Due to a storage failure, some data files are currently inaccessible.
We are working to restore access, but if you need the data urgently, please use EMPIAR-EBI.
We are restoring lost files from backups in the following order:
We apologize for the inconvenience and appreciate your understanding.
오사카 대학의 EMPIAR-PDBj 팀은, 아시아의 EM 연구자가 용량이 큰 EM 이미지를 EMPIAR 데이터베이스에 전송하는 것을 돕고 있습니다. 인터넷을 통하여 EBI (UK)에 직>접 데이터를 전송하는 대신, 이용자는 우편이나 택배를 통하여 하드 디스크를 오사카 대학으로 보내실 수 있습니다. 혹은 인터넷을 이용하여 오사카 대학의 서버로 전>송 하실 수 있습니다. 오사카 대학에 데이터 전송 서비스를 희망하시는 분은 데이터를 보내시기 전에 먼저 이메일 통하여 등록하시고 싶은 EM데이터에 관하여 상담하십시오.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2025-12-07 | Transporter associated with antigen processing (TAP) bound to the 9-mer peptide RRYQKSTEL and ATP [4266 multi-frame micrographs composed of 40 frames each in TIFF format] | Lee J, Manon V, Chen J | 3.3 TB | 3.6 Å | |
| 2025-12-07 | Transporter associated with antigen processing (TAP) bound to the viral protein BNLF2a from Epstein-Barr virus [8676 multi-frame micrographs composed of 40 frames each in TIFF format] | Lee J, Manon V, Chen J | 6.5 TB | 3.8 Å | |
| 2025-12-07 | Transporter associated with antigen processing (TAP) bound to ATP, ADP, and the viral protein rhUS6 from rhesus cytomegalovirus [18184 multi-frame micrographs composed of 30 frames each in TIFF format] | Lee J, Manon V, Chen J | 6.7 TB | 3.3 Å | |
| 2025-12-07 | PSI-LHCI of Euglena gracilis strain Z [7575 multi-frame micrographs composed of 50 frames each in TIFF format] | Kato K, Nakajima Y, Shen JR, Nagao R [Pubmed: 41171917] [DOI: 10.1126/sciadv.aea6241] |
1.4 TB | 2.83 Å | |
| 2025-12-07 | Raw images of human URAT1 (R477S) complexed with urate [10997 multi-frame micrographs composed of 32 frames each in TIFF format] | Hongwu Qian HW [Pubmed: 39146184] [DOI: 10.1016/j.celrep.2024.114628] |
4.9 TB | 3.8 Å | |
| 2025-12-07 | Single particle Cryo EM of the C-terminal half of LRRK2 bound to RN277 [13972 multi-frame micrographs composed of 50 frames each in MRC format] | Sanz-Marillo M [Pubmed: 40465731] [DOI: 10.1126/sciadv.adt2050] |
13.5 TB | 3.35 Å | |
| 2025-12-07 | Genetically Encoded FerriTag as a Specific Label for Cryo-Electron Tomography [3 reconstructed volumes in MRC format] | Wang C, Khosrozadeh A, Iacovache I, Zuber B [Pubmed: 40925364] [DOI: 10.1016/j.str.2025.08.013] |
959.0 MB | — | |
| 2025-12-07 | SpCas9 with computationally designed SpCas9_b3 binder [15502 multi-frame micrographs composed of 40 frames each in MRC format] | Pacesa M, Nickel L, Correia BE [Pubmed: 39677777] [DOI: 10.1101/2024.09.30.615802] |
6.2 TB | 3.3 Å | |
| 2025-12-07 | Single particle Cryo-EM structure of the Pdr5 drug resistance transporter [multiple data sets in TIFF format] | Harris A, Wagner M, Du D, Raschka S, Nentwig LM, Gohlke H, Smits SHJ, Luisi BF, Schmitt L [Pubmed: 34489436] [DOI: 10.1038/s41467-021-25574-8] |
3.8 TB | 2.85 - 3.77 Å | |
| 2025-12-07 | Cryo-EM micrographs of PbAbiF dimer bound to ncRNA [4272 multi-frame micrographs composed of 40 frames each in TIFF format] | Wilkinson ME, Zhang F [Pubmed: 39970912] [DOI: 10.1016/j.cell.2025.01.034] |
587.8 GB | 3.56 Å | |
| 2025-12-07 | Melbournevirus Mini variant Nucleosome [multiple data sets in EER and MRC formats] | Villalta A, Luger K [Pubmed: 40715086] [DOI: 10.1038/s41467-025-62031-2] |
3.6 TB | 4.41 Å | |
| 2025-12-07 | Cryo electron tomography of wild-type Drosophila nephrocytes [multiple data sets in MRC format] | Moser D, Lang K, Birtasu AN, Grahammer F, Helmstaedter M, Scheffer MP, Hermle T, Frangakis AF [DOI: 10.1038/s41467-025-64347-5] |
1.5 TB | 38.0 Å | |
| 2025-12-07 | Single particle cryoEM structure of Latrophilin-3 (ADGRL3) HormR and GAIN domains in the context of the holoreceptor [6976 multi-frame micrographs composed of 58 frames each in TIFF format] | Kordon SP, Bandekar SJ, Arac D [Pubmed: 39627215] [DOI: 10.1038/s41467-024-54836-4] |
5.8 TB | 3.9 Å | |
| 2025-12-07 | Single particle cryoEM of Jumbophage Gp316/JADA protein [15625 multi-frame micrographs composed of 50 frames each in EER format] | Muralidharan A, Rita Costa A, Fierlier D, van den Berg DF, van den Bossche H, Zoumaro-Djayoon A, Pabst M, Pacesa M, Correia BE, Brouns SJJ [DOI: 10.1101/2025.07.08.663546] |
6.4 TB | 2.1 Å | |
| 2025-12-07 | Human antibody Fab MPV498 bound to hMPV B2 post-fusion F [7900 micrographs in MRC format] | Khalil AM, Esfahani BG, Miller RJ, Huang J, Kuan G, Balmaseda A, Gordon A, Mousa JJ [DOI: 10.1101/2025.08.29.673069] |
505.6 GB | 2.61 Å | |
| 2025-12-07 | Human antibody Fab MPV510 bound to hMPV DsCav-ES2-IPDS F protein [8000 micrographs in MRC format] | Khalil AM, Esfahani BG, Miller RJ, Huang J, Kuan G, Balmaseda A, Gordon A, Mousa JJ [DOI: 10.1101/2025.08.29.673069] |
4.1 TB | 2.85 Å | |
| 2025-12-07 | Human antibody Fab MPV513 bound to hMPV DsCav-ES2 [6100 micrographs in MRC format] | Khalil AM, Esfahani BG, Miller RJ, Huang J, Kuan G, Balmaseda A, Gordon A, Mousa JJ [DOI: 10.1101/2025.08.29.673069] |
1.1 TB | 3.94 Å | |
| 2025-12-07 | Immunological and structural evaluation of the intranasally administrated CVB1 whole-virus and VLP vaccines [multiple data sets in MRC and TIFF formats] | Soppela S, Plavec Z, Grohn S, Jartti M, Oikarinen S, Laajala M, Marjomaki V, Butcher SJ, Hankaniemi MM, Mustonen I [Pubmed: 38978565] [DOI: 10.21203/rs.3.rs-4545395/v1] |
1.6 TB | 2.15 Å | |
| 2025-12-06 | CryoEM of E. coli RNA polymerase Sigma N transcription initiation intermediates [multiple data sets in TIFF, MRC and MRCS formats] | Mueller AU, Molina N, Nixon BT, Darst SA [Pubmed: 40759887] [DOI: 10.1038/s41467-025-61837-4] |
10.5 TB | 2.6 - 3.1 Å | |
| 2025-12-05 | CryoEM of mycobacterial open-gate proteasome complexed with engineered bacterial enhancer binding protein (bEBP) [multiple data sets in TIFF and MRC formats] | Mueller AU, Molina N, Nixon BT, Darst SA [Pubmed: 40759887] [DOI: 10.1038/s41467-025-61837-4] |
479.4 GB | 4.6 Å | |
| 2025-12-03 | Motion-corrected single-particle cryo-EM dataset of PI3KC3-C1 bound to RAB1A(Q70L) [multiple data sets in MRC format] | Cook ASI, Hurley JH, Chen M [Pubmed: 39913640] [DOI: 10.1126/science.adl3787] |
3.5 TB | 2.73 - 4.5 Å | |
| 2025-12-03 | Human polymerase epsilon bound to PCNA and DNA with an in-situ-generated mismatch [18426 multi-frame micrographs composed of 50 frames each in TIFF format] | Wang FW [Pubmed: 40440070] [DOI: 10.1073/pnas.2507232122] |
13.4 TB | 3.11 - 3.6 Å | |
| 2025-12-03 | Human VDAC1 in cMSP1delH5 circularized nanodiscs. [multiple data sets in EER and MRC formats] | Broutzakis G, Gatsogiannis C [Pubmed: 41145501] [DOI: 10.1038/s41467-025-65363-1] |
4.4 TB | 5.73 Å | |
| 2025-12-03 | GLIC in MSP1E3D1 nanodisc at pH 4.0 [14076 multi-frame micrographs composed of 1953 frames each in EER format] | Li Z, Bharambe N, Manishrao Lande K, Feddersen B, Manikkoth Balakrishna A, Biggin PC, Sahu G, Basak S [Pubmed: 38580666] [DOI: 10.1038/s41467-024-47370-w] |
10.2 TB | 2.74 - 3.45 Å | |
| 2025-12-03 | GLIC Y251A mutant in MSP1E3D1 nanodisc at pH 2.5 [10188 multi-frame micrographs composed of 1251 frames each in EER format] | Li Z, Bharambe N, Manishrao Lande K, Feddersen B, Manikkoth Balakrishna A, Biggin PC, Sahu G, Basak S [Pubmed: 41129221] [DOI: 10.1073/pnas.2512811122] |
6.2 TB | 2.87 Å |