Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
오사카 대학의 EMPIAR-PDBj 팀은, 아시아의 EM 연구자가 용량이 큰 EM 이미지를 EMPIAR 데이터베이스에 전송하는 것을 돕고 있습니다. 인터넷을 통하여 EBI (UK)에 직>접 데이터를 전송하는 대신, 이용자는 우편이나 택배를 통하여 하드 디스크를 오사카 대학으로 보내실 수 있습니다. 혹은 인터넷을 이용하여 오사카 대학의 서버로 전>송 하실 수 있습니다. 오사카 대학에 데이터 전송 서비스를 희망하시는 분은 데이터를 보내시기 전에 먼저 이메일 통하여 등록하시고 싶은 EM데이터에 관하여 상담하십시오.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2021-11-15 |  |
Apoferritin 20% glycerol, 300kV [1859 multi-frame micrographs composed of 35 frames each in TIFF format] | Basanta B, Hirschi MM, Grotjahn DA, Lander GC [Pubmed: 34981768] [DOI: 10.1107/S2059798321012110] |
477.7 GB | 2.1 Å |
| 2021-11-12 |  |
WT MDA5-dsRNA filaments in complex with ADP [4680 multi-frame micrographs composed of 40 frames each in TIFF format] | Yu Q, Modis Y [Pubmed: 34795277] [DOI: 10.1038/s41467-021-27062-5] |
791.8 GB | 3.4 - 3.9 Å |
| 2021-11-12 |  |
Disease variant M854K MDA5-dsRNA filaments in complex with ADP-AlF4 [2177 multi-frame micrographs composed of 60 frames each in TIFF format] | Yu Q, Modis Y [Pubmed: 34795277] [DOI: 10.1038/s41467-021-27062-5] |
2.5 TB | 4.26 - 4.3 Å |
| 2021-11-12 |  |
Nog1-TAP associated immature ribosomal particles from S. cerevisiae depleted of rpL25 [6088 multi-frame micrographs composed of 40 frames each in MRC format] | Milkereit P, Pöll G [Pubmed: 34813592] [DOI: 10.1371/journal.pone.0252497] |
3.8 TB | 3.5 - 3.9 Å |
| 2021-11-12 |  |
Nog1 TAP associated immature ribosomal particles from S. cerevisiae [6828 multi-frame micrographs composed of 40 frames each in MRC format] | Milkereit P, Pöll G [Pubmed: 34813592] [DOI: 10.1371/journal.pone.0252497] |
4.3 TB | 3.1 - 4.72 Å |
| 2021-11-12 |  |
Nog1-TAP associated immature ribosomal particles from S.cerevisae depleted of rpL2 [4024 multi-frame micrographs composed of 40 frames each in MRC format] | Milkereit P, Pöll G [Pubmed: 34813592] [DOI: 10.1371/journal.pone.0252497] |
4.9 TB | 3.7 - 4.7 Å |
| 2021-11-10 |  |
Structural mechanism of GTPase-powered ribosome-tRNA movement [multiple data sets in MRC and MRCS formats] | Petrychenko V, Peng B-Z, Schwarzer AP, Peske F, Rodnina MV, Fischer N [Pubmed: 34635670] [DOI: 10.1038/s41467-021-26133-x] |
987.5 GB | 2.35 - 9.5 Å |
| 2021-11-09 |  |
CryoEM structure of human LRRC8D [3399 multi-frame micrographs composed of 40 frames each in TIFF format] | Nakamura R, Kasuya G, Yokoyama T, Shirouzu M, Ishitani R, Nureki O [Pubmed: 32415200] [DOI: 10.1038/s42003-020-0951-z] |
1.7 TB | 4.36 Å |
| 2021-11-09 |  |
Single particle cryo-EM of the complex between interphotoreceptor retinoid-binding protein and a monoclonal antibody [2649 multi-frame micrographs composed of 35 frames each in TIFF format] | Sears AE, Albiez S, Gulati S, Wang B, Kiser P, Kovacik L, Engel A, Stahlberg H, Palczewski K [Pubmed: 32860273] [DOI: 10.1096/fj.202000796RR] |
729.9 GB | 7.4 Å |
| 2021-11-09 |  |
Structure of human GABA(B) receptor in an inactive state [3435 multi-frame micrographs composed of 60 frames each in MRC format] | Park J, Fu Z, Frangaj A, Liu J, Mosyak L, Shen T, Slavkovich VN, Ray KM, Taura J, Cao B, Geng Y, Zuo H, Kou Y, Grassucci R, Chen S, Liu Z, Lin X, Williams JP, Rice WJ, Eng ET, Huang RK, Soni RK, Kloss B, Yu Z, Javitch JA, Hendrickson WA, Slesinger PA, Quick M, Graziano J, Yu H, Fiehn O, Clarke OB, Frank J, Fan QR [Pubmed: 32581365] [DOI: 10.1038/s41586-020-2452-0] |
854.1 GB | 3.3 Å |
| 2021-11-09 |  |
AL amyloid fibril from a glycosylated lambda 1 light chain [3032 multi-frame micrographs composed of 40 frames each in TIFF format] | Radamaker L, Schmidt M, Fändrich M, Karimi-Farsijani S [Pubmed: 34741031] [DOI: 10.1038/s41467-021-26553-9] |
495.9 GB | 3.1 Å |
| 2021-11-09 |  |
Multi-modal adaptor-clathrin contacts drive coated vesicle assembly [stack of 54488 particles in MRCS format] | Smith SM, Larocque G, Wood KM, Morris KL, Roseman AM, Sessions RB, Royle SJ, Smith CJ [Pubmed: 34487371] [DOI: 10.15252/embj.2021108795] |
25.0 GB | 10.5 Å |
| 2021-11-09 |  |
Cryo-electron microscopy reconstruction of leukotriene C4 bound bovine MRP1 [2629 multi-frame micrographs composed of 50 frames each in TIFF format] | Johnson ZL, Chen J [Pubmed: 28238471] [DOI: 10.1016/j.cell.2017.01.041] |
938.2 GB | 3.34 Å |
| 2021-11-08 |  |
Cryo electron tomography of spinach leaf tissue [1 tilt series in MRC format] | Zhang J, Zhang D, Sun L, Ji G, Huang X, Niu T, Xu J, Ma C, Zhu Y, Gao N, Xu W, Sun F [Pubmed: 34174447] [DOI: 10.1016/j.jsb.2021.107763] |
2.2 GB | — |
| 2021-11-08 |  |
Hedgehog receptor Patched (PTCH1) in complex with a conformation selective nanobody TI23 [stack of 307652 particles in MRCS format] | Zhang Y, Lu WJ, Bulkley DP, Liang J, Ralko A, Han S, Roberts KJ, Li A, Cho W, Cheng Y, Manglik A, Beachy PA [Pubmed: 33139559] [DOI: 10.1073/pnas.2011560117] |
75.2 GB | 3.4 Å |
| 2021-11-08 |  |
Frame-aligned tilt series of cryo-FIB-milled HEK293 cells treated with taxol [40 tilt series in MRC format] | Watanabe R, Buschauer R, Böhning J, Audagnotto M, Lasker K, Lu TW, Boassa D, Taylor S, Villa E [Pubmed: 32783917] [DOI: 10.1016/j.cell.2020.08.004] |
2.1 GB | — |
| 2021-11-08 |  |
Frame aligned tilt series of cryo-FIB milled HEK293 cells expressing pathogenic LRRK2(I2020T)mutant [39 tilt series in MRC format] | Watanabe R, Buschauer R, Böhning J, Audagnotto M, Lasker K, Lu TW, Boassa D, Taylor S, Villa E [Pubmed: 32783917] [DOI: 10.1016/j.cell.2020.08.004] |
2.1 GB | — |
| 2021-11-08 |  |
Single-particle cryo-EM of the full-length merozoite surface protein 1 from Plasmodium falciparum [multiple data sets in MRC and MRCS formats] | Dijkman PM, Marzluf T, Zhang Y, Chang SYS, Helm D, Lanzer M, Bujard H, Kudryashev M [Pubmed: 34078606] [DOI: 10.1126/sciadv.abg0465] |
4.3 TB | 3.1 - 3.6 Å |
| 2021-11-08 |  |
VHUT-cryo-FIB, a method to fabricate frozen-hydrated lamella of tissue specimen for in situ cryo-electron tomography [13 multi-frame micrographs composed of 30 frames each in TIFF format] | Zhang J [Pubmed: 34174447] [DOI: 10.1016/j.jsb.2021.107763] |
112.1 GB | 18.0 Å |
| 2021-11-08 |  |
Monitoring reversion of hepatitis C virus-induced cellular alterations by Direct-Acting Antivirals using cryo Soft X-ray Tomography and Infrared Microscopy [7 reconstructed volumes in TIFF format] | Perez-Berna AJ, Benseny-Cases N, Rodríguez MJ, Valcarcel R, Carrascosa JL, Gastaminzab P, Pereiroa E [Pubmed: 34726165] [DOI: 10.1107/S2059798321009955] |
260.2 MB | — |
| 2021-11-05 |  |
MukBEF(E1407Q)-MatP-DNA in the presence of ATP [multiple data sets in TIFF format] | Bürmann F, Löwe J [Pubmed: 34739874] [DOI: 10.1016/j.molcel.2021.10.011] |
8.5 TB | 3.1 - 13.0 Å |
| 2021-11-05 |  |
CryoEM SPA dataset for NB21, SARS-Cov-2 and NB36 trimeric complex [9390 multi-frame micrographs composed of 63 frames each in TIFF format] | Huang W [Pubmed: 34344900] [DOI: 10.1038/s41467-021-24963-3] |
5.0 TB | 3.55 Å |
| 2021-11-02 |  |
Proton-powered peptide transporter SbmA in lipid nanodisc complexed with Fab S11-1 (SbmA-FabS11-1-MccB17) [7286 multi-frame micrographs composed of 40 frames each in TIFF format] | Ghilarov D, Inaba-Inoue S, Stepien P, Qu F, Michalczyk E, Pakosz Z, Nomura N, Ogasawara S, Walker GC, Rebuffat S, Iwata S, Heddle JG, Beis K [Pubmed: 34516884] [DOI: 10.1126/sciadv.abj5363] |
2.5 TB | 3.59 Å |
| 2021-11-02 |  |
Cryo electron microscopy of ex-vivo murine SAA amyloid fibrils [1429 multi-frame micrographs composed of 40 frames each in TIFF format] | Schmidt MS, Fändrich MF [Pubmed: 30846696] [DOI: 10.1038/s41467-019-09033-z] |
533.9 GB | 3.0 Å |
| 2021-11-02 |  |
CryoEM single particle dataset for NanR dimer-DNA hetero-complex. [3465 multi-frame micrographs composed of 32 frames each in MRC format] | Venugopal H, Horne CR, Ramm G, Dobson RCJ [Pubmed: 33790291] [DOI: 10.1038/s41467-021-22253-6] |
364.8 GB | 3.9 Å |
