오사카 대학의 EMPIAR-PDBj 팀은, 아시아의 EM 연구자가 용량이 큰 EM 이미지를 EMPIAR 데이터베이스에 전송하는 것을 돕고 있습니다. 인터넷을 통하여 EBI (UK)에 직>접 데이터를 전송하는 대신, 이용자는 우편이나 택배를 통하여 하드 디스크를 오사카 대학으로 보내실 수 있습니다. 혹은 인터넷을 이용하여 오사카 대학의 서버로 전>송 하실 수 있습니다. 오사카 대학에 데이터 전송 서비스를 희망하시는 분은 데이터를 보내시기 전에 먼저 이메일 통하여 등록하시고 싶은 EM데이터에 관하여 상담하십시오.
Release date | Imageset | Title | Authors and references | Size | Resolution |
---|---|---|---|---|---|
2021-10-26 | The CryoEM Structure of Drosophila Flight Muscle Thick Filaments at 7Å Resolution [1510 multi-frame micrographs composed of 44 frames each in MRC format] | Daneshparvar N, Taylor DW, O'Leary TS, Rahmani H, Abbasiyeganeh F, Previs MJ, Taylor KA [Pubmed: 32718994] [DOI: 10.1101/2020.06.05.136580] |
8.7 TB | 7.0 - 8.0 Å | |
2021-10-26 | CryoEM structure of the outer membrane secretin channel pIV from the f1 filamentous bacteriophage [multiple data sets in TIFF format] | Conners R, Gold VAM [Pubmed: 34728631] [DOI: 10.1038/s41467-021-26610-3] |
7.0 TB | 2.7 Å | |
2021-10-26 | Cryo electron micrographs of Pol delta-DNA-PCNA giving rise to various PCNA tilt angles [multiple data sets in MRC format] | Lancey C, Tehseen M, Raducanu VS, Rashid F, Merino N, Ragan TJ, Savva CG, Zaher MS, Shirbini A, Blanco FJ, Hamdan SM, De Biasio A [Pubmed: 32111820] [DOI: 10.1038/s41467-020-14898-6] |
3.6 TB | 4.27 - 8.1 Å | |
2021-10-25 | Single particle cryo-EM dataset of Sars-CoV2 Rna dependent RNA polymerase [7043 multi-frame micrographs composed of 80 frames each in TIFF format] | Jochheim FA, Tegunov D, Hillen HS, Schmitzová J, Kokic G, Dienemann C, Cramer P [Pubmed: 34429502] [DOI: 10.1038/s42003-021-02529-9] |
2.7 TB | 5.5 Å | |
2021-10-25 | Cryo-EM structure of PilA-N/C from Geobacter sulfurreducens [7651 multi-frame micrographs composed of 27 frames each in TIFF format] | Gu Y, Srikanth V, Salazar-Morales AI, Jain R, O'Brien JP, Yi SM, Soni RK, Samatey FA, Yalcin SE, Malvankar NS [Pubmed: 34471289] [DOI: 10.1038/s41586-021-03857-w] |
1.5 TB | 3.8 Å | |
2021-10-25 | Cryo-EM micrographs of human ABCA1 [9819 multi-frame micrographs composed of 32 frames each in MRC format] | Qian H, Zhao X, Cao P, Lei J, Yan N, Gong X [Pubmed: 28602350] [DOI: 10.1016/j.cell.2017.05.020] |
16.3 TB | 4.1 Å | |
2021-10-25 | Cryo Electron Tomography of isolated S-layer patches from Ca.M.lanthanidiphila [multiple data sets in MRC format] | Gambelli L, Mesman R, Versantvoort W, Diebolder CA, Engel A, Evers W, Jetten MSM, Pabst M, Daum B, van Niftrik L [Pubmed: 34925275] [DOI: 10.3389/fmicb.2021.766527] |
46.3 GB | 21.0 Å | |
2021-10-22 | Single particle cryo-EM of human mitochondrial ribosomes from Pde12 KO cells [46109 multi-frame micrographs composed of 39 frames each in TIFF format] | Desai N, Yang H, Chandrasekaran V, Kazi R, Minczuk M, Ramakrishnan V [Pubmed: 33243891] [DOI: 10.1126/science.abc7782] |
45.7 TB | 4.4 Å | |
2021-10-22 | Cryo electron micrographs of Pol delta-PCNA-DNA-FEN1 sample [5073 multi-frame micrographs composed of 45 frames each in TIFF format] | Lancey C, Tehseen M, Raducanu VS, Rashid F, Merino N, Ragan TJ, Savva CG, Zaher MS, Shirbini A, Blanco FJ, Hamdan SM, De Biasio A [Pubmed: 32111820] [DOI: 10.1038/s41467-020-14898-6] |
1.6 TB | 3.08 - 4.05 Å | |
2021-10-19 | Apoferritin, TMV and T20S proteasome in nanofluidic channels [multiple data sets in TIFF format] | Huber ST, Sarajlic E, Huijink R, Weis F, Evers WH, Jakobi AJ [Pubmed: 35060902] [DOI: 10.7554/eLife.72629] |
308.3 GB | 3.0 - 5.4 Å | |
2021-10-19 | Multi-modal adaptor-clathrin contacts drive coated vesicle assembly [stack of 5720 particles in MRCS format] | Smith SM, Larocque G, Wood KM, Morris KL, Roseman AM, Sessions RB, Royle SJ, Smith CJ [Pubmed: 34487371] [DOI: 10.15252/embj.2021108795] |
1.9 GB | — | |
2021-10-19 | Molecular structure and conformation of stereocilia tip-links elucidated by cryo-electron tomography [multiple data sets in MRC format] | Elferich J, Clark S, Ge J, Goehring A, Matsui A, Gouaux E [Pubmed: 34964715] [DOI: 10.7554/eLife.74512] |
58.5 GB | — | |
2021-10-18 | Cryo electron tomography of FIB-milled lamella of human DLD-1 cells [3 tilt series in MRC format] | Schuller AP, Wojtynek M, Mankus D, Tatli M, Kronenberg-Tenga R, Regmi SG, Dip PV, Lytton-Jean AKR, Brignole EJ, Dasso M, Weis K, Medalia O, Schwartz TU [Pubmed: 34646014] [DOI: 10.1038/s41586-021-03985-3] |
8.0 GB | 33.0 - 39.0 Å | |
2021-10-18 | Cryo electron tomography of FIB-milled lamella of human DLD-1 cells [3 tilt series in MRC format] | Schuller AP, Wojtynek M, Mankus D, Tatli M, Kronenberg-Tenga R, Regmi SG, Dip PV, Lytton-Jean AKR, Brignole EJ, Dasso M, Weis K, Medalia O, Schwartz TU [Pubmed: 34646014] [DOI: 10.1038/s41586-021-03985-3] |
8.0 GB | 33.0 - 39.0 Å | |
2021-10-18 | E. coli MsbA in nanodiscs in complex with G247 [multiple data sets in MRC format] | Thélot FA, Liao M [Pubmed: 34554829] [DOI: 10.1126/science.abi9009] |
442.5 GB | 3.9 Å | |
2021-10-18 | Drug-free A. baumannii MsbA [6113 micrographs in MRC format] | Thélot FA, Liao M [Pubmed: 34554829] [DOI: 10.1126/science.abi9009] |
268.4 GB | 5.2 Å | |
2021-10-11 | Nucleolar maturation of the human small subunit processome [multiple data sets in TIFF and MRC formats] | Singh S, Vanden Broeck A, Klinge S [Pubmed: 34516797] [DOI: 10.1126/science.abj5338] EMD-23939 EMD-23936 EMD-24149 EMD-24150 EMD-24151 EMD-24152 EMD-24153 EMD-24154 EMD-24155 EMD-24156 EMD-24157 EMD-24158 EMD-24159 EMD-24160 EMD-24161 EMD-23940 EMD-23938 EMD-24162 EMD-24163 EMD-24164 EMD-24165 EMD-24166 EMD-24167 EMD-24168 EMD-24169 EMD-24170 EMD-24171 EMD-24172 EMD-24173 EMD-24174 EMD-24175 EMD-24176 |
74.6 TB | 2.6 - 6.37 Å | |
2021-10-05 | Cryo-EM structures of E. coli cytochrome bo3 in MSP Nanodiscs [3446 multi-frame micrographs composed of 50 frames each in TIFF format] | Vallese F [Pubmed: 34417297] [DOI: 10.1073/pnas.2106750118] |
851.4 GB | 2.19 Å | |
2021-10-01 | Cryo-EM structure of the SpCas9 delta4CE Ternary Complex [2570 multi-frame micrographs composed of 60 frames each in TIFF format] | Laughlin TG, Shams A, Savage DF [Pubmed: 34580310] [DOI: 10.1038/s41467-021-25992-8] |
1.5 TB | 6.2 Å | |
2021-10-01 | Single particle cryo EM Data of a human Akirin2 proteasome complex [multiple data sets in TIFF and MRC formats] | de Almeida M, Hinterndorfer M, Brunner H, Grishkovskaya I, Singh K, Schleiffer A, Jude J, Deswal S, Kalis R, Vunjak M, Lendl T, Imre R, Roitinger E, Neumann T, Kandolf S, Schutzbier M, Mechtler K, Versteeg GA, Haselbach D, Zuber J [Pubmed: 34711951] [DOI: 10.1038/s41586-021-04035-8] |
2.0 TB | 3.2 Å | |
2021-10-01 | Training data set for automated 2D class selection [18051 class averages in MRCS format] | Kimanius D, Dong L, Sharov G, Nakane T, Scheres SHW [Pubmed: 34783343] [DOI: 10.1042/bcj20210708] |
20.7 GB | — | |
2021-09-28 | A. baumannii MsbA in complex with TBT1 [6083 micrographs in MRC format] | Thélot FA, Liao M [Pubmed: 34554829] [DOI: 10.1126/science.abi9009] |
267.1 GB | 3.97 Å | |
2021-09-28 | Cryo-electron microscopy of the liposome-embedded type 1 ryanodine receptor [11187 multi-frame micrographs composed of 50 frames each in TIFF format] | Melville ZM, Kim K, Clarke OB, Marks AR [Pubmed: 34469755] [DOI: 10.1016/j.str.2021.08.001] |
2.4 TB | 3.36 - 3.98 Å | |
2021-09-24 | Oligo nucleosome fraction from metaphase chromosome in Xenopus egg extract (lot1) [multiple data sets in TIFF format] | Arimura YA, Funabiki HF [Pubmed: 34478647] [DOI: 10.1016/j.molcel.2021.08.010] |
1.3 TB | 3.5 - 5.5 Å | |
2021-09-24 | Oligo nucleosome fraction from interphase chromosome in Xenopus egg extract lot 1 [1364 multi-frame micrographs composed of 50 frames each in TIFF format] | Arimura YA, Funabiki HF [Pubmed: 34478647] [DOI: 10.1016/j.molcel.2021.08.010] |
634.3 GB | 3.38 - 8.07 Å |