Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2022-02-01 |  |
Nudaurelia capensis omega virus procapsid: virus-like particles expressed in Nicotiana benthamiana [multiple data sets in MRC format] | Castells-Graells R, Ribeiro JRS, Domitrovic T, Hesketh EL, Scarff CA, Johnson JE, Ranson NA, Lawson DM, Lomonossoff GP [Pubmed: 34031522] [DOI: 10.1038/s42003-021-02134-w] |
1.0 TB | 6.63 Å |
| 2023-01-30 |  |
Single particle cryo-EM dataset for E. coli MlaFEDB bound to MlaC [multiple data sets in MRC and TIFF formats] | MacRae MR, Coudray N, Bhabha G, Ekiert DC [Pubmed: 37100290] [DOI: 10.1016/j.jbc.2023.104744] |
5.0 TB | 6.6 Å |
| 2022-07-12 |  |
C2-symmetric single-particle cryo-EM map of T. vaginalis FDPF3 - unaligned multi-frame micrographs [stack of 7398 particles in TIFF format] | Bell TA [Pubmed: 35780837] [DOI: 10.1016/j.jbc.2022.102210] |
1.4 TB | 6.6 - 6.8 Å |
| 2023-01-18 |  |
Cryo iDPC-STEM single particle analysis of keyhole limpet hemocyanin [multiple data sets in TIFF format] | Mann DM, Lazic I, Wirix M, de Haas F [Pubmed: 36064775] [DOI: 10.1038/s41592-022-01586-0] |
42.9 GB | 6.51 Å |
| 2020-04-03 |  |
BurrH bound to DNA Origami Goniometer [multiple data sets in MRC and MRCS formats] | Aksel T, Yu Z, Cheng Y, Douglas SM [Pubmed: 33077960] [DOI: 10.1038/s41587-020-0716-8] |
1.3 TB | 6.5 Å |
| 2020-06-19 |  |
Tetrameric SARS-CoV-2 ORF3a in a lipid nanodisc [7092 multi-frame micrographs composed of 50 frames each in TIFF format] | Kern DM, Sorum B, Mali SS, Hoel CM, Sridharan S, Remis JP, Toso DB, Kotecha A, Bautista DM, Brohawn SG [Pubmed: 34158638] [DOI: 10.1038/s41594-021-00619-0] |
4.8 TB | 6.5 Å |
| 2018-11-23 |  |
Cryo-EM Reconstruction of apo EsCas13d [multiple data sets in MRCS format] | Zhang C, Lyumkis D [Pubmed: 30241607] [DOI: 10.1016/j.cell.2018.09.001] |
66.9 GB | 6.5 Å |
| 2022-02-07 |  |
Cryo electron microscopy SMARCAD1 with nucleosome in ADP-BeF3 bound state [11235 multi-frame micrographs composed of 60 frames each in TIFF format] | Markert JW, Luger K [Pubmed: 34652950] [DOI: 10.1126/sciadv.abk2380] |
6.2 TB | 6.49 Å |
| 2020-12-09 |  |
SA-like and SD-like states of human 26S Proteasome with non-cleavable M1-linked hexaubiquitin (dataset 1) [1645 micrographs in MRC format] | Chen X, Walters KJ [Pubmed: 32783951] [DOI: 10.1016/j.str.2020.07.011] |
87.3 GB | 6.47 - 6.75 Å |
| 2024-04-17 |  |
Cryo-EM of MERS 5' proximal stem-loop 5 [multiple data sets in MRC format] | Kretsch RC, Xu L, Zheludev IN, Zhou X, Huang R, Nye G, Li S, Zhang K, Chiu W, Das R [Pubmed: 38427602] [DOI: 10.1073/pnas.2320493121] |
16.7 TB | 6.4 - 6.9 Å |
| 2022-02-07 |  |
Cryo-EM multiframe micrographs of human Pol kappa complexed with DNA and monoubiquitylated PCNA [3889 multi-frame micrographs composed of 45 frames each in TIFF format] | Lancey C, Tehseen M, Bakshi S, Percival M, Takahashi M, Sobhy MA, Raducanu VS, Blair K, Muskett FW, Ragan TJ, Crehuet R, Hamdan SM, De Biasio A [Pubmed: 34667155] [DOI: 10.1038/s41467-021-26251-6] |
1.9 TB | 6.4 Å |
| 2021-10-01 |  |
Cryo-EM structure of the SpCas9 delta4CE Ternary Complex [2570 multi-frame micrographs composed of 60 frames each in TIFF format] | Laughlin TG, Shams A, Savage DF [Pubmed: 34580310] [DOI: 10.1038/s41467-021-25992-8] |
1.5 TB | 6.2 Å |
| 2014-11-06 |  |
Yeast 80S Ribosome - tRNA- Kozak mRNA complexes, Frealign Input Particle Stack [stack of 86866 particles in MRC format] | Svidritskiy E, Brilot AF, Koh CS, Grigorieff N, Korostelev AA [Pubmed: 25043550] [DOI: 10.1016/j.str.2014.06.003] |
42.0 GB | 6.2 - 6.3 Å |
| 2024-02-01 |  |
Cryo-EM structure NDUFS4 knockout complex I from Mus musculus kidney [3373 multi-frame micrographs composed of 59 frames each in MRC format] | Yin Z, Agip ANA, Bridges HR, Hirst J [Pubmed: 38177503] [DOI: 10.1038/s44318-023-00001-4] |
3.8 TB | 6.2 Å |
| 2022-02-25 |  |
CryoEM reconstruction of membrane-bound ESCRT-III filament composed of CHMP1B only [stack of 9661 particles in MRCS format] | Nguyen HC, Talledge N, McCullough J, Sharma A, Moss FR, Iwasa JH, Vershinin MD, Sundquist WI, Frost A [Pubmed: 32251413] [DOI: 10.1038/s41594-020-0404-x] |
3.8 GB | 6.2 Å |
| 2014-11-06 |  |
Yeast 80S Ribosome-Taura Syndrome Virus IRES complex, Frealign Input Particle Stack [stack of 416312 particles in MRC format] | Koh CS, Brilot AF, Grigorieff N, Korostelev AA [Pubmed: 24927574] [DOI: 10.1073/pnas.1406335111] |
273.6 GB | 6.1 Å |
| 2022-01-25 |  |
Single-particle cryoEM data of yeast Ubr1-Ub-N-degron complex (pre-elongation) [4101 multi-frame micrographs composed of 40 frames each in TIFF format] | Pan M, Zhao M [Pubmed: 34789879] [DOI: 10.1038/s41586-021-04097-8] |
1.9 TB | 6.04 Å |
| 2019-03-25 |  |
Catalytic subunit of protein kinase A bound to ATP, manganese, and IP20 movies obtained using Talos Arctica operating at 200 kV equipped with a K2 [4812 multi-frame micrographs composed of 44 frames each in MRC format] | Herzik Jr MA, Wu M, Lander GC [Pubmed: 30833564] [DOI: 10.1038/s41467-019-08991-8] |
619.6 GB | 6.0 Å |
| 2013-08-26 |  |
HIV-1 envelope glycoprotein trimer micrographs [multiple data sets in SPIDER format] | Mao Y, Wang L, Gu C, Herschhorn A, Désormeaux A, Finzi A, Xiang SH, Sodroski JG [Pubmed: 23757493] [DOI: 10.1073/pnas.1307382110] |
586.8 GB | 6.0 Å |
| 2013-10-30 |  |
Pre-fusion structure of trimeric HIV-1 envelope glycoprotein determined by cryo-electron microscopy [3755 micrographs in MRCS format] | Bartesaghi A, Merk A, Borgnia MJ, Milne JLS, Subramaniam S [Pubmed: 24154805] [DOI: 10.1038/nsmb.2711] |
117.8 GB | 6.0 Å |
| 2014-02-21 |  |
Low-contrast particle stack for HIV-1 Env gp160 precursor (Spider stack) [stack of 670023 particles in SPIDER format] | Mao Y, Wang L, Gu C, Herschhorn A, Desormeaux A, Finzi A, Xiang SH, Sodroski JG [Pubmed: 23757493] [DOI: 10.1073/pnas.1307382110] |
164.2 GB | 6.0 Å |
| 2014-02-21 |  |
Low-contrast particle stack for HIV-1 Env gp160 precursor (MRC stack) [stack of 124478 particles in MRC format] | Mao Y, Wang L, Gu C, Herschhorn A, Desormeaux A, Finzi A, Xiang SH, Sodroski JG [Pubmed: 23757493] [DOI: 10.1073/pnas.1307382110] |
38.0 GB | 6.0 Å |
| 2023-07-07 |  |
Cryo-EM SPA dataset for Antibody SKV09 in complex with VEEV VLP (K3 movies/.tif files) [5595 multi-frame micrographs composed of 40 frames each in TIFF format] | Casner RG [Pubmed: 37295404] [DOI: 10.1016/j.cell.2023.05.019] |
776.7 GB | 6.0 Å |
| 2021-04-06 |  |
Cryo-EM structure of the ternary Netrin 1-Neogenin 1-Repulsive Guidance Molecule B complex [1635 multi-frame micrographs composed of 40 frames each in TIFF format] | Robinson RA, Griffiths SC, van de Haar LL, Malinauskas T, van Battum EY, Zelina P, Schwab RA, Karia D, Malinauskaite L, Brignani S, van den Munkhof M, Dudukcu O, De Ruiter AA, Van den Heuvel DMA, Bishop B, Elegheert J, Aricescu AR, Pasterkamp RJ, Siebold C [Pubmed: 33740419] [DOI: 10.1016/j.cell.2021.02.045] |
1.2 TB | 5.98 Å |
| 2020-08-25 |  |
FAK structure from single particle analysis of 2D crystals [multiple data sets in MRC, TIFF and MRCS formats] | Acebron I, Righetto RD, Biyani N, Chami M, Boskovic J, Stahlberg H, Lietha D [Pubmed: 32779739] [DOI: 10.15252/embj.2020104743] |
1.8 TB | 5.96 - 6.32 Å |
