Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2022-05-17 |  |
Structures of positive allosteric modulator-bound and unbound active human calcium-sensing receptor [13082 multi-frame micrographs composed of 60 frames each in TIFF format] | Park J, Zuo H, Frangaj A, Fu Z, Yen LY, Zhang Z, Mosyak L, Slavkovich VN, Liu J, Ray KM, Cao B, Vallese F, Geng Y, Chen S, Grassucci R, Dandey VP, Tan YZ, Eng E, Lee Y, Kloss B, Liu Z, Hendrickson WA, Potter CS, Carragher B, Graziano J, Conigrave AD, Frank J, Clarke OB, Fan QR [Pubmed: 34916296] [DOI: 10.1073/pnas.2115849118] |
3.8 TB | 2.7 Å |
| 2022-05-17 |  |
Cryo-EM structure of the human ATP13A2 [multiple data sets in TIFF format] | Tomita A, Daiho T, Kusakizako T, Yamashita K, Ogasawara S, Murata T, Nishizawa T, Nureki O [Pubmed: 34798056] [DOI: 10.1016/j.molcel.2021.11.001] |
3.8 TB | 3.54 - 3.92 Å |
| 2022-05-17 |  |
Conformational rearrangements upon start codon recognition in human 48S translation initiation complex [multiple data sets in MRC and MRCS formats] | Yi SH, Petrychenko V, Schliep JE, Goyal A, Linden A, Chari A, Urlaub H, Stark H, Rodnina MV, Adio S, Fischer N [Pubmed: 35489072] [DOI: 10.1093/nar/gkac283] |
1.1 TB | 3.7 - 4.7 Å |
| 2022-05-11 |  |
Cryo-EM SPA dataset of Megadalton-range protein communities from a Chaetomium thermophilum native cell extract [2808 multi-frame micrographs composed of 13 frames each in MRC format] | Skalidis IS, Kyrilis FLK, Tüting CT, Müller JM, Sorokina MS, Hamdi FH, Sadian YS, Chojnowski GC, Kastritis PLK [Pubmed: 34836937] [DOI: 10.1038/s41467-021-27287-4] |
1.1 TB | 3.84 - 4.52 Å |
| 2022-05-11 |  |
Tilt series and tomograms of cells expressing different non structural proteins (NSPs) of SARS-CoV-2 [multiple data sets in MRC format] | Polshchuk RS, Polishchuk E, De Matteis MA [Pubmed: 35551511] [DOI: 10.1038/s41586-022-04835-6] |
107.1 GB | — |
| 2022-05-10 |  |
CEM-MitoLab: a dataset of ~22K cellular EM 2D images with label maps of ~135K mitochondrial instances, for deep learning [43720 micrographs in TIFF format] | Narayan K, Conrad RW | 2.8 GB | — |
| 2022-05-03 |  |
Cryo-EM Structures of Glucocorticoid Receptor-Hsp90-p23 [the GR Maturation Complex], Hsp90-p23, and MBP-Hsp90-p23 [multiple data sets in MRC format] | Noddings CM, Wang RY, Agard DA [Pubmed: 34937936] [DOI: 10.1038/s41586-021-04236-1] |
494.1 GB | 2.56 - 3.63 Å |
| 2022-05-03 |  |
In situ single particle classification reveals distinct 60S maturation intermediates in cells [multiple data sets in MRC format] | Lucas BA, Zhang K, Loerch S, Grigorieff N [DOI: 10.1101/2022.04.10.487797] |
10.5 GB | — |
| 2022-04-29 |  |
Raw data for "Structure of polymerized type V pilin reveals assembly mechanism involving protease-mediated strand exchange" [1153 micrographs in MRC format] | Shibata S, Shoji M, Okada K, Matsunami H, Matthews M, Imada K, Nakayama K, Wolf M [Pubmed: 32284566] [DOI: 10.1038/s41564-020-0705-1] |
72.1 GB | 3.6 Å |
| 2022-04-29 |  |
Cryogenic electron microscopy structure of full length human meta vinculin [3005 multi-frame micrographs composed of 40 frames each in TIFF format] | Izard T, Rangarajan ES [Pubmed: 33440717] [DOI: 10.3390/ijms22020645] |
744.8 GB | 4.15 - 4.5 Å |
| 2022-04-29 |  |
Cryo electron microscopy of wild-type hyaluronan synthase with UDP [3062 multi-frame micrographs composed of 40 frames each in TIFF format] | Maloney FP, Kuklewicz J, Zimmer J [Pubmed: 35355017] [DOI: 10.1038/s41586-022-04534-2] |
818.1 GB | 3.1 Å |
| 2022-04-29 |  |
Structure of transcription factor UAF in complex with TBP and 35S rRNA promoter DNA [multiple data sets in TIFF format] | Baudin F, Murciano B, Fung HKH, Fromm SA, Mattei S, Mahamid J, Müller CW [Pubmed: 35442737] [DOI: 10.1126/sciadv.abn5725] |
3.1 TB | 2.8 Å |
| 2022-04-26 |  |
Parallel cryo electron tomography (PACE-tomo) of 70S ribosomes [multiple data sets in TIFF and MRC formats] | Eisenstein F, Danev R [Pubmed: 36456783] [DOI: 10.1038/s41592-022-01690-1] |
282.6 GB | 3.1 Å |
| 2022-04-25 |  |
Cryo electron microscopy of in vitro recombinant SAA1.1 amyloid fibrils [multiple data sets in TIFF and JPEG formats] | Schmidt MS [Pubmed: 33579941] [DOI: 10.1038/s41467-021-21129-z] |
525.4 GB | 2.73 - 2.95 Å |
| 2022-04-25 |  |
Cryo EM structure of ΔRing6 LetB [10764 multi-frame micrographs composed of 30 frames each in TIFF format] | Vieni C, Coudray N, Bhabha G, Ekiert DC [Pubmed: 35077766] [DOI: 10.1016/j.jmb.2022.167463] |
3.0 TB | 3.2 Å |
| 2022-04-25 |  |
CryoEM single particle dataset of alpha-latrocrustotoxin monomer [multiple data sets in TIFF format] | Gatsogiannis C, Chen M [Pubmed: 34845192] [DOI: 10.1038/s41467-021-26562-8] |
5.1 TB | 4.03 Å |
| 2022-04-25 |  |
Single particle cryo-EM dataset of Mus musculus mitochondrial complex I bound with an acetogenin inhibitor [1283 multi-frame micrographs composed of 50 frames each in MRC format] | Grba DN, Blaza JN, Bridges HR, Agip AA, Yin Z, Murai M, Miyoshi H, Hirst J [Pubmed: 35063503] [DOI: 10.1016/j.jbc.2022.101602] |
3.3 TB | 3.4 Å |
| 2022-04-25 |  |
Cryo-EM data used for the determination of LACV-L in transcription capped primer cleavage state [3270 multi-frame micrographs composed of 60 frames each in TIFF format] | Malet H, Arragain B, Durieux Trouilleton Q, Cusack S, Schoehn G [Pubmed: 35173159] [DOI: 10.1038/s41467-022-28428-z] |
934.6 GB | 3.9 Å |
| 2022-04-22 |  |
Cryo-EM structure of human U2 snRNP after ATP-dependent remodeling [multiple data sets in TIFF and MRCS formats] | Tholen J, Galej WP, Weis F [Pubmed: 34822310] [DOI: 10.1126/science.abm4245] |
1.5 TB | 2.15 Å |
| 2022-04-19 |  |
Atomic structure of Lanreotide nanotubes revealed by cryo-EM [stack of 631121 particles in MRCS format] | Pieri L, Wang F, Bressanelli S, Egelman EH, Paternostre M [Pubmed: 35042822] [DOI: 10.1073/pnas.2120346119] |
362.5 GB | 2.46 Å |
| 2022-04-19 |  |
In situ architecture of the lipid transport protein VPS13C at ER-lysosomes membrane contacts [5 tilt series in MRC format] | Cai S [Pubmed: 35858323] [DOI: 10.1073/pnas.2203769119] |
29.5 GB | 47.0 Å |
| 2022-04-19 |  |
Cryo-EM micrographs of BMV TLS RNA [multiple data sets in MRC format] | Bonilla SL, Sherlock ME, MacFadden A, Kieft JS [Pubmed: 34793227] [DOI: 10.1126/science.abe8526] |
6.7 TB | 4.3 Å |
| 2022-04-13 |  |
Cryo-EM structure of RNA-induced tau fibrils reveals a small C-terminal core that may nucleate fibril formation [4729 multi-frame micrographs composed of 40 frames each in MRC format] | Abskharon R, Sawaya MR, Boyer DR, Cao Q, Nguyen BA, Cascio D, Eisenberg DS [Pubmed: 35377792] [DOI: 10.1073/pnas.2119952119] |
693.4 GB | 3.4 Å |
| 2022-04-06 |  |
CryoEM Structure of the, UND-PP bound, WaaL O-Antigen Ligase [2378 multi-frame micrographs composed of 50 frames each in MRC format] | Ashraf KU, Nygaard R, Vickery ON, Erramilli SK, Herrera CM, McConville TH, Petrou VI, Giacometti SI, Dufrisne MB, Nosol K, Zinkle AP, Graham CLB, Loukeris M, Kloss B, Skorupinska-Tudek K, Swiezewska E, Roper DI, Clarke OB, Uhlemann AC, Kossiakoff AA, Trent MS, Stansfeld PJ, Mancia F [Pubmed: 35388216] [DOI: 10.1038/s41586-022-04555-x] |
477.2 GB | 3.23 Å |
| 2022-04-04 |  |
Cryo-EM micrographs of GABA(A)Rs purified from cells expressing human full-length alpha4, beta3 and gamma2 subunits, in presence of GABA and nanobody Nb25 [14346 multi-frame micrographs composed of 48 frames each in TIFF format] | Sente A, Desai R, Naydenova K, Malinauskas T, Jounaidi Y, Miehling J, Zhou X, Masiulis S, Hardwick SW, Chirgadze DY, Miller KW, Aricescu AR [Pubmed: 35355020] [DOI: 10.1038/s41586-022-04517-3] |
3.8 TB | 3.0 - 3.1 Å |
