Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2023-08-18 |  |
KpFtsZ single filament [6079 multi-frame micrographs composed of 60 frames each in TIFF format] | Fujita J, Amesaka H, Yoshizawa T, Hibino K, Kamimura N, Kuroda N, Konishi T, Kato Y, Hara M, Inoue T, Namba K, Tanaka SI, Matsumura H [Pubmed: 37429870] [DOI: 10.1038/s41467-023-39807-5] |
1.7 TB | 3.03 Å |
| 2023-08-18 |  |
KpFtsZ–Mb double helical tube [3096 multi-frame micrographs composed of 60 frames each in TIFF format] | Fujita J, Amesaka H, Yoshizawa T, Hibino K, Kamimura N, Kuroda N, Konishi T, Kato Y, Hara M, Inoue T, Namba K, Tanaka SI, Matsumura H [Pubmed: 37429870] [DOI: 10.1038/s41467-023-39807-5] |
794.4 GB | 2.67 Å |
| 2020-12-11 |  |
Krios G4 apoferritin test with Falcon 4 (no filter) EPU 1x1x4 [3540 multi-frame micrographs composed of 720 frames each in EER format] | Danev R [Pubmed: 33969878] [DOI: 10.1093/jmicro/dfab016] |
879.2 GB | 1.43 Å |
| 2020-12-07 |  |
Krios G4 apoferritin test with K3/(slit out) SerialEM BIS 1x1x4 [4184 multi-frame micrographs composed of 76 frames each in TIFF format] | Danev R [Pubmed: 33969878] [DOI: 10.1093/jmicro/dfab016] |
1.2 TB | 1.43 Å |
| 2020-12-02 |  |
Krios G4 apoferritin test with K3/BioQuantum SerialEM BIS 1x1x4 [3472 multi-frame micrographs composed of 76 frames each in TIFF format] | Danev R [Pubmed: 33969878] [DOI: 10.1093/jmicro/dfab016] |
966.0 GB | 1.35 Å |
| 2020-11-24 |  |
Krios G4 apoferritin test with K3/BioQuantum SerialEM BIS 3x3x1 [2391 multi-frame micrographs composed of 76 frames each in TIFF format] | Danev R [Pubmed: 33969878] [DOI: 10.1093/jmicro/dfab016] |
659.0 GB | 1.31 Å |
| 2021-04-14 |  |
Krios G4 apoferritin test with K3/BioQuantum SerialEM BIS 3x3x4 [2484 multi-frame micrographs composed of 76 frames each in TIFF format] | Danev R, Yanagisawa H, Kikkawa M [Pubmed: 33969878] [DOI: 10.1093/jmicro/dfab016] |
688.8 GB | 1.35 Å |
| 2019-06-21 |  |
LAT1-CD98hc bound to HBJ127 Fab and MEM-108 Fab [1869 multi-frame micrographs composed of 40 frames each in TIFF format] | Lee Y, Wiriyasermkul P, Jin C, Quan L, Ohgaki R, Okuda S, Kusakizako T, Nishizawa T, Oda K, Ishitani R, Yokoyama T, Nakane T, Shirouzu M, Endou H, Nagamori S, Kanai Y, Nureki O [Pubmed: 31160781] [DOI: 10.1038/s41594-019-0237-7] |
969.9 GB | 4.1 Å |
| 2019-07-25 |  |
LAT1-CD98hc bound to MEM-108 Fab [multiple data sets in TIFF and MRCS formats] | Lee Y, Wiriyasermkul P, Jin C, Quan L, Ohgaki R, Okuda S, Kusakizako T, Nishizawa T, Oda K, Ishitani R, Yokoyama T, Nakane T, Shirouzu M, Endou H, Nagamori S, Kanai Y, Nureki O [Pubmed: 31160781] [DOI: 10.1038/s41594-019-0237-7] |
4.1 TB | 3.31 Å |
| 2023-05-17 |  |
LPHN3 (ADGRL3) 7TM domain bound to tethered agonist in complex with G protein heterotrimer [8877 multi-frame micrographs composed of 63 frames each in TIFF format] | Barros-Alvarez X, Panova O, Skiniotis G [Pubmed: 35418682] [DOI: 10.1038/s41586-022-04575-7] |
5.3 TB | 2.9 Å |
| 2023-03-14 |  |
LRRC8A-BRIL(T48D):C Heteromer in GDN [multiple data sets in TIFF and MRCS formats] | Kern DM, Brohawn SG [Pubmed: 36928458] [DOI: 10.1038/s41594-023-00944-6] |
2.1 TB | 3.1 - 4.32 Å |
| 2023-04-12 |  |
LRRC8A-BRIL:C Heteromer in GDN [multiple data sets in TIFF and MRCS formats] | Kern DM, Brohawn SG [Pubmed: 36928458] [DOI: 10.1038/s41594-023-00944-6] |
8.9 TB | 2.95 - 4.16 Å |
| 2023-03-14 |  |
LRRC8A-BRIL:C Heteromer in lipid nanodiscs [multiple data sets in TIFF and MRCS formats] | Kern DM, Brohawn SG [Pubmed: 36928458] [DOI: 10.1038/s41594-023-00944-6] |
2.4 TB | 3.17 - 3.48 Å |
| 2019-04-12 |  |
LRRC8A-DCPIB in MSP1E3D1 nanodiscs [2482 multi-frame micrographs composed of 40 frames each in TIFF format] | Kern DM, Oh S, Hite RK, Brohawn SG [Pubmed: 30775971] [DOI: 10.7554/eLife.42636] |
973.9 GB | 3.21 Å |
| 2016-06-20 |  |
Lambda excision HJ intermediate [stack of 66033 particles in MRC format] | Laxmikanthan G, Xu C, Brilot AF, Warren D, Steele L, Seah N, Tong W, Grigorieff N, Landy A, Van Duyne G [Pubmed: 27223329] [DOI: 10.7554/elife.14313] |
4.0 GB | 11.0 Å |
| 2023-11-14 |  |
Ligand-free SpSLC9C1 in detergent [multiple data sets in TIFF format] | Kalienkova V, Peter MF, Rheinberger J, Paulino C [Pubmed: 37880361] [DOI: 10.1038/s41586-023-06629-w] |
2.1 TB | 3.05 - 3.3 Å |
| 2023-11-14 |  |
Ligand-free SpSLC9C1 in lipid nanodiscs [11299 multi-frame micrographs composed of 76 frames each in TIFF format] | Kalienkova V, Peter MF, Rheinberger J, Paulino C [Pubmed: 37880361] [DOI: 10.1038/s41586-023-06629-w] |
3.3 TB | 3.21 - 3.4 Å |
| 2023-02-22 |  |
Light and electron microscopy continuum-resolution imaging of 3D cell cultures [19 multi-frame micrographs composed of 1 frames each in MRC format] | DImprima EDI, Garcia Montero MGM, Gawrzak, SG, Ronchi PR, Zagoriy IZ, Schwab YS, Jechlinger JS, Mahamid JM | 72.9 GB | — |
| 2021-03-05 |  |
Lipid Droplets as Fiducials for SXT and SIM Correlation [700 tilt series in MRC format] | Okolo CA, Kounatidis I, Groen J, Nahas KL, Balint S, Fish T, Koronfel MA, López-Cortajarena A, Dobbie I, Pereiro E, Harkiolaki M | 4.8 GB | — |
| 2021-01-22 |  |
Lipid-stabilised asymmetric open state of the 5-HT3A serotonin receptor [multiple data sets in MRC format] | Zhang Y, Dijkman PM, Zou R, Zandl-Lang M, Sanchez RM, Eckhardt-Strelau L, Köfeler H, Vogel H, Yuan S, Kudryashev M [Pubmed: 33594077] [DOI: 10.1038/s41467-021-21016-7] |
6.4 TB | 2.8 - 3.2 Å |
| 2023-04-27 |  |
Lloviu cuevavirus nucleoprotein RNA complex [multiple data sets in TIFF format] | Hu S, Fujita-Fujiharu Y, Sugita Y, Wendt L, Muramoto Y, Nakano M, Hoenen T, Noda T [DOI: 10.1093/pnasnexus/pgad120] |
4.4 TB | 3.0356 Å |
| 2021-07-07 |  |
Locating Macromolecular Assemblies in Cells by 2D Template Matching with cisTEM [multiple data sets in MRC format] | Lucas BA, Himes BA, Xue L, Grant T, Mahamid J, Grigorieff N [Pubmed: 34114559] [DOI: 10.7554/eLife.68946] |
11.0 GB | 20.0 Å |
| 2021-11-15 |  |
Locating Macromolecular Assemblies in Cells by 2D Template Matching with cisTEM [multiple data sets in MRC format] | Lucas BA, Himes BA, Xue L, Grant T, Mahamid J, Grigorieff N [Pubmed: 33542511] [DOI: 10.1038/s41592-020-01054-7] |
67.8 GB | 3.4 Å |
| 2014-02-21 |  |
Low-contrast particle stack for HIV-1 Env gp160 precursor (MRC stack) [stack of 124478 particles in MRC format] | Mao Y, Wang L, Gu C, Herschhorn A, Desormeaux A, Finzi A, Xiang SH, Sodroski JG [Pubmed: 23757493] [DOI: 10.1073/pnas.1307382110] |
38.0 GB | 6.0 Å |
| 2014-02-21 |  |
Low-contrast particle stack for HIV-1 Env gp160 precursor (Spider stack) [stack of 670023 particles in SPIDER format] | Mao Y, Wang L, Gu C, Herschhorn A, Desormeaux A, Finzi A, Xiang SH, Sodroski JG [Pubmed: 23757493] [DOI: 10.1073/pnas.1307382110] |
164.2 GB | 6.0 Å |
