sugie J, Pogliano K, Villa E [Pubmed: 34018921] [DOI: 10.7554/eLife.62204] |
8.7 GB | — | |
2021-05-17 | Single-Particle CryoEM of Human Apoferritin Light Chain Vitrified Using Back-it-up [multiple data sets in MRCS and MRC formats] | Tan YZ, Rubinstein JL [Pubmed: 33135680] [DOI: 10.1107/S2059798320012474] |
2.1 TB | 2.0 Å | |
2021-05-16 | Cryo-EM structure of a thermostable encapsulin from T. maritima [2771 multi-frame micrographs composed of 67 frames each in TIFF format] | Wiryaman TI, Toor N [Pubmed: 33953921] [DOI: 10.1107/S2052252521001949] |
1.6 TB | 2.0 Å | |
2021-05-16 | Human WLS in complex with WNT8A [7849 multi-frame micrographs composed of 50 frames each in TIFF format] | Nygaard R, Jia Y, Kim J, Ross D, Parisi G, Clarke O.B., Virshup D.M., Mancia F. [Pubmed: 33357447] [DOI: 10.1016/j.cell.2020.11.038] |
1.9 TB | 3.19 Å | |
2021-05-14 | 3.9 Angstrom reconstruction of E.coli AcrB embedded in the liposome [5757 multi-frame micrographs composed of 32 frames each in MRCS format] | Yao X, Fan X, Yan N [Pubmed: 32680969] [DOI: 10.1073/pnas.2009385117] |
2.4 TB | 3.9 Å | |
2021-05-14 | TSC complex particles [1767 micrographs in MRC format] | Ramlaul K, Fu W, Li H, de Martin Garrido N, He L, Trivedi M, Cui W, Aylett CHS, Wu G [Pubmed: 33307091] [DOI: 10.1016/j.jmb.2020.166743] |
93.7 GB | 4.2 Å | |
2021-05-14 | Mixed capsids of MS2 virions [1809 micrographs in MRC format] | de Martin Garrido N, Crone MA, Ramlaul K, Simpson PA, Freemont PS, Aylett CHS [Pubmed: 31618483] [DOI: 10.1111/mmi.14406] |
113.1 GB | 3.9 Å | |
2021-05-10 | Yeast C, Ci, C*, and P complex spliceosomes [multiple data sets in TIFF and MRCS formats] | Wilkinson ME, Fica SM, Galej WP, Nagai K [Pubmed: 27459055] [DOI: 10.1038/nature19316] |
8.9 TB | 2.8 - 10.0 Å | |
2021-05-07 | The cryo-EM structure of vesivirus 2117 highlights functional variations in entry pathways for viruses in different clades of the vesivirus genus. [2000 multi-frame micrographs composed of 50 frames each in MRC format] | Sutherland H, Conley MJ, Emmott E, Streetley J, Goodfellow IG, Bhella D [Pubmed: 33853966] [DOI: 10.1128/JVI.00282-21] |
24.4 TB | 3.65 Å | |
2021-05-07 | Affinity-purified VgaA-LC in complex with 70S ribosomes from Staphylococcus aureus [3348 multi-frame micrographs composed of 20 frames each in TIFF format] | Crowe-McAuliffe CT, Murina V, Hauryliuk V, Wilson DN [Pubmed: 34117249] [DOI: 10.1038/s41467-021-23753-1] |
241.0 GB | 3.1 Å | |
2021-05-07 | Cryo-EM structures of human RNA Polymerase III [multiple data sets in TIFF and MRCS formats] | Girbig M, Misiaszek AD, Vorlaender MK, Mueller CW [Pubmed: 33558764] [DOI: 10.1038/s41594-020-00555-5] |
3.3 TB | 2.8 - 3.4 Å | |
2021-05-03 | Affinity-purified LsaA in complex with 70S ribosomes from Enterococcus faecalis [420 multi-frame micrographs composed of 40 frames each in TIFF format] | Crowe-McAuliffe CT, Murina V, Hauryliuk V, Wilson DN [Pubmed: 34117249] [DOI: 10.1038/s41467-021-23753-1] |
82.3 GB | 2.9 Å | |
2021-05-03 | Affinity-purified VgaL in complex with 70S ribosomes from Listeria monocytogenes [1834 multi-frame micrographs composed of 20 frames each in TIFF format] | Crowe-McAuliffe CT, Murina V, Hauryliuk V, Wilson DN [Pubmed: 34117249] [DOI: 10.1038/s41467-021-23753-1] |
146.0 GB | 2.9 Å | |
2021-04-30 | FIB-SEM of Gemmata obscuriglobus - a species of the Planctomycetes phylum [1 stitched maps in TIFF format] | Seeger C, Dyrhage K, Mahajan M, Odelgard A, Bergström Lind S, Andersson SGE [DOI: 10.3389/fmicb.2021.643045] |
1.6 GB | — | |
2021-04-30 | FIB-SEM of Tuwongella immobilis - a species of the Planctomycetes phylum [1 multi-frame micrographs composed of 464 frames each in TIFF format] | Andersson SGE, Odelgard A, Dyrhage K, Mahajan M, Seeger C [DOI: 10.3389/fmicb.2021.643045] |
6.7 GB | — | |
2021-04-23 | Cryo-electron tomography of HIV-1 GagdeltaMASP1T8I assemblies [5 tilt series in MRC format] | Ni T, Frosio T, Mendonça L, Sheng Y, Clare D, Himes BA, Zhang P [Pubmed: 35022621] [DOI: 10.1038/s41596-021-00648-5] |
25.6 GB | 4.5 Å | |
2021-04-22 | Human thyroglobulin [multiple data sets in TIFF format] | Coscia F, Taler-Vercic A, Chang VT, Sinn L, O'Reilly FJ, Izore T, Renko M, Berger I, Rappsilber J, Turk D, Lowe J [Pubmed: 32025030] [DOI: 10.1038/s41586-020-1995-4] |
1.7 TB | 3.6 Å | |
2021-04-15 | CryoEM structure of the CGRP receptor with bound CGRP peptide in a detergent micelle [5598 multi-frame micrographs composed of 71 frames each in TIFF format] | Josephs TM, Belousoff MJ, Liang YL, Piper SJ, Cao J, Garama DJ, Leach K, Gregory KJ, Christopoulos A, Hay DL, Danev R, Wootten D, Sexton PM [Pubmed: 33602864] [DOI: 10.1126/science.abf7258] |
1.6 TB | 3.49 Å | |
2021-04-14 | mouse MDA5-dsRNA filamemts in complex of 2mM ADP-AlF4 [multiple data sets in MRC format] | Yu Q, Qu K, Modis YE [Pubmed: 30449722] [DOI: 10.1016/j.molcel.2018.10.012] |
195.3 GB | 4.06 Å | |
2021-04-14 | Interleukin-10 signaling complex with IL-10RA and IL-10RB [9454 multi-frame micrographs composed of 50 frames each in TIFF format] | Saxton RA, Tsutsumi N, Gati C, Garcia KC [Pubmed: 33737461] [DOI: 10.1126/science.abc8433] |
5.4 TB | 3.5 Å | |
2021-04-14 | Micro X ray tomography of mesoscopic placental tissue [multiple data sets in TIFF and BIG DATA VIEWER HDF5 formats] | Tun W, Poologasundarampillai G, Bischof H, Nye G, King ONF, Basham M, Tokudome M, Lewis RM, Johnstone ED, Brownbill P, Darrow M, Chernyavsky IL | 75.3 GB | — | |
2021-04-14 | Micro X ray tomography of mesoscopic placental tissue [multiple data sets in TIFF and BIG DATA VIEWER HDF5 formats] | Tun WM, Poologasundarampillai G, Bischof H, Nye G, King ONF, Basham M, Tokudome Y, Lewis RM, Johnstone ED, Brownbill P, Darrow M, Chernyavsky IL [Pubmed: 34062108] [DOI: 10.1098/rsif.2021.0140] |
50.5 GB | — | |
2021-04-14 | Human NLRP1-DPP9 complex [multiple data sets in TIFF format] | Hollingsworth LR, Sharif H, Wu H [Pubmed: 33731932] [DOI: 10.1038/s41586-021-03350-4] |
2.3 TB | 3.6 Å | |
2021-04-14 | Human NLRP1-DPP9-VbP complex [multiple data sets in TIFF format] | Hollingsworth LR, Sharif H, Wu H [Pubmed: 33731932] [DOI: 10.1038/s41586-021-03350-4] |
1.2 TB | 2.9 Å | |
2021-04-14 | DNA origami signposts for identifying proteins on cell membranes by electron cryotomography [2 tilt series in MRC format] | Silvester E, Vollmer B, Pražák V, Vasishtan D, Machala EA, Whittle C, Black S, Bath J, Turberfield AJ, Grünewald K, Baker LA [Pubmed: 33606980] [DOI: 10.1016/j.cell.2021.01.033] |
38.8 MB | 36.44 Å |