Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
Our EMPIAR-PDBj will suspend the following operations from August 10, 2024 (Saturday) to August 18, 2024 (Sunday):
Web servers and data downloads will remain available during this period.
Additionally, please be aware that EMPIAR-EBI will also be closed for annotation operations from July 25, 2024 (Thursday) to August 18, 2024 (Sunday).
Thank you.
오사카 대학의 EMPIAR-PDBj 팀은, 아시아의 EM 연구자가 용량이 큰 EM 이미지를 EMPIAR 데이터베이스에 전송하는 것을 돕고 있습니다. 인터넷을 통하여 EBI (UK)에 직>접 데이터를 전송하는 대신, 이용자는 우편이나 택배를 통하여 하드 디스크를 오사카 대학으로 보내실 수 있습니다. 혹은 인터넷을 이용하여 오사카 대학의 서버로 전>송 하실 수 있습니다. 오사카 대학에 데이터 전송 서비스를 희망하시는 분은 데이터를 보내시기 전에 먼저 이메일 통하여 등록하시고 싶은 EM데이터에 관하여 상담하십시오.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2024-07-19 |  |
Single particle reconstruction of the human LINE-1 ORF2p without substrate (apo) [multiple data sets in MRC and TIFF formats] | van Eeuwen T, Zalevsky A, Rout MP, Taylor MS [Pubmed: 38096902] [DOI: 10.1038/s41586-023-06947-z] |
1.9 TB | 4.06 Å |
| 2024-07-19 |  |
Movies of two different filaments (AAP and threads) from Sulfolobus acidocaldarius [6279 multi-frame micrographs composed of 40 frames each in TIFF format] | Gaines M, Isupov MN, Sivabalasarma S, Haque RU, McLaren M, Mollat CL, Tripp P, Neuhaus A, Gold VAM, Albers SV, Daum B [Pubmed: 38877033] [DOI: 10.1038/s41467-024-45831-w] |
5.6 TB | 3.22 - 3.46 Å |
| 2024-07-19 |  |
Transporter associated with antigen processing (TAP) bound to the 9-mer peptide RRYQKSTEL [7933 multi-frame micrographs composed of 50 frames each in TIFF format] | Lee J, Oldham ML, Manon V, Chen J [DOI: 10.1101/2023.06.16.545308] |
4.3 TB | 3.5 Å |
| 2024-07-19 |  |
Cryo-ET dataset of purified SARS-CoV-2 double membrane vesicles formed by nsp3-4 [4635 tilt series in MRC format] | Huang YX, Ni T | 10.3 TB | — |
| 2024-07-19 |  |
ACE2 on GSAMs [2448 multi-frame micrographs composed of 32 frames each in MRC format] | Liu N, Xu J, Wang HW | 613.1 GB | 3.9 Å |
| 2024-07-19 |  |
Particle stacks from heart-derived AL amyloid (AL59) cryo-EM data [multiple data sets in MRCS format] | Schulte T, Speranzini V, Chaves-Sanjuan A, Milazzo M, Ricagno S | 130.1 GB | 3.6 Å |
| 2024-07-18 |  |
Rhodobacter microvirus Ebor attached to B10 host cell, single particle data [2750 multi-frame micrographs composed of 25 frames each in TIFF format] | Bardy P, MacDonald CIW, Kirchberger PC, Jenkins HT, Botka T, Byrom L, Alim NTB, Traore DAK, Konig HC, Nicholas TR, Chechik M, Hart SJ, Turkenburg JP, Blaza JN, Beatty JT, Fogg PCM, Antson AA [Pubmed: 38915634] [DOI: 10.1101/2024.06.11.598214] |
498.5 GB | 7.84 Å |
| 2024-07-16 |  |
Cryo electron tomography of chromatin condensed by PRC1-CBX8 [multiple data sets in MRC format] | Uckelmann M, Levina V, Taveneau C, de Marco A, Davidovich C | 8.7 GB | — |
| 2024-07-16 |  |
Cryo-EM structure of human pseudouridine synthase 3 and tRNA-Gln [8792 micrographs in TIFF format] | Lin T.-Y., Glatt S. [DOI: 10.1016/j.molcel.2024.06.013] |
3.4 TB | 3.1 Å |
| 2024-07-16 |  |
cryo-EM structure of human tRNA(GlyCCC) [6016 micrographs in MRC format] | Biela AP, Glatt S | 528.2 GB | 5.23 Å |
| 2024-07-16 |  |
cryo-EM structure of human tRNA(GluUUC) - PUS4 and PUS7 modified [6112 micrographs in MRC format] | Biela AP, Glatt S | 536.7 GB | 4.95 Å |
| 2024-07-16 |  |
Single-Particle Cryo-EM of DPS at Various Tilts [multiple data sets in TIFF, MRC and MRCS formats] | Aiyer S, Baldwin PR, Tan SM, Shan Z, Oh J, Mehrani A, Bowman ME, Louie G, Passos DO, Đorđević-Marquardt S, Mietzsch M, Hull JA, Hoshika S, Barad BA, Grotjahn DA, McKenna R, Agbandje-McKenna M, Benner SA, Noel JAP, Wang D, Tan YZ, Lyumkis D [Pubmed: 38195598] [DOI: 10.1038/s41467-023-44555-7] |
114.7 GB | 2.6 - 3.2 Å |
| 2024-07-16 |  |
CryoEM SPA dataset of tetrameric forms of the serotonin-gated 5-HT3A receptor apo state [7932 multi-frame micrographs composed of 40 frames each in TIFF format] | Introini B | 4.2 TB | 3.8 - 3.9 Å |
| 2024-07-16 |  |
Cryo electron micrographs of retinal-free Proteoopsin bound to decanoate [20910 multi-frame micrographs composed of 40 frames each in TIFF format] | Hirschi S, Lemmin T, Fotiadis D | 3.0 TB | 2.97 Å |
| 2024-07-16 |  |
Cryo-EM of Caulobacter crescentus FljK flagellar filament [8813 multi-frame micrographs composed of 55 frames each in TIFF format] | Sanchez JC, Montemayor EJ, Ploscariu NT, Parrell D, Baumgardt JK, Yang JE, Sibert B, Cai K, Wright ER [Pubmed: 37503001] [DOI: 10.1101/2023.07.10.548443] |
2.0 TB | 2.71 Å |
| 2024-07-16 |  |
In situ cryoET of beta-amyloid and tau in post-mortem Alzheimer's disease brain [61 tilt series in MRC format] | Jenkins J [Pubmed: 38987603] [DOI: 10.1038/s41586-024-07680-x] |
149.4 GB | 8.7 - 33.0 Å |
| 2024-07-16 |  |
In situ cryoET of beta-amyloid and tau in post-mortem Alzheimer's disease brain [61 reconstructed volumes in MRC format] | Jenkins J [Pubmed: 38987603] [DOI: 10.1038/s41586-024-07680-x] |
127.0 GB | 8.7 - 33.0 Å |
| 2024-07-16 |  |
In situ cryoET of beta-amyloid and tau in post-mortem Alzheimer's disease brain [61 reconstructed volumes in MRC format] | Jenkins J [Pubmed: 38987603] [DOI: 10.1038/s41586-024-07680-x] |
167.0 GB | 8.7 - 33.0 Å |
| 2024-07-16 |  |
In situ cryoET of beta-amyloid and tau in post-mortem Alzheimer's disease brain [61 reconstructed volumes in MRC format] | Jenkins J [Pubmed: 38987603] [DOI: 10.1038/s41586-024-07680-x] |
140.6 GB | 8.7 - 33.0 Å |
| 2024-07-16 |  |
Particle stack from SARS-CoV-2 (wuhan variant) Spike protein in complex with the single chain fragment scFv41N single particle cryo-EM data [stack of 4991 particles in MRCS format] | Chaves-Sanjuan A, Berlinguer M, Bolognesi M | 712.4 GB | 3.8 - 4.0 Å |
| 2024-07-16 |  |
Cryo-EM of Caulobacter crescentus FljM flagellar filament [9780 multi-frame micrographs composed of 45 frames each in TIFF format] | Sanchez JC, Montemayor EJ, Ploscariu NT, Parrell D, Baumgardt JK, Yang JE, Sibert B, Cai K, Wright ER [Pubmed: 37503001] [DOI: 10.1101/2023.07.10.548443] |
1.9 TB | 2.11 Å |
| 2024-07-16 |  |
In vitro-induced genome-releasing intermediate of Rhodobacter microvirus Ebor computed with C5 symmetry [2810 multi-frame micrographs composed of 2765 frames each in EER format] | Bardy P, MacDonald CIW, Kirchberger PC, Jenkins HT, Botka T, Byrom L, Alim NTB, Traore DAK, Konig HC, Nicholas TR, Chechik M, Hart SJ, Turkenburg JP, Blaza JN, Beatty JT, Fogg PCM, Antson AA [Pubmed: 38915634] [DOI: 10.1101/2024.06.11.598214] |
4.3 TB | 25.0 Å |
| 2024-07-14 |  |
CryoEM micrographs of a group II RNP in the post-ligation state [multiple data sets in TIFF format] | Xu L, Liu T, Chung K [Pubmed: 37993708] [DOI: 10.1038/s41586-023-06746-6] |
5.9 TB | 3.0 Å |
| 2024-07-14 |  |
Transporter associated with antigen processing (TAP) bound to the 8-mer peptide RRYQSTEL [16306 multi-frame micrographs composed of 30 frames each in TIFF format] | Lee J, Oldham ML, Manon V, Chen J [DOI: 10.1101/2023.06.16.545308] |
5.6 TB | 3.8 Å |
| 2024-07-12 |  |
UFM1 ribosome E3 ligase complex bound to the 60S ribosomal subunit [multiple data sets in EER and MRC formats] | Makhlouf L [Pubmed: 38383789] [DOI: 10.1038/s41586-024-07093-w] |
22.6 TB | 2.2 - 3.2 Å |
