오사카 대학의 EMPIAR-PDBj 팀은, 아시아의 EM 연구자가 용량이 큰 EM 이미지를 EMPIAR 데이터베이스에 전송하는 것을 돕고 있습니다. 인터넷을 통하여 EBI (UK)에 직>접 데이터를 전송하는 대신, 이용자는 우편이나 택배를 통하여 하드 디스크를 오사카 대학으로 보내실 수 있습니다. 혹은 인터넷을 이용하여 오사카 대학의 서버로 전>송 하실 수 있습니다. 오사카 대학에 데이터 전송 서비스를 희망하시는 분은 데이터를 보내시기 전에 먼저 이메일 통하여 등록하시고 싶은 EM데이터에 관하여 상담하십시오.
Release date | Imageset | Title | Authors and references | Size | Resolution |
---|---|---|---|---|---|
2022-04-25 | CryoEM single particle dataset of alpha-latrocrustotoxin monomer [multiple data sets in TIFF format] | Gatsogiannis C, Chen M [Pubmed: 34845192] [DOI: 10.1038/s41467-021-26562-8] |
5.1 TB | 4.03 Å | |
2022-04-25 | Single particle cryo-EM dataset of Mus musculus mitochondrial complex I bound with an acetogenin inhibitor [1283 multi-frame micrographs composed of 50 frames each in MRC format] | Grba DN, Blaza JN, Bridges HR, Agip AA, Yin Z, Murai M, Miyoshi H, Hirst J [Pubmed: 35063503] [DOI: 10.1016/j.jbc.2022.101602] |
3.3 TB | 3.4 Å | |
2022-04-25 | Cryo-EM data used for the determination of LACV-L in transcription capped primer cleavage state [3270 multi-frame micrographs composed of 60 frames each in TIFF format] | Malet H, Arragain B, Durieux Trouilleton Q, Cusack S, Schoehn G [Pubmed: 35173159] [DOI: 10.1038/s41467-022-28428-z] |
934.6 GB | 3.9 Å | |
2022-04-25 | Cryo electron microscopy of in vitro recombinant SAA1.1 amyloid fibrils [multiple data sets in TIFF and JPEG formats] | Schmidt MS [Pubmed: 33579941] [DOI: 10.1038/s41467-021-21129-z] |
525.4 GB | 2.73 - 2.95 Å | |
2022-04-22 | Cryo-EM structure of human U2 snRNP after ATP-dependent remodeling [multiple data sets in TIFF and MRCS formats] | Tholen J, Galej WP, Weis F [Pubmed: 34822310] [DOI: 10.1126/science.abm4245] |
1.5 TB | 2.15 Å | |
2022-04-19 | Atomic structure of Lanreotide nanotubes revealed by cryo-EM [stack of 631121 particles in MRCS format] | Pieri L, Wang F, Bressanelli S, Egelman EH, Paternostre M [Pubmed: 35042822] [DOI: 10.1073/pnas.2120346119] |
362.5 GB | 2.46 Å | |
2022-04-19 | In situ architecture of the lipid transport protein VPS13C at ER-lysosomes membrane contacts [5 tilt series in MRC format] | Cai S [Pubmed: 35858323] [DOI: 10.1073/pnas.2203769119] |
29.5 GB | 47.0 Å | |
2022-04-19 | Cryo-EM micrographs of BMV TLS RNA [multiple data sets in MRC format] | Bonilla SL, Sherlock ME, MacFadden A, Kieft JS [Pubmed: 34793227] [DOI: 10.1126/science.abe8526] |
6.7 TB | 4.3 Å | |
2022-04-13 | Cryo-EM structure of RNA-induced tau fibrils reveals a small C-terminal core that may nucleate fibril formation [4729 multi-frame micrographs composed of 40 frames each in MRC format] | Abskharon R, Sawaya MR, Boyer DR, Cao Q, Nguyen BA, Cascio D, Eisenberg DS [Pubmed: 35377792] [DOI: 10.1073/pnas.2119952119] |
693.4 GB | 3.4 Å | |
2022-04-06 | CryoEM Structure of the, UND-PP bound, WaaL O-Antigen Ligase [2378 multi-frame micrographs composed of 50 frames each in MRC format] | Ashraf KU, Nygaard R, Vickery ON, Erramilli SK, Herrera CM, McConville TH, Petrou VI, Giacometti SI, Dufrisne MB, Nosol K, Zinkle AP, Graham CLB, Loukeris M, Kloss B, Skorupinska-Tudek K, Swiezewska E, Roper DI, Clarke OB, Uhlemann AC, Kossiakoff AA, Trent MS, Stansfeld PJ, Mancia F [Pubmed: 35388216] [DOI: 10.1038/s41586-022-04555-x] |
477.2 GB | 3.23 Å | |
2022-04-04 | Cryo-EM micrographs of GABA(A)Rs purified from cells expressing human full-length alpha4, beta3 and gamma2 subunits, in presence of GABA and nanobody Nb25 [14346 multi-frame micrographs composed of 48 frames each in TIFF format] | Sente A, Desai R, Naydenova K, Malinauskas T, Jounaidi Y, Miehling J, Zhou X, Masiulis S, Hardwick SW, Chirgadze DY, Miller KW, Aricescu AR [Pubmed: 35355020] [DOI: 10.1038/s41586-022-04517-3] |
3.8 TB | 3.0 - 3.1 Å | |
2022-04-04 | Cryo-EM micrographs of GABA(A)Rs purified from cells expressing human full-length alpha4, beta3 and delta subunits, in presence of THIP (gaboxadol), histamine and nanobody Nb25 [6437 multi-frame micrographs composed of 48 frames each in TIFF format] | Sente A, Desai R, Naydenova K, Malinauskas T, Jounaidi Y, Miehling J, Zhou X, Masiulis S, Hardwick SW, Chirgadze DY, Miller KW, Aricescu AR [Pubmed: 35355020] [DOI: 10.1038/s41586-022-04517-3] |
3.8 TB | 2.9 - 3.4 Å | |
2022-04-04 | Cryo-EM micrographs of GABA(A)Rs purified from cells expressing human full-length alpha4, beta3 and delta subunits, in presence of GABA, histamine, Ro15-4513 and nanobody Nb25 [10465 multi-frame micrographs composed of 48 frames each in TIFF format] | Sente A, Desai R, Naydenova K, Malinauskas T, Jounaidi Y, Miehling J, Zhou X, Masiulis S, Hardwick SW, Chirgadze DY, Miller KW, Aricescu AR [Pubmed: 35355020] [DOI: 10.1038/s41586-022-04517-3] |
2.8 TB | 2.9 - 3.0 Å | |
2022-04-04 | Cryo-EM micrographs of GABA(A)Rs purified from cells expressing human full-length alpha1, beta3 and gamma subunits, in presence of Ro15-4513 and megabody Mb38 [689 multi-frame micrographs composed of 65 frames each in MRC format] | Sente A, Desai R, Naydenova K, Malinauskas T, Jounaidi Y, Miehling J, Zhou X, Masiulis S, Hardwick SW, Chirgadze DY, Miller KW, Aricescu AR [Pubmed: 35355020] [DOI: 10.1038/s41586-022-04517-3] |
1.4 TB | 2.7 Å | |
2022-04-04 | Cryo-EM micrographs of GABA(A)Rs purified from cells expressing human full-length alpha4, beta3 and delta subunits, in presence of HEPES and nanobody Nb25 [18161 multi-frame micrographs composed of 32 frames each in TIFF format] | Sente A, Desai R, Naydenova K, Malinauskas T, Jounaidi Y, Miehling J, Zhou X, Masiulis S, Hardwick SW, Chirgadze DY, Miller KW, Aricescu AR [Pubmed: 35355020] [DOI: 10.1038/s41586-022-04517-3] |
4.1 TB | 2.5 - 2.9 Å | |
2022-04-04 | Cryo-EM micrographs of GABA(A)Rs purified from cells expressing human full-length alpha4, beta3 and delta subunits, in presence of GABA, histamine and nanobody Nb25 [11562 multi-frame micrographs composed of 48 frames each in TIFF format] | Sente A, Desai R, Naydenova K, Malinauskas T, Jounaidi Y, Miehling J, Zhou X, Masiulis S, Hardwick SW, Chirgadze DY, Miller KW, Aricescu AR [Pubmed: 35355020] [DOI: 10.1038/s41586-022-04517-3] |
3.0 TB | 3.0 - 3.1 Å | |
2022-04-01 | 2.3 A structure of the ATP-dependent chromatin remodeler Chd1 bound to the nucleosome in a nucleotide-free state [multiple data sets in TIFF, MRC and MRCS formats] | Nodelman IM, Das S, Faustino AM, Fried SD, Bowman GD, Armache JP [Pubmed: 35173352] [DOI: 10.1038/s41594-021-00719-x] |
4.7 TB | 2.3 - 2.9 Å | |
2022-03-29 | Oxytocin receptor (OTR) bound to oxytocin in complex with a heterotrimeric Gq protein [7728 multi-frame micrographs composed of 50 frames each in TIFF format] | Meyerowitz JG, Robertson MJ, Panova O, Skiniotis G [Pubmed: 35241813] [DOI: 10.1038/s41594-022-00728-4] |
4.1 TB | 2.9 Å | |
2022-03-28 | Single particle Cryo-EM data set for study the structural basis of Phosphatidylinositol 3-kinase type 2α (PI3KC2α) [multiple data sets in MRC format] | Lo WT, Zhang Y, Vadas O, Roske Y, Gulluni F, De Santis MC, Zagar AV, Stephanowitz H, Hirsch E, Liu F, Daumke O, Kudryashev M, Haucke V [Pubmed: 35256802] [DOI: 10.1038/s41594-022-00730-w] |
0.0 B | 4.4 Å | |
2022-03-28 | Cryo-EM structure of SARS-CoV-2 Main protease C145S in complex with N-terminal peptide [multiple data sets in MRCS and TIFF formats] | Godoy AS, Song Y, Noske GD, Oliva G | 3.3 TB | 3.5 Å | |
2022-03-28 | Representative data from Near-native state imaging by cryo-soft-X-ray tomography reveals remodelling of cytoplasmic vesicles and mitochondria during HSV-1 infection [14 reconstructed volumes in MRC format] | Nahas KLN, Connor VC, Scherer KM, Kaminski CF, Harkiolaki M, Crump CM, Graham SC [DOI: 10.1101/2021.10.11.463900] |
9.9 GB | — | |
2022-03-22 | High-resolution Cryo-EM of Fab-labeled human parechovirus 3 [6759 multi-frame micrographs composed of 16 frames each in MRCS format] | Domanska A, Flatt JW, Jukonen JJJ, Geraets JA, Butcher SJ [Pubmed: 30463974] [DOI: 10.1128/JVI.01597-18] |
1.5 TB | 2.8 Å | |
2022-03-21 | Structure of the GPCR dimer Ste2 bound to an antagonist [15751 multi-frame micrographs composed of 59 frames each in TIFF format] | Velazhahan V, Tate CG [Pubmed: 35296853] [DOI: 10.1038/s41586-022-04498-3] |
4.1 TB | 2.7 Å | |
2022-03-21 | Structure of the ligand-free GPCR dimer Ste2 [9369 multi-frame micrographs composed of 53 frames each in EER format] | Velazhahan V, Tate CG [Pubmed: 35296853] [DOI: 10.1038/s41586-022-04498-3] |
8.2 TB | 3.1 Å | |
2022-03-21 | Structure of the agonist-bound GPCR dimer Ste2 [6944 multi-frame micrographs composed of 50 frames each in MRC format] | Velazhahan V, Tate CG [Pubmed: 35296853] [DOI: 10.1038/s41586-022-04498-3] |
1.3 TB | 3.46 - 3.53 Å |