Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2021-02-19 |  |
Single Particle Cryo-EM Reconstructions of NCP-CHD4 complexes [multiple data sets in TIFF and MRC formats] | Farnung L, Cramer P [Pubmed: 32543371] [DOI: 10.7554/eLife.56178] |
721.2 GB | 3.1 - 4.0 Å |
| 2021-02-19 |  |
Negative-stained transmission electron microscopy of the nucleosome remodelling and deacetylase complex purified from murine erythroleukemia cells. [1323 micrographs in MRC format] | Mackay JP, Landsberg MJ, Jackman MJ [Pubmed: 33264611] [DOI: 10.1016/j.celrep.2020.108450] |
82.7 GB | 14.0 Å |
| 2021-02-19 |  |
CryoEM structure of the LCD of hnRNPA2 amyloid-like fibrils [3937 multi-frame micrographs composed of 2 frames each in MRC format] | Lu J, Cao Q, Hughes MP, Sawaya MR, Boyer DR, Cascio D, Eisenberg DS [Pubmed: 32796831] [DOI: 10.1038/s41467-020-17905-y] |
1.2 TB | 3.1 Å |
| 2021-02-19 |  |
Apoferritin structure at 1.36 angstrom resolution determined from a 300 kV Titan Krios G3i electron microscope with Falcon4 detector [7734 multi-frame micrographs composed of 40 frames each in MRC format] | Zhang K, Pintilie GD, Li S, Schmid MF, Chiu W [Pubmed: 33139928] [DOI: 10.1038/s41422-020-00432-2] |
3.7 TB | 1.36 Å |
| 2021-02-17 |  |
Single particle cryo-EM dataset of Mus musculus mitochondrial complex I with ND6 P25L mutation [1492 multi-frame micrographs composed of 40 frames each in MRC format] | Yin Z, Bridges HR, Grba D, Hirst J [Pubmed: 33514727] [DOI: 10.1038/s41467-021-20942-w] |
3.1 TB | 3.82 Å |
| 2021-02-17 |  |
Raw cryo- and negative stain micrographs of a native extract from C. thermophilum used to reconstruct oxo acid dehydrogenase complexes [0 multi-frame micrographs composed of 0 frames each in MRC format] | Kastritis PLK [DOI: 10.1016/j.celrep.2021.108727] |
5.4 TB | 6.9 Å |
| 2021-02-12 |  |
Ultra-high voltage electron microscope tomography tilt series of neurite section [1 tilt series in MRC format] | Nishida T, Yoshimura R, Nishi R, Imoto Y, Endo Y [Pubmed: 32133640] [DOI: 10.1111/jmi.12885] |
120.3 MB | — |
| 2021-02-12 |  |
Ultra-high voltage electron microscope tomography tilt series of 0.7-μm-thick neurite section acquired at 6,000× magnification at an accelerating voltage of 1 MV [1 tilt series in MRC format] | Nishida T, Yoshimura R, Nishi R, Imoto Y, Endo Y [Pubmed: 32133640] [DOI: 10.1111/jmi.12885] |
120.3 MB | — |
| 2021-02-12 |  |
Ultra-high voltage electron microscope tomography tilt series of 0.7-μm-thick neurite section acquired at 15,000× magnification at an accelerating voltage of 1 MV [1 tilt series in MRC format] | Nishida T, Yoshimura R, Nishi R, Imoto Y, Endo Y [Pubmed: 32133640] [DOI: 10.1111/jmi.12885] |
120.3 MB | — |
| 2021-02-12 |  |
Negative-stained transmission electron microscopy of the nucleosome and deacetylase complex purified from murine erythroleukemia cells. [400 micrographs in MRC format] | Mackay JP, Landsberg MJ, Jackman MJ [Pubmed: 33264611] [DOI: 10.1016/j.celrep.2020.108450] |
25.0 GB | 14.0 Å |
| 2021-02-12 |  |
Negative-stained transmission electron microscopy of the MTA-HDAC-MBD core complex purified from EXPI cells [325 micrographs in MRC format] | Mackay JP, Landsberg MJ, Jackman MJ [Pubmed: 33264611] [DOI: 10.1016/j.celrep.2020.108450] |
20.3 GB | 29.0 Å |
| 2021-02-12 |  |
Atomic resolution structure of apoferritin from Titan Mono/BCorr microscope [43292 multi-frame micrographs composed of 40 frames each in MRC format] | Yip KM, Fischer N, Paknia E, Chari A, Stark H [Pubmed: 33087927] [DOI: 10.1038/s41586-020-2833-4] |
18.7 TB | 1.15 - 1.56 Å |
| 2021-02-12 |  |
Single particle cryo-EM dataset of Mus musculus mitochondrial complex I in the deactive state [1768 multi-frame micrographs composed of 30 frames each in MRCS format] | Yin Z, Bridges HR, Grba D, Hirst J, Blaza JN, Agip ANA [Pubmed: 29915388] [DOI: 10.1038/s41594-018-0073-1] |
2.7 TB | 3.17 - 3.9 Å |
| 2021-02-12 |  |
cryo-EM single particle dataset of a DNA nanostructure called "The Pointer-v2" [2381 multi-frame micrographs composed of 62 frames each in MRCS format] | Kube M, Kohler F, Feigl E, Nagel-Yüksel B, Willner EM, Funke JJ, Gerling T, Stömmer P, Honemann MN, Martin TG, Scheres SHW, Dietz H [Pubmed: 33277481] [DOI: 10.1038/s41467-020-20020-7] |
9.0 TB | 7.4 Å |
| 2021-02-12 |  |
Cryo Soft X-ray data for tetraspeck correlation [multiple data sets in MRC format] | Groen J, Pereiro E [Pubmed: 33990802] [DOI: 10.1038/s41596-021-00522-4] |
6.8 GB | — |
| 2021-02-10 |  |
Cryo EM strutcture of the full-length WzmWzt ABC transporter required for lipid-linked O antigen transport [5938 multi-frame micrographs composed of 31 frames each in TIFF format] | Zimmer J, Caffalette CA [Pubmed: 33443152] [DOI: 10.1073/pnas.2016144118] |
2.2 TB | 3.6 Å |
| 2021-02-10 |  |
Cryo-EM structures of Helicobacter pylori vacuolating cytotoxin A (VacA) oligomeric assemblies [10056 multi-frame micrographs composed of 30 frames each in MRC format] | Zhang K, Zhang H, Li S, Pintilie GD, Mou TC, Gao Y, Zhang Q, van den Bedem H, Schmid MF, Au SWN, Chiu W [Pubmed: 30894496] [DOI: 10.1073/pnas.1821959116] |
1.1 TB | 3.2 - 9.9 Å |
| 2021-02-10 |  |
Unaligned movies for FA core complex and symmetric complex [multiple data sets in TIFF format] | Passmore LA, Shakeel S [Pubmed: 31666700] [DOI: 10.1038/s41586-019-1703-4] |
13.2 TB | 4.2 Å |
| 2021-02-10 |  |
Unaligned movies for FANCD2-FANCI + DNA [5990 multi-frame micrographs composed of 50 frames each in TIFF format] | Shakeel S, Alcón P, Passmore LA [Pubmed: 32066963] [DOI: 10.1038/s41594-020-0380-1] |
1.7 TB | 4.1 Å |
| 2021-02-10 |  |
Unaligned movies for FANCD2 dimer [6218 multi-frame micrographs composed of 40 frames each in TIFF format] | Shakeel S, Alcón P, Passmore LA [Pubmed: 32066963] [DOI: 10.1038/s41594-020-0380-1] |
3.7 TB | 3.4 Å |
| 2021-02-10 |  |
Unaligned movies for ubFANCD2-FANCI + DNA [multiple data sets in TIFF format] | Shakeel S, Alcón P, Passmore LA [Pubmed: 32066963] [DOI: 10.1038/s41594-020-0380-1] |
4.5 TB | 3.8 Å |
| 2021-02-10 |  |
Cryo-EM structure of K+-bound hERG channel [1496 multi-frame micrographs composed of 50 frames each in TIFF format] | Asai T, Adachi N, Moriya T, Kawasaki M, Suzuki K, Senda T, Murata T [Pubmed: 33450182] [DOI: 10.1016/j.str.2020.12.007] |
1.4 TB | 3.9 Å |
| 2021-02-10 |  |
Cryo-EM structure of K+-bound hERG channel in the presence of astemizole [1865 multi-frame micrographs composed of 50 frames each in TIFF format] | Asai T, Adachi N, Moriya T, Kawasaki M, Suzuki K, Senda T, Murata T [Pubmed: 33450182] [DOI: 10.1016/j.str.2020.12.007] |
1.8 TB | 3.7 Å |
| 2021-02-05 |  |
Affinity-purified RqcH-ribosome-associated quality control complexes from Bacillus subtilis [7178 multi-frame micrographs composed of 20 frames each in TIFF format] | Crowe-McAuliffe CT, Takada H, Murina V, Atkinson GC, Wilson DN, Hauryliuk V [Pubmed: 33259810] [DOI: 10.1016/j.molcel.2020.11.002] |
514.6 GB | 2.6 - 3.5 Å |
| 2021-02-05 |  |
Affinity-purified RqcP/YabO-ribosome-associated quality control complexes from Bacillus subtilis [5416 multi-frame micrographs composed of 20 frames each in TIFF format] | Crowe-McAuliffe CT, Takada H, Murina V, Atkinson GC, Wilson DN, Hauryliuk V [Pubmed: 33259810] [DOI: 10.1016/j.molcel.2020.11.002] |
358.1 GB | 2.6 - 4.9 Å |
