Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
오사카 대학의 EMPIAR-PDBj 팀은, 아시아의 EM 연구자가 용량이 큰 EM 이미지를 EMPIAR 데이터베이스에 전송하는 것을 돕고 있습니다. 인터넷을 통하여 EBI (UK)에 직>접 데이터를 전송하는 대신, 이용자는 우편이나 택배를 통하여 하드 디스크를 오사카 대학으로 보내실 수 있습니다. 혹은 인터넷을 이용하여 오사카 대학의 서버로 전>송 하실 수 있습니다. 오사카 대학에 데이터 전송 서비스를 희망하시는 분은 데이터를 보내시기 전에 먼저 이메일 통하여 등록하시고 싶은 EM데이터에 관하여 상담하십시오.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2025-02-03 |  |
Cryo-EM structures of human vitamin C transporter SVCT1 [multiple data sets in TIFF format] | Kobayashi TA, Shimada H, Sano FK, Itoh Y, Enoki S, Okada Y, Kusakizako T, Nureki O [Pubmed: 38956111] [DOI: 10.1038/s41467-024-49899-2] |
2.9 TB | 2.49 - 3.5 Å |
| 2025-02-03 |  |
Micrographs for EMD-45727, EMD-45667, EMD-45669, and EMD-45670: Structure of DosP-FLAG-R97A with c-di-GMP [9450 multi-frame micrographs composed of 55 frames each in EER format] | Kober DL, Kumar P [Pubmed: 39511182] [DOI: 10.1038/s41467-024-53942-7] |
4.3 TB | 3.1 Å |
| 2025-02-03 |  |
Cryo-EM images of B. megaterium gas vesicles in thin vitreous monolayers [4352 multi-frame micrographs composed of 60 frames each in TIFF format] | Huber ST, Jakobi AJ [Pubmed: 36868215] [DOI: 10.1016/j.cell.2023.01.041] |
2.3 TB | 3.2 Å |
| 2025-02-03 |  |
E.coli DNA gyrase in complex with 217 bp substrate DNA (chirally wrapped state) [8508 multi-frame micrographs composed of 40 frames each in TIFF format] | Michalczyk E., Pakosz-Stepien Z, Liston J., Gittins O., Liston J.D., Pabis M., Heddle J.G., Ghilarov D. | 3.4 TB | 2.32 Å |
| 2025-02-03 |  |
Cryo-electron tomography of Mycobacterium smegmatis infected with bacteriophage Bxb1 [35 tilt series in MRC format] | Freeman K.G., Mondal S, Hatfull G.F., Park D | 954.4 GB | 11.65 Å |
| 2025-02-03 |  |
Class Ia ribonucleotide reductase with mechanism-based inhibitor N3CDP [6007 multi-frame micrographs composed of 30 frames each in TIFF format] | Westmoreland DE, Drennan CL [Pubmed: 39475643] [DOI: 10.1073/pnas.2417157121] |
1.9 TB | 2.6 Å |
| 2025-02-03 |  |
E.coli DNA gyrase in complex with cleaved 217 bp substrate DNA (chirally wrapped state) and moxifloxacin [8508 multi-frame micrographs composed of 40 frames each in TIFF format] | Michalczyk E., Pakosz-Stepien Z, Liston J., Gittins O., Liston J.D., Pabis M., Heddle J.G., Ghilarov D. [Pubmed: 39589884] [DOI: 10.1073/pnas.2407398121] |
1.7 TB | 2.6 Å |
| 2025-02-03 |  |
ShCas12k in complex with a sgRNA and a dsDNA target [multiple data sets in TIFF and MRC formats] | Schmitz M, Querques I, Oberli S, Chanez C, Jinek M [Pubmed: 34759315] [DOI: 10.1038/s41586-021-04030-z] |
1.7 TB | 3.04 Å |
| 2025-02-03 |  |
Cryo-electron microscopy of mycobacteriophage Bxb1 particles [1301 multi-frame micrographs composed of 48 frames each in MRC format] | Freeman KF, Huet A, Conway JF, Hatfull GF | 964.3 GB | 3.0 Å |
| 2025-02-03 |  |
Single particle reconstruction of human apo TRPM8 channel in a closed state [multiple data sets in TIFF and MRCS formats] | Palchevskyi S, Czarnocki-Cieciura M, Vistoli G, Gervasoni S, Nowak E, Beccari AR, Nowotny M, Talarico C [Pubmed: 37857704] [DOI: 10.1038/s42003-023-05425-6] |
3.4 TB | 2.65 - 3.2 Å |
| 2025-02-03 |  |
Single particle reconstruction of E. coli TnsB in complex with right end fragment of Tn7 transposon [multiple data sets in TIFF and MRCS formats] | Kaczmarska Z, Czarnocki-Cieciura M, Rawski M, Nowotny M [Pubmed: 35654042] [DOI: 10.1016/j.molcel.2022.05.005] |
3.7 TB | 2.68 - 3.79 Å |
| 2025-02-03 |  |
Cryo electron micrographs of Coxsackievirus A9 bound with CL213 [12618 multi-frame micrographs composed of 40 frames each in TIFF format] | Plavec Z, Mitchell C, Buckner C, Butcher SJ [Pubmed: 39292620] [DOI: 10.1021/acs.jmedchem.4c00701] |
4.9 TB | 2.5 Å |
| 2025-01-30 |  |
Electron tomography of endosymbiotic bacteria inside a bacteriocyte of the cereal weevil Sitophilus oryzae [120 reconstructed volumes in MRC format] | Santarella-Mellwig RSM, Balmand SB, Schwab YS, Zaidman-Remy AZR | 1.0 GB | — |
| 2025-01-29 |  |
Cryo-ET tilt series of FIB-milled wild-type mouse embryonic stem cells [161 tilt series in MRC format] | Taniguchi R, Orniacki C, Kreysing JP, Zila V, Zimmerli CE, Böhm S, Turoňová B, Kräusslich H-G, Doye V, Beck M | 401.2 GB | 28.5 - 30.4 Å |
| 2025-01-29 |  |
Cryo-ET tilt series of FIB-milled Nup133-deficient mouse embryonic stem cells [164 tilt series in MRC format] | Taniguchi R, Orniacki C, Kreysing JP, Zila V, Zimmerli CE, Böhm S, Turoňová B, Kräusslich H-G, Doye V, Beck M | 419.9 GB | 30.1 - 33.4 Å |
| 2025-01-29 |  |
Cryo-ET tilt series of FIB-milled wild-type mouse neural progenitor cells [96 tilt series in MRC format] | Taniguchi R, Orniacki C, Kreysing JP, Zila V, Zimmerli CE, Böhm S, Turoňová B, Kräusslich H-G, Doye V, Beck M | 239.8 GB | 30.7 - 31.8 Å |
| 2025-01-29 |  |
Cryo-ET tilt series of FIB-milled Nup133-deficient mouse neural progenitor cells [144 tilt series in MRC format] | Taniguchi R, Orniacki C, Kreysing JP, Zila V, Zimmerli CE, Böhm S, Turoňová B, Kräusslich H-G, Doye V, Beck M | 360.0 GB | 30.2 - 34.2 Å |
| 2025-01-29 |  |
Single particle reconstruction of LGTV with prME from TBEV [32123 multi-frame micrographs composed of 1314 frames each in EER format] | Rosendal E, Bisikalo K, Willekens SM, Lindgren M, Holoubek J, Svoboda P, Lappalainen A, Könighofer E, Mirgorodskaya E, Nordén R, Morini F, Rosenbaum W, Růžek D, Ahlgren U, Anastasina M, Merits A, Butcher SJ, Nilsson E, Överby AK [DOI: 10.1101/2024.10.16.618642] |
16.8 TB | 3.22 Å |
| 2025-01-29 |  |
Volume electron microscopy of APEX2-DAB labeled thalamocortical projections in visual cortex L4 [4 reconstructed volumes in TIFF format] | Bosworth AP, Weiser Novak S, Manor U, Allen NJ [DOI: 10.1101/2023.03.02.529949] |
199.8 GB | — |
| 2025-01-28 |  |
Scytonema hofmannii TnsC bound to AMPPNP and DNA [multiple data sets in TIFF and DM4 formats] | Querques I, Schmitz M, Oberli S, Chanez C, Jinek M [Pubmed: 34759315] [DOI: 10.1038/s41586-021-04030-z] |
1.3 TB | 3.57 Å |
| 2025-01-28 |  |
Cryo electron micrographs of disease resistance protein NRC2 from Nicotiana benthamiana [14049 multi-frame micrographs composed of 50 frames each in TIFF format] | Webster MW, Madhuprakash J, Kamoun S [DOI: 10.1101/2024.06.18.599586] |
2.7 TB | 2.9 Å |
| 2025-01-28 |  |
Cryo-EM structure of apo human SLC19A3 in outward-open state [5859 multi-frame micrographs composed of 45 frames each in TIFF format] | Gabriel FG [Pubmed: 39358356] [DOI: 10.1038/s41467-024-52872-8] |
2.5 TB | 3.09 Å |
| 2025-01-27 |  |
Movies of cagT∆ mutant Cag T4SS from Helicobacter pylori [3443 multi-frame micrographs composed of 34 frames each in TIFF format] | Roberts JR [Pubmed: 38631913] [DOI: 10.26508/lsa.202302560] |
741.3 GB | 8.0 Å |
| 2025-01-24 |  |
Cryo-ET of Dictyostelium discoideum in distilled H2O (hypoosmotic stress) [59 tilt series in MRC format] | Hoffmann PC, Beck M [Pubmed: 39729993] [DOI: 10.1016/j.molcel.2024.11.038] |
241.1 GB | 37.0 Å |
| 2025-01-24 |  |
E. coli clamp loader with primer-template DNA and a closed clamp [7201 multi-frame micrographs composed of 60 frames each in MRC format] | Xu ZQ, Jergic S, Dixon NE, Lo ATY, Pradhan AC, Brown HJ, Bouwer JC, Ghodke H, Lewis PJ, Tolun G, Oakley AJ [Pubmed: 39333521] [DOI: 10.1038/s41467-024-52623-9] |
1.0 TB | 2.6 Å |
