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Electron Microscopy Public Image Archive

EMPIAR-11016
Single particle cryo-EM dataset of mouse heavy chain apoferritin in plunge-frozen vitrified ice [167 multi-frame micrographs composed of 30 frames each in MRC format]
Publication:

Microsecond melting and revitrification of cryo samples: protein structure and beam-induced motion

Harder OF, Voss JM, Olshin PK, Drabbels M, Lorenz UJ

Acta crystallographica. Section D, Structural biology 78 (2022) 883-889

PMID: 35775987

Related EMDB entry:
EMD-14767
Deposited:
2022-04-11
Released:
2022-07-15
Last modified:
2022-07-15
Imageset size:
82.78 GB
Imageset DOI:
10.6019/EMPIAR-11016
Experimental metadata:
Download xml json
Contains:
  • micrographs - multiframe
Image Sets
1. Unaligned multi-frame micrographs of mouse heavy chain apoferritin in plunge-frozen vitrified ice
Category:
micrographs - multiframe
Image format:
MRC
No. of images or tilt series:
167
Image size:
(5410, 3762)
Pixel type:
UNSIGNED BYTE
Pixel spacing:
(0.975, 0.975)
Details:
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Files:
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Citations
AlignPCA-2D: PCA-reduced Euclidean vector alignment for 2D classification in cryo-EM.
Ramírez-Aportela E, Zarrabeitia OL, Fonseca YC, Ceska T, Subramaniam S, Carazo JM, Sorzano COS. (2026)
A variational framework with composite sparse regularization for cryo-electron tomography reconstruction.
Yu C, Xu Z, Zeng Q, Wan X, El-Messiry H, Zhang F, Han R. (2026)
Helical reconstruction of amyloids in cryoSPARC.
Schaefer JH, O'Neill RT, Donnelly JP, Powers ET, Kelly JW, Lander GC. (2026)
An unattended image-processing pipeline for on-the-fly quality assessment and 3D exploration in cryo-EM.
Marchán Torres D, Conesa P, Garcia A, Iceta M, Broche L, Gragera M, Linares R, Kwong HS, Chichón FJ, Svensson O, Arranz R, Effantin G, Kandiah E, Carazo JM, Sorzano COS. (2026)
CryoFSL: an annotation-efficient, few-shot learning framework for robust protein particle picking in cryo-electron microscopy micrographs.
Poudel B, Gyawali R, Dhakal A, Cheng J, Xu D. (2026)
prismPYP: Power-spectrum and image domain learning for self-supervised micrograph evaluation.
He L, Bartesaghi A. (2026)
CryoSIP: unleashing protein high-resolution Cryo-EM via semantic-instance collaborative picking.
Deng Y, Wang S, Xiang M, Li Y, Zhuo L, Cao D, Fu X, Zou Q. (2026)
Unbend, correction of local beam-induced sample motion in cryo-EM images using a 3D spline model.
Kong L, Zottig X, Elferich J, Grigorieff N. (2026)
CryoVirusDB: An Annotated Dataset for AI-Based Virus Particle Identification in Cryo-EM Micrographs.
Gyawali R, Dhakal A, Wang L, Cheng J. (2026)
Chart builder: an interactive tool for user driven data visualization in the electron microscopy data bank.
Fonseca N, Duraisamy AK, Wang Z, Somasundharam S, Tayebinia M, de Oliveira LC, Ma M, Turner J, Patwardhan A, Kleywegt GJ, Hartley M, Morris KL. (2026)
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