Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2016-06-28 |  |
Designer nanoscale DNA assemblies programmed from the top down [100 micrographs in MRC format] | Veneziano R, Ratanalert S, Zhang K, Zhang F, Yan H, Chiu W, Bathe M [Pubmed: 27229143] [DOI: 10.1126/science.aaf4388] |
7.3 GB | 25.0 Å |
| 2016-06-28 |  |
Designer nanoscale DNA assemblies programmed from the top down [177 micrographs in MRC format] | Veneziano R, Ratanalert S, Zhang K, Zhang F, Yan H, Chiu W, Bathe M [Pubmed: 27229143] [DOI: 10.1126/science.aaf4388] |
13.0 GB | 20.0 Å |
| 2016-06-20 |  |
Lambda excision HJ intermediate [stack of 66033 particles in MRC format] | Laxmikanthan G, Xu C, Brilot AF, Warren D, Steele L, Seah N, Tong W, Grigorieff N, Landy A, Van Duyne G [Pubmed: 27223329] [DOI: 10.7554/elife.14313] |
4.0 GB | 11.0 Å |
| 2016-06-17 |  |
Cryo-EM Structure of the Activated NAIP2/NLRC4 Inflammasome Reveals Nucleated Polymerization [multiple data sets in SPIDER and MRC formats] | Zhang L, Chen S, Ruan J, Wu J, Tong AB, Yin Q, Li Y, David L, Lu A, Wang WL, Marks C, Ouyang Q, Zhang X, Mao Y, Wu H [Pubmed: 26449474] [DOI: 10.1126/science.aac5789] |
1.7 TB | 4.7 - 12.5 Å |
| 2016-06-07 |  |
Structure of TRPV1 in complex with DkTx and RTX, determined in lipid nanodisc [multiple data sets in MRC format] | Gao Y [Pubmed: 27281200] [DOI: 10.1038/nature17964] |
93.8 GB | 2.95 Å |
| 2016-04-15 |  |
2.2 A resolution cryo-EM structure of beta-galactosidase in complex with a cell-permeant inhibitor [multiple data sets in MRC format] | Bartesaghi A, Merk A, Banerjee S, Matthies D, Wu X, Milne JL, Subramaniam S [Pubmed: 25953817] [DOI: 10.1126/science.aab1576] |
631.2 GB | 2.2 Å |
| 2016-04-05 |  |
Subset of image stack used for 3D reconstruction [36694 micrographs in MRC format] | Egelman EH [Pubmed: 25999507] [DOI: 10.1126/science.aaa4181] |
35.9 GB | 3.8 Å |
| 2016-03-16 |  |
Volta phase plate in-focus dataset of T20S proteasome [158 multi-frame micrographs composed of 12 frames each in MRC format] | Danev R, Baumeister W [Pubmed: 26949259] [DOI: 10.7554/eLife.13046] |
50.3 GB | 3.2 Å |
| 2016-03-16 |  |
Cryo-EM dataset of T20S proteasome [293 multi-frame micrographs composed of 12 frames each in MRC format] | Danev R, Baumeister W [Pubmed: 26949259] [DOI: 10.7554/eLife.13046] |
93.3 GB | 3.1 Å |
| 2016-02-04 |  |
Volta phase plate cryo-EM of the small protein complex Prx3 [multiple data sets in MRC and dat formats] | Khoshouei MK [Pubmed: 26817416] [DOI: 10.1038/ncomms10534] |
612.5 GB | 4.4 Å |
| 2016-01-27 |  |
Cryo-electron tomogram of host-free Chlamydia trachomatis with type III secretion system [1 class averages in MRC format] | Nans A, Kudryashev M, Saibil HR, Hayward RD [Pubmed: 26656452] [DOI: 10.1038/ncomms10114] |
11.6 GB | 33.0 Å |
| 2016-01-27 |  |
Cryo-electron tomogram of Chlamydia trachomatis with type III secretion system in contact with HeLa cell [1 class averages in MRC format] | Nans A, Kudryashev M, Saibil HR, Hayward RD [Pubmed: 26656452] [DOI: 10.1038/ncomms10114] |
13.6 GB | 38.0 Å |
| 2016-01-20 |  |
SBF-SEM of ring-stage malaria parasite infected red blood cell [120 micrographs in MRC format] | Sakaguchi M, Miyazaki N, Fujioka H, Kaneko O, Murata K [Pubmed: 26772147] [DOI: 10.1016/j.jsb.2016.01.003] |
293.0 MB | — |
| 2016-01-20 |  |
SBF-SEM of trophozoite-stage malaria parasite infected red blood cell [110 micrographs in MRC format] | Sakaguchi M, Miyazaki N, Fujioka H, Kaneko O, Murata K [Pubmed: 26772147] [DOI: 10.1016/j.jsb.2016.01.003] |
268.6 MB | — |
| 2016-01-20 |  |
SBF-SEM of early schizont-stage malaria parasite infected red blood cell [80 micrographs in MRC format] | Sakaguchi M, Miyazaki N, Fujioka H, Kaneko O, Murata K [Pubmed: 26772147] [DOI: 10.1016/j.jsb.2016.01.003] |
222.1 MB | — |
| 2016-01-20 |  |
SBF-SEM of late schizont-stage malaria parasite infected red blood cell [90 micrographs in MRC format] | Sakaguchi M, Miyazaki N, Fujioka H, Kaneko O, Murata K [Pubmed: 26772147] [DOI: 10.1016/j.jsb.2016.01.003] |
219.7 MB | — |
| 2016-01-14 |  |
Cryo electron tomography of mouse 5-HT3 receptors in lipid vesicles [46 class averages in MRC format] | Kudryashev M, Castano-Diez D, Deluz C, Hassaine G, Grasso L, Graf-Meyer A, Vogel H, Stahlberg H [Pubmed: 26724993] [DOI: 10.1016/j.str.2015.11.004] |
158.8 GB | 12.0 Å |
| 2015-11-24 |  |
Cryo-EM Structures of Synaptic RAG1-RAG2 Complex [multiple data sets in MRC format] | Heng R, Chambers MG, Fu T, Tong AB, Liao M, Wu H [Pubmed: 26548953] [DOI: 10.1016/j.cell.2015.10.055] |
65.9 GB | 3.4 Å |
| 2015-11-19 |  |
Sub-tomogram averaging in RELION [7 class averages in MRC format] | Bharat TA, Scheres SH [Pubmed: 27685097] [DOI: 10.1038/nprot.2016.124] |
842.8 GB | 13.0 Å |
| 2015-11-04 |  |
In vitro assembled bacteriophage phi6 polymerase complex [stack of 798 particles in MRC format] | Ilca SL, Kotecha A, Sun X, Poranen MP, Stuart DI, Huiskonen JT [Pubmed: 26534841] [DOI: 10.1038/ncomms9843] |
8.1 GB | 7.9 Å |
| 2015-10-13 |  |
Cryo-EM reveals the conformation of a substrate analogue in the human 20S proteasome core [545 multi-frame micrographs composed of 17 frames each in MRC format] | da Fonseca PCA, Morris EP [Pubmed: 26133119] [DOI: 10.1038/ncomms8573] |
579.1 GB | 3.5 Å |
| 2015-10-09 |  |
GroEL dataset - NRAMM (06jul12a) [186 micrographs in MRC format] | Stagg SM, Lander GC, Pulokas J, Fellmann D, Cheng A, Quispe JD, Mallick SP, Avila RM, Carragher B, Potter CS [Pubmed: 16762565] [DOI: 10.1016/j.jsb.2006.04.005] |
7.0 GB | 7.8 Å |
| 2015-10-09 |  |
Cryo-electron tomography and subtomogram averaging of Rous-Sarcoma-Virus deltaMBD virus-like particles [1 class averages in MRC format] | Schur FKM, Dick RA, Hagen WJH, Vogt VM, Briggs JAG [Pubmed: 26223638] [DOI: 10.1128/JVI.01502-15] |
248.1 MB | — |
| 2015-10-01 |  |
Tubulin Chaperone complexes TBC-DEG Q73L: alpha beta-tubulin:TBCC complex [stack of 16801 particles in MRC format] | Nithianantham S, Le S, Seto E, Jia W, Leary J, Corbett KD, Moore JK, Al-Bassam J [Pubmed: 26208336] [DOI: 10.7554/eLife.08811] |
1.0 GB | 24.0 Å |
| 2015-10-01 |  |
Tubulin Chaperone complexes TBC-DEG Q73L: alpha beta-tubulin complex [stack of 18361 particles in MRC format] | Nithianantham S, Le S, Seto E, Jia W, Leary J, Corbett KD, Moore JK, Al-Bassam J [Pubmed: 26208336] [DOI: 10.7554/eLife.08811] |
1.1 GB | 24.0 Å |
