Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
Due to a storage failure, some datasets are currently inaccessible or incomplete (marked as Incomplete dataset).
We are pleased to report that the following entries have been restored:
EMPIAR-10577 (New)We are still accepting requests for datasets you would like us to download first (email, inquiry).
We apologize for the inconvenience and appreciate your understanding.
EMPIAR-PDBj services will be suspended during the following period for a legally required inspection of electrical equipment.
During this period, the website and data downloads from EMPIAR-PDBj will be unavailable.
Please use EMPIAR-EBI instead.
We apologize for any inconvenience.
오사카 대학의 EMPIAR-PDBj 팀은, 아시아의 EM 연구자가 용량이 큰 EM 이미지를 EMPIAR 데이터베이스에 전송하는 것을 돕고 있습니다. 인터넷을 통하여 EBI (UK)에 직>접 데이터를 전송하는 대신, 이용자는 우편이나 택배를 통하여 하드 디스크를 오사카 대학으로 보내실 수 있습니다. 혹은 인터넷을 이용하여 오사카 대학의 서버로 전>송 하실 수 있습니다. 오사카 대학에 데이터 전송 서비스를 희망하시는 분은 데이터를 보내시기 전에 먼저 이메일 통하여 등록하시고 싶은 EM데이터에 관하여 상담하십시오.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2026-10-02 |  |
GDH in complex with compound G1, processed with cryoPARES [stack of 277213 particles in MRCS format] | Sanchez-Garcia R, Berndt A, Reeks J, Williams PA, Poelking C, Deane CM, Saur M [DOI: 10.1101/2025.03.04.641536] |
88.0 GB | 2.9 Å |
| 2026-10-02 |  |
GDH in complex with compound G2, processed with cryoPARES [stack of 182538 particles in MRCS format] | Sanchez-Garcia R, Berndt A, Apelbaum A, Reeks J, Williams PA, Poelking C, Deane CM, Saur M [DOI: 10.1101/2025.03.04.641536] |
43.3 GB | 3.0 Å |
| 2026-10-02 |  |
GDH in complex with ADP, processed with cryoPARES [stack of 409693 particles in MRC format] | Sanchez-Garcia R, Berndt A, Apelbaum A, Reeks J, Williams PA, Poelking C, Deane CM, Saur M [DOI: 10.1101/2025.03.04.641536] |
70.9 GB | 3.6 Å |
| 2026-10-02 |  |
CARD1 ectodomain [40 multi-frame micrographs composed of 1100 frames each in TIFF format] | Fukuda Y, Ishihama N, Laohavisit A [Pubmed: 42151134] [DOI: 10.1038/s41467-026-72573-8] |
207.5 GB | 3.26 Å |
| 2026-10-02 |  |
JMV449-NTSR1-Gq nucleotide free [multiple data sets in TIFF format] | Kobayashi K, Kawakami K, Matsui TE, Fukuda M, Yamashita K, Kobilka BK, Kato HE [Pubmed: 41813902] [DOI: 10.1038/s41586-026-10228-w] |
2.5 TB | 2.24 Å |
| 2026-10-02 |  |
JMV449-NTSR1-Gi in 8 seconds following the GTP addition [12138 multi-frame micrographs composed of 48 frames each in TIFF format] | Kobayashi K, Kawakami K, Matsui TE, Fukuda M, Yamashita K, Kobilka BK, Kato HE [Pubmed: 41813902] [DOI: 10.1038/s41586-026-10228-w] |
2.7 TB | 3.01 - 3.38 Å |
| 2026-10-02 |  |
P-glycoprotein in complex with UIC2 Fab and triple elacridar molecules in LMNG detergent [multiple data sets in TIFF format] | Hamaguchi-Suzuki N, Adachi N, Moriya T, Yasuda S, Kawasaki M, Suzuki K, Ogasawara S, Anzai N, Senda T, Murata T [Pubmed: 38579618] [DOI: 10.1016/j.bbrc.2024.149855] |
2.1 TB | 2.49 - 2.54 Å |
| 2026-10-02 |  |
Cryo-electron tomography of mitotic human cells (RPE1) [234 reconstructed volumes in MRC format] | Conway W, Bobe D, Fabig G, Zimyanin V, de Marco A, Redemann S [Pubmed: 41648357] [DOI: 10.64898/2026.01.16.699769] |
193.4 GB | — |
| 2026-10-02 |  |
4 nm isotropic FIB-SEM volume of a *Planococcus citri* bacteriocyte containing nested endosymbionts, *Tremblaya princeps* and *Moranella endobia* [1 reconstructed volumes in MRC format] | Leprich DJL, Aaron JA, Hughes EH, Ladinsky MSL, Bjorkman PJB, McCutcheon JPM | 1.1 TB | — |
| 2026-10-01 |  |
tolvaptan-bound V2R-ARK1 [9571 multi-frame micrographs composed of 48 frames each in TIFF format] | Kojima A, Kawakami K, Kobayashi K, Matsui TE, Fukuda M, Kato HE [DOI: 10.64898/2026.04.02.716066] |
2.0 TB | 2.98 Å |
| 2026-10-01 |  |
Ki16425-bound LPA2-ARK1 [multiple data sets in TIFF format] | Kojima A, Kawakami K, Kobayashi K, Matsui TE, Uemoto K, Fukuda M, Kato HE [DOI: 10.64898/2026.04.02.716066] |
2.2 TB | 2.99 Å |
| 2026-10-01 |  |
Target analog-bound type III-B Cmr complex of Archaeoglobus fulgidus [2559 multi-frame micrographs composed of 49 frames each in MRCS format] | Ishihara K, Kitagawa S, Adachi N, Akutsu M, Senda T, Inanaga H, Numata T [Pubmed: 41242302] [DOI: 10.1016/j.bbrc.2025.152978] |
1.8 TB | 3.4 Å |
| 2026-09-29 |  |
Single-particle cryo-EM movies of the MAP2K MEK1 in complex with its substrate MAPK ERK2 [88517 multi-frame micrographs composed of 58 frames each in TIFF format] | von Velsen J, Juyoux P, Bowler MW [Pubmed: 41648251] [DOI: 10.64898/2026.01.19.700303] |
7.9 TB | 2.9 - 3.6 Å |
| 2026-09-24 |  |
Viral chemokine receptor US28 bound to engineered fractalkine and human Gq [11773 multi-frame micrographs composed of 50 frames each in TIFF format] | Tsutsumi N [DOI: 10.1038/s41467-026-78122-7] |
5.4 TB | 2.58 - 2.89 Å |
| 2026-09-24 |  |
Cryo-EM of Eco RNAP his-elemental paused elongation complex [26972 multi-frame micrographs composed of 40 frames each in TIFF format] | Dhingra Y., Landick R., Campbell E.A., Darst S.A. [Pubmed: 42378287] [DOI: 10.1073/pnas.2609228123] |
4.3 TB | 2.8 - 4.0 Å |
| 2026-09-24 |  |
Cryo-EM of Eco RNAP his-elemental paused elongation complex with CBR9379 [28709 multi-frame micrographs composed of 40 frames each in TIFF format] | Dhingra Y., Landick R., Campbell E.A., Darst S.A. [Pubmed: 42378287] [DOI: 10.1073/pnas.2609228123] |
4.5 TB | 2.8 - 2.9 Å |
| 2026-09-24 |  |
Cryo-EM of Mtb RNAP elongation complex (substrate loading mimic) [34503 multi-frame micrographs composed of 35 frames each in TIFF format] | Dhingra Y., Landick R., Campbell E.A., Darst S.A. [Pubmed: 42378287] [DOI: 10.1073/pnas.2609228123] |
5.9 TB | 3.0 - 3.3 Å |
| 2026-09-21 |  |
Cryo-EM structure of the bovine ATP synthase [multiple data sets in TIFF format] | Nakano A [Pubmed: 42399642] [DOI: 10.1038/s41418-026-01797-4] |
13.0 TB | 2.3 - 7.2 Å |
| 2026-09-21 |  |
Cryo-EM structure of an active dimer of the C. elegans EGFR (LET-23) extracellular region with a domain IV loop deletion bound to LIN-3 [multiple data sets in TIFF and MRC formats] | Zuo Y, Walker K, Han L, Ferguson KM [Pubmed: 42475585] [DOI: 10.1073/pnas.2602436123] |
3.8 TB | 3.36 Å |
| 2026-09-21 |  |
MPNN-fixbb designed RNA molecule [12594 multi-frame micrographs composed of 1116 frames each in EER format] | Haack DBH, Spellmon NS, Favor AF, Kubaney AK, Baker DB, Rudolfs BR, Hingey JH, Mancino AM, Yu ZY, Toor NT, Das RD [Pubmed: 42658941] [DOI: 10.1126/science.aeg6829] |
5.4 TB | 4.0 Å |
| 2026-09-21 |  |
CryoEM Structure of HIV-1 CA hexamer from CA-NC tube in complex with Myxovirus resistance protein B (MxB, also designated Mx2) N-terminus 1-35 [19785 micrographs in MRC format] | Zhu Y, Rey SJ, Shen J, Perilla RJ, Zhang P [DOI: 10.64898/2026.05.07.723526] |
1.7 TB | 2.77 Å |
| 2026-09-18 |  |
Single-particle cryo-EM data of Rhodobacter capsulatus cytochrome bc1 complex with bound endogenous ubiquinone [8883 multi-frame micrographs composed of 40 frames each in TIFF format] | Pietras R, Mielecki B, Sarewicz M, Jaciuk M, Koziej L, Glatt S, Osyczka A [Pubmed: 42679026] [DOI: 10.1073/pnas.2618242123] |
3.1 TB | 2.16 Å |
| 2026-09-18 |  |
WINSdata ROI crops of synchrotron micro-CT applied to the human placenta; EMBO Course 2026 - Volume-Segmantics Training Dataset [4 reconstructed volumes in TIFF format] | Tun W. M, Poologasundarampillai G, Bischof H, Nye G, King O. N. F, Basham M, Tokudome Y, Lewis R. M, Johnstone E. D, Brownbill P, Darrow M, Chernyavsky I. L [DOI: 10.1098/rsif.2021.0140] |
1.1 GB | — |
| 2026-09-14 |  |
Single-particle cryo-EM dataset of Rhodobacter capsulatus cytochrome bc1 complex with 2-alanine insertion in the neck region of iron-sulphur protein (+2Ala mutant) [5166 multi-frame micrographs composed of 40 frames each in TIFF format] | Pietras R, Mielecki B, Sarewicz M, Jaciuk M, Koziej L, Glatt S, Osyczka A [Pubmed: 42679026] [DOI: 10.1073/pnas.2618242123] |
1.8 TB | 2.41 Å |
| 2026-09-11 |  |
Experimentally-grounded benchmark datasets for cryoEM heterogeneous reconstruction methods with engineered Cas9 complexes [multiple data sets in EER and MRCS formats] | Grassetti AV, Kinman LF, Davis JH [DOI: 10.64898/2026.05.04.721978] |
33.2 TB | 2.33 - 3.09 Å |
