EMPIAR-12591 - Scan 4b according to material & methods [319 micrographs in TIFF format]

EMPIAR-12591

Scan 4b according to material & methods [319 micrographs in TIFF format]

Publication:

Horizontal cell connectivity in the anchovy retina-a 3D electron microscopic study

Guder P, Scheungrab M, Kohnert P, Kolyfetis G, Wanner G, Heß M

BMC biology 23 (2025)

PMID: 40390032

DOI: 10.1186/s12915-025-02242-7

Related EMDB entry:

Deposited:

2025-02-28

Released:

2025-06-09

Last modified:

2025-06-09

Imageset size:

11.44 GB

Imageset DOI:

10.6019/EMPIAR-12591

Experimental metadata:

Download xml json

Contains:

micrographs - single frame

Image Sets

1. scan 4b

Category:

micrographs - single frame

Image format:

TIFF

No. of images or tilt series:

319

Image size:

(6144, 6144)

Pixel type:

UNSIGNED BYTE

Pixel spacing:

(8.0, 40.0)

Details:

SBFSEM series of the anchovy retina from lower Müllerband (first) to scleralmost bipolar cell somata (last)
8 x 8 x 40 nm, affine alignment

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Citations

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He L, Bartesaghi A. (2026)

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Deng Y, Wang S, Xiang M, Li Y, Zhuo L, Cao D, Fu X, Zou Q. (2026)

Chart builder: an interactive tool for user driven data visualization in the electron microscopy data bank.

Fonseca N, Duraisamy AK, Wang Z, Somasundharam S, Tayebinia M, de Oliveira LC, Ma M, Turner J, Patwardhan A, Kleywegt GJ, Hartley M, Morris KL. (2026)

CryoVirusDB: An Annotated Dataset for AI-Based Virus Particle Identification in Cryo-EM Micrographs.

Gyawali R, Dhakal A, Wang L, Cheng J. (2026)

Deep-learning methods for contrast enhancement and artifact reduction in cryo-electron tomography: a systematic analysis of the state of the art and proposed improvements.

Jones HN, Deshmukh A, Pande K. (2026)

CryoGS: High-Quality Cryo-EM Homogeneous Reconstruction by Gaussian Splatting

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Point cloud deformation modeling for particle selection following cryo-EM 2D classification.

Wang X, Mo Z, Li F, Zhang F, Wan X. (2026)

ICECREAM: high-fidelity equivariant cryo-electron tomography.

Kishore V, Debarnot V, Righetto RD, Engel BD, Dokmanić I. (2026)

CryoSift: an accessible and automated CNN-driven tool for cryo-EM 2D class selection.

Schäfer JH, Calza A, Hom K, Damodar P, Peng R, Bogdanović N, Lander GC, Stagg SM, Cianfrocco MA. (2025)