Due to a storage failure, some data files are currently inaccessible (Markted: Incomplete dataset).
We are currently working to restore, but we are accepting priority requests.(email, inquiry).
We are restoring lost files from backups in the following order:
We apologize for the inconvenience and appreciate your understanding.
오사카 대학의 EMPIAR-PDBj 팀은, 아시아의 EM 연구자가 용량이 큰 EM 이미지를 EMPIAR 데이터베이스에 전송하는 것을 돕고 있습니다. 인터넷을 통하여 EBI (UK)에 직>접 데이터를 전송하는 대신, 이용자는 우편이나 택배를 통하여 하드 디스크를 오사카 대학으로 보내실 수 있습니다. 혹은 인터넷을 이용하여 오사카 대학의 서버로 전>송 하실 수 있습니다. 오사카 대학에 데이터 전송 서비스를 희망하시는 분은 데이터를 보내시기 전에 먼저 이메일 통하여 등록하시고 싶은 EM데이터에 관하여 상담하십시오.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2026-09-03 | Cryo-EM structure of a weak dimer of the C. elegans EGFR (LET-23) extracellular region with a domain IV loop deletion [multiple data sets in TIFF and MRC formats] | Zuo Y, Walker K, Han L, Ferguson KM [Pubmed: 42475585] [DOI: 10.1073/pnas.2602436123] |
5.6 TB | 4.0 Å | |
| 2026-09-03 | Cryo-electron tomography of functionally validated synapses in human induced neurons [multiple data sets in MRC format] | Sun RS | 164.1 GB | — | |
| 2026-09-01 | Cryo-EM of the C. elegans EGFR (LET-23) extracellular region bound to LIN-3 (dataset 1) [multiple data sets in TIFF and MRC formats] | Zuo Y, Han L, Ferguson KM [Pubmed: 42475585] [DOI: 10.1073/pnas.2602436123] |
3.2 TB | 2.37 Å | |
| 2026-09-01 | Cryo-EM of the C. elegans EGFR (LET-23) extracellular region bound to LIN-3 (dataset 2) [multiple data sets in TIFF and MRC formats] | Zuo Y, Han L, Ferguson KM [Pubmed: 42475585] [DOI: 10.1073/pnas.2602436123] |
2.0 TB | 2.81 Å | |
| 2026-09-01 | Single particle cryo-EM analysis of the C.albicans zincophore Pra1 in complex with zinc [multiple data sets in TIFF format] | Syrjanen JL [Pubmed: 41315346] [DOI: 10.1038/s41467-025-65782-0] |
2.0 TB | 2.5 Å | |
| 2026-08-27 | Single particle cryo-EM analysis of the C.albicans zincophore Pra1 in the apo-state [multiple data sets in TIFF format] | Syrjanen JL [Pubmed: 41315346] [DOI: 10.1038/s41467-025-65782-0] |
1.2 TB | 2.8 Å | |
| 2026-08-26 | ATP synthase from Thermus thermophilus [7150 multi-frame micrographs composed of 50 frames each in TIFF format] | Nakano A, Kishikawa JI, Yui N, Sugawara K, Kan Y, Gerle C, Shigematsu H, Mitsuoka K, Yokoyama K [Pubmed: 41105777] [DOI: 10.1126/sciadv.adx8771] |
1.4 TB | 2.7 Å | |
| 2026-08-26 | Experimentally-grounded benchmark datasets for cryoEM heterogeneous reconstruction methods with engineered Cas9 complexes, alternate microscope collection [multiple data sets in TIFF format] | Grassetti AV, Kinman LF, Davis JH [DOI: 10.64898/2026.05.04.721978] |
7.2 TB | — | |
| 2026-08-25 | Cryogenic Electron Micrographs of E. coli 50S ribosome LiCl core particle [multiple data sets in TIFF format] | Larsson DSD, Selmer M [Pubmed: 36358955] [DOI: 10.3390/biom12111605] |
7.9 TB | 2.84 - 9.4 Å | |
| 2026-08-25 | Visualization of membrane-stabilized SorCS2 cis interactions [multiple data sets in MRC format] | Beugelink JW, Janssen BJC [Pubmed: 42568954] [DOI: 10.1016/j.yjsbx.2026.100155] |
2.9 GB | 9.6 - 31.0 Å | |
| 2026-08-24 | Cryo-EM structure of the IS621 recombinase in complex with bridge RNA, left-half DNA, and right-half DNA [multiple data sets in TIFF format] | Hiraizumi M, Yamashita K, Nishimasu H [Pubmed: 42587149] [DOI: 10.1038/s41586-026-10903-y] |
3.2 TB | 2.5 - 2.6 Å | |
| 2026-08-18 | Single-particle cryo-EM datasets of H2A-nucleosome with scFv antibodies bound [5273 multi-frame micrographs composed of 40 frames each in EER format] | Tan DT | 4.8 TB | 3.9 Å | |
| 2026-08-17 | Single-particle cryo-EM of fusidic acid inhibition of ribosome recycling in Staphylococcus aureus [multiple data sets in TIFF format] | Gonzalez-Lopez A, Larsson DSD, Selmer M [DOI: 10.1093/nar/gkag778] |
8.8 TB | 2.18 - 3.06 Å | |
| 2026-08-17 | Structures of asymmetric immature particles of tick-borne encephalitis virus solved by SPA [11246 multi-frame micrographs composed of 40 frames each in TIFF format] | Fuzik T, Plevka P [Pubmed: 42397903] [DOI: 10.1126/sciadv.aee4765] |
1.8 TB | 3.57 - 10.96 Å | |
| 2026-08-17 | Structures of asymmetric immature particles of tick-borne encephalitis virus solved by STA [8201 multi-frame micrographs composed of 4 frames each in TIFF format] | Fuzik T, Plevka P [Pubmed: 42397903] [DOI: 10.1126/sciadv.aee4765] |
214.8 GB | 4.24 Å | |
| 2026-08-17 | Cryo-EM map of lysozyme [3503 multi-frame micrographs composed of 981 frames each in EER format] | Hicks CW | 1.7 TB | 4.61 Å | |
| 2026-08-17 | Outward-open structure of human glycine transporter 2 bound to allosteric inhibitor RPI-GLYT2-82 [16094 multi-frame micrographs composed of 60 frames each in EER format] | Cantwell Chater RP, Cioffi CL, Vandenberg RJ, Shahsavar A [Pubmed: 41332641] [DOI: 10.1101/2025.04.21.649698] |
8.2 TB | 2.79 Å | |
| 2026-08-13 | Cryo-EM structure of TrhO from B. subtilis complexed with tRNA Ala [10314 multi-frame micrographs composed of 60 frames each in EER format] | Shin K, Kim J [Pubmed: 41554887] [DOI: 10.1038/s41589-025-02129-2] |
10.8 TB | 3.04 Å | |
| 2026-08-07 | Bovine lactoferrin single particles in water, PDB-templated for uniform orientation. [4828 multi-frame micrographs composed of 64 frames each in TIFF format] | Wada M, Yamazaki K, Wada Y, Ohga K, Ishii Y, Nakagawa A, Yoshikawa H, Okuno S, Nojima T, Ochi H, Hirose M, Kato T, Katoh T [DOI: 10.1117/12.3119418] |
1.5 TB | 3.83 Å | |
| 2026-08-07 | Bovine lactoferrin particles in TBS for energy landscape analysis. [8443 multi-frame micrographs composed of 64 frames each in TIFF format] | Wada M, Yamazaki K, Wada Y, Ohga K, Ishii Y, Nakagawa A, Yoshikawa H, Okuno S, Nojima T, Ochi H, Hirose M, Kato T, Katoh T [DOI: 10.1117/12.3119418] |
2.4 TB | 7.97 Å | |
| 2026-08-07 | FIB-SEM image volumes of dinoflagellate cells from: Symbiodinium microadriaticum, Fugacium kawagutii, Breviolum minutum, and Crypthecodinium cohnii [multiple data sets in TIFF format] | Philipp L, Weber SC [DOI: 10.64898/2026.08.10.743404] |
271.3 GB | — | |
| 2026-08-07 | Antibody (1B2) Bound Rifamycin Synthetase Module 2 [10263 multi-frame micrographs composed of 50 frames each in MRC format] | Cogan DP | 968.5 GB | 2.94 Å | |
| 2026-08-06 | Iota toxin Ib D452A [4073 multi-frame micrographs composed of 52 frames each in TIFF format] | Yamada T, Nakanishi R, Sugita Y, Ninomiya Y, Noda T, Tsuge H | 933.7 GB | — | |
| 2026-08-06 | Outward-open structure of human glycine transporter 2 bound to allosteric inhibitor ORG25543 [12374 multi-frame micrographs composed of 60 frames each in EER format] | Cantwell Chater RP, Cioffi CL, Vandenberg RJ, Shahsavar A [Pubmed: 41332641] [DOI: 10.1101/2025.04.21.649698] |
6.4 TB | 2.49 Å | |
| 2026-08-05 | CryoEM movies of Mo-nitrogenase and FeSII from Azotobacter vinelandii in presence of oxygen [multiple data sets in EER and MRC formats] | Narehood SM, Cook BD, Srisantitham S, Eng VH, Shiau AA, McGuire KL, Britt RD, Herzik Jr MA, Tezcan FA [Pubmed: 39779844] [DOI: 10.1038/s41586-024-08311-1] |
4.9 TB | 2.27 - 3.94 Å |