Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
오사카 대학의 EMPIAR-PDBj 팀은, 아시아의 EM 연구자가 용량이 큰 EM 이미지를 EMPIAR 데이터베이스에 전송하는 것을 돕고 있습니다. 인터넷을 통하여 EBI (UK)에 직>접 데이터를 전송하는 대신, 이용자는 우편이나 택배를 통하여 하드 디스크를 오사카 대학으로 보내실 수 있습니다. 혹은 인터넷을 이용하여 오사카 대학의 서버로 전>송 하실 수 있습니다. 오사카 대학에 데이터 전송 서비스를 희망하시는 분은 데이터를 보내시기 전에 먼저 이메일 통하여 등록하시고 싶은 EM데이터에 관하여 상담하십시오.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2024-02-09 |  |
5-HT2B receptor bound to LSD in complex with beta-arrestin1 obtained by cryo-electron microscopy (cryoEM) [9617 multi-frame micrographs composed of 50 frames each in TIFF format] | Barros-Alvarez X [Pubmed: 36087581] [DOI: 10.1016/j.neuron.2022.08.006] |
5.0 TB | 3.3 Å |
| 2024-02-08 |  |
Cryo electron tomography of whole mitochondria and released crista membranes isolated from Caenorhabditis elegans [multiple data sets in MRC format] | Buzzard E, McLaren M, Gold VAM [Pubmed: 38164968] [DOI: 10.1042/BCJ20230450] |
159.0 GB | 38.6 Å |
| 2024-02-08 |  |
Single particle Cryo EM of the LRRK2 I2020T mutant bound to GZD-824 [4102 multi-frame micrographs composed of 40 frames each in EER format] | Villagran Suarez A, Leschziner A [Pubmed: 38039358] [DOI: 10.1126/sciadv.adk6191] |
4.6 TB | 3.4 Å |
| 2024-02-08 |  |
Single-particle cryo-EM unaligned micrographs of prefusion SARS-CoV-2 spike omicron B.1.1.529 variant [13697 multi-frame micrographs composed of 50 frames each in TIFF format] | Cerutti G, Guo Y, Liu L, Liu L, Zhang Z, Luo Y, Huang Y, Wang HH, Ho DD, Sheng Z, Shapiro L [Pubmed: 35172173] [DOI: 10.1016/j.celrep.2022.110428] |
3.4 TB | 3.11 Å |
| 2024-02-06 |  |
SpCas9 bound to 18 nucleotide complementary DNA substrate in the checkpoint state [multiple data sets in EER format] | Pacesa M, Loeff L, Querques I, Muckenfuss LM, Sawicka M, Jinek M [Pubmed: 36002571] [DOI: 10.1038/s41586-022-05114-0] |
7.7 TB | 2.54 Å |
| 2024-02-06 |  |
RNA-triggered protein cleavage and cell growth arrest by the type III-E CRISPR nuclease-protease [multiple data sets in TIFF format] | Kato K, Okazaki S, Ishikawa J, Isayama Y, Nishizawa T, Nishimasu H [Pubmed: 36423304] [DOI: 10.1126/science.add7347] |
2.6 TB | 2.49 - 2.84 Å |
| 2024-02-06 |  |
Cryo-EM structure of neutralizing antibody 1-57 in complex with prefusion SARS-CoV-2 spike glycoprotein [2735 multi-frame micrographs composed of 50 frames each in TIFF format] | Cerutti G, Rapp M, Guo Y, Bahna F, Bimela J, Reddem ER, Yu J, Wang P, Liu L, Huang Y, Ho DD, Kwong PD, Sheng Z, Shapiro L [Pubmed: 34111408] [DOI: 10.1016/j.str.2021.05.014] |
746.5 GB | 3.42 Å |
| 2024-02-06 |  |
Raw micrographs of Form1-N2 peptide nanotube [7917 multi-frame micrographs composed of 40 frames each in TIFF format] | Wang F, Gnewou O, Conticello VP, Egelman EH [Pubmed: 35133794] [DOI: 10.1021/acs.chemrev.1c00753] |
1.8 TB | 3.4 Å |
| 2024-02-06 |  |
CryoEM structures of the human CLC-2-AK42 voltage gated chloride channel reveal a ball and chain gating mechanism [stack of 11498 particles in MRC format] | Xu M, Pintilie G, Liu Y, Chiu W, Maduke M | 1.2 TB | 2.46 Å |
| 2024-02-06 |  |
CryoEM structures of the human CLC-2 voltage gated chloride channel reveal a ball and chain gating mechanism [stack of 11404 particles in MRC format] | Xu M, Pintilie G, Liu Y, Chiu W, Maduke M | 1.2 TB | 2.46 Å |
| 2024-02-06 |  |
Single-particle cryo-EM unaligned micrographs of NTD-directed neutralizing antibody 4-18 in complex with prefusion SARS-CoV-2 spike glycoprotein [7711 multi-frame micrographs composed of 50 frames each in TIFF format] | Cerutti G, Guo Y, Zhou T, Gorman J, Lee M, Rapp M, Reddem ER, Yu J, Bahna F, Bimela J, Huang Y, Katsamba PS, Liu L, Nair MS, Rawi R, Olia AS, Wang P, Zhang B, Chuang GY, Ho DD, Sheng Z, Kwong PD, Shapiro L [Pubmed: 33789084] [DOI: 10.1016/j.chom.2021.03.005] |
2.0 TB | 2.97 Å |
| 2024-02-06 |  |
Human CPSF160-WDR33-CPSF30 complex bound to the PAS AAUAAA motif [multiple data sets in TIFF and DM4 formats] | Muckenfuss LM, Jinek M [Pubmed: 29358758] [DOI: 10.1038/s41594-017-0020-6] |
1.2 TB | 3.07 Å |
| 2024-02-01 |  |
Structure and engineering of the type III-E CRISPR-Cas7-11 effector complex [2781 multi-frame micrographs composed of 64 frames each in TIFF format] | Kato K, Okazaki S, Isayama Y, Nishizawa T, Nishimasu H [Pubmed: 35643083] [DOI: 10.1016/j.cell.2022.05.003] |
853.6 GB | 2.45 Å |
| 2024-02-01 |  |
Purified tails from bacteriophage T5 after interaction with E. coli receptor FhuA inserted into nanodiscs - dataset 2 [5733 multi-frame micrographs composed of 40 frames each in MRC format] | Linares R, Arnaud C, Effantin G, Darnault C, Epalle NH, Erba EB, Schoehn G, Breyton C [Pubmed: 36961893] [DOI: 10.1126/sciadv.ade9674] |
917.9 GB | 3.45 - 4.32 Å |
| 2024-02-01 |  |
Structure of BARD1 ARD-BRCTs in complex with H2AKc15ub nucleosomes [multiple data sets in EER and MRC formats] | Foglizzo M, Burdett H, Wilson MD, Zeqiraj E [Pubmed: 37823591] [DOI: 10.1093/nar/gkad793] |
10.4 TB | 3.4 - 3.75 Å |
| 2024-02-01 |  |
Cryo-EM structure NDUFS4 knockout complex I from Mus musculus kidney [3373 multi-frame micrographs composed of 59 frames each in MRC format] | Yin Z, Agip ANA, Bridges HR, Hirst J [Pubmed: 38177503] [DOI: 10.1038/s44318-023-00001-4] |
3.8 TB | 6.2 Å |
| 2024-02-01 |  |
Cryo-EM micrographs of Sweet Potato Mild Mottle Virus [2260 micrographs in MRC format] | Javed A, Byrne MJ, Ranson NA [Pubmed: 37076658] [DOI: 10.1038/s42003-023-04799-x] |
141.3 GB | 2.9 Å |
| 2024-02-01 |  |
Cryo-EM micrographs of Sweet Potato Feathery Mosaic Virus [3276 micrographs in MRC format] | Javed A, Byrne MJ, Ranson NA [Pubmed: 37076658] [DOI: 10.1038/s42003-023-04799-x] |
204.8 GB | 2.6 Å |
| 2024-01-23 |  |
SpCas9 bound to 6 nucleotide complementary DNA substrate [multiple data sets in TIFF and DM4 formats] | Pacesa M, Loeff L, Querques I, Muckenfuss LM, Sawicka M, Jinek M [Pubmed: 36002571] [DOI: 10.1038/s41586-022-05114-0] |
1.5 TB | 3.87 Å |
| 2024-01-23 |  |
Cryo electron microscopy micrographs of high molecular weight fractions from yeast native cell extracts [multiple data sets in MRC format] | Schmidt L, Tueting C, Kyrilis F, Hamdi F, Semchonok DA, Kastritis PL [DOI: 10.1101/2022.07.15.498668] |
4.7 TB | 3.78 - 8.1 Å |
| 2024-01-23 |  |
SPA cryo-EM micrographs of chicken FANCD2-FANCI3D with ds 44-bpDNA [14842 multi-frame micrographs composed of 40 frames each in TIFF format] | Sijacki T, Alcon P, Chen ZA, McLaughlin SH, Shakeel S, Rappsilber J, Passmore LA [Pubmed: 36050501] [DOI: 10.1038/s41594-022-00820-9] |
2.5 TB | 3.53 Å |
| 2024-01-23 |  |
SPA cryo-EM micrographs of chicken FANCD2-FANCI3D alone [1845 multi-frame micrographs composed of 80 frames each in MRC format] | Sijacki T, Alcon P, Chen ZA, McLaughlin SH, Shakeel S, Rappsilber J, Passmore LA [Pubmed: 36050501] [DOI: 10.1038/s41594-022-00820-9] |
2.0 TB | 4.1 Å |
| 2024-01-23 |  |
SPA cryo-EM micrographs of chicken ubiquitinated FANCD2-FANCI3D with ds 44-bpDNA [6515 multi-frame micrographs composed of 40 frames each in MRC format] | Sijacki T, Alcon P, Chen ZA, McLaughlin SH, Shakeel S, Rappsilber J, Passmore LA [Pubmed: 36050501] [DOI: 10.1038/s41594-022-00820-9] |
866.4 GB | 4.4 Å |
| 2024-01-16 |  |
Cryo Electron tomography of germinated polar tubes from Vairimorpha necatrix [multiple data sets in MRC format] | Sharma H, Jespersen N, Ehrenbolger K, Carlson L.A., Barandun J [DOI: 10.1101/2023.05.31.543061] |
94.1 GB | 46.0 Å |
| 2024-01-16 |  |
Single particle cryo-EM dataset of contracted cowpea chlorotic mottle virus in plunge-frozen vitrified ice [6651 multi-frame micrographs composed of 1533 frames each in EER format] | Harder OF, Barrass SV, Drabbels M, Lorenz UJ [Pubmed: 37704664] [DOI: 10.1038/s41467-023-41444-x] |
3.4 TB | 1.64 Å |
