Due to a storage failure, some data files are currently inaccessible.
We are working to restore access, but if you need the data urgently, please use EMPIAR-EBI.
We are restoring lost files from backups in the following order:
We apologize for the inconvenience and appreciate your understanding.
오사카 대학의 EMPIAR-PDBj 팀은, 아시아의 EM 연구자가 용량이 큰 EM 이미지를 EMPIAR 데이터베이스에 전송하는 것을 돕고 있습니다. 인터넷을 통하여 EBI (UK)에 직>접 데이터를 전송하는 대신, 이용자는 우편이나 택배를 통하여 하드 디스크를 오사카 대학으로 보내실 수 있습니다. 혹은 인터넷을 이용하여 오사카 대학의 서버로 전>송 하실 수 있습니다. 오사카 대학에 데이터 전송 서비스를 희망하시는 분은 데이터를 보내시기 전에 먼저 이메일 통하여 등록하시고 싶은 EM데이터에 관하여 상담하십시오.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2025-12-22 | Single particle cryo-EM dataset of plunge-frozen GroEL [9759 multi-frame micrographs composed of 1206 frames each in EER format] | Barrass SV, Esser TK, Mowry NJ, Eriksson L, Hruby J, Seeley LT, Drabbels M, Baker LA, Rauschenbach S, Lorenz UJ | 5.9 TB | 1.9 Å | |
| 2025-12-22 | Single particle cryo-EM dataset of soft-landed and rehydrated GroEL [multiple data sets in EER format] | Barrass SV, Esser TK, Mowry NJ, Eriksson L, Hruby J, Seeley LT, Drabbels M, Baker LA, Rauschenbach S, Lorenz UJ | 20.7 TB | 3.9 Å | |
| 2025-12-22 | Single particle cryo-EM dataset of soft-landed beta-galactosidase [945 multi-frame micrographs composed of 936 frames each in EER format] | Barrass SV, Esser TK, Mowry NJ, Eriksson L, Hruby J, Seeley LT, Drabbels M, Baker LA, Rauschenbach S, Lorenz UJ | 494.9 GB | 5.9 Å | |
| 2025-12-22 | Transporter associated with antigen processing (TAP) bound to ATP and ADP [13928 multi-frame micrographs composed of 30 frames each in TIFF format] | Lee J, Manon V, Chen J | 6.5 TB | 3.2 - 3.7 Å | |
| 2025-12-22 | Transporter associated with antigen processing (TAP) EQ mutant bound to ATP and the viral protein bUL49.5 from bovine herpesvirus [19307 multi-frame micrographs composed of 1098 frames each in TIFF format] | Lee J, Manon V, Chen J | 8.6 TB | 2.44 - 3.1 Å | |
| 2025-12-22 | Transporter associated with antigen processing (TAP) EQ mutant bound to ATP and the viral protein CPXV012 from cowpox virus [24354 multi-frame micrographs composed of 30 frames each in TIFF format] | Lee J, Manon V, Chen J | 12.6 TB | 3.0 Å | |
| 2025-12-22 | Common beta cytokine complex micrographs [multiple data sets in TIFF format] | Caveney NA, Rodriguez GE, Pollmann C, Meyer T, Borowska MT, Wilson SC, Wang N, Xiang X, Householder KD, Tao P, Su LL, Saxton RA, Piehler J, Garcia KC [Pubmed: 38614096] [DOI: 10.1016/j.molcel.2024.03.023] |
9.3 TB | 3.6 - 3.8 Å | |
| 2025-12-22 | Cryo electron ptychography of the Thermoplasma acidophilum 20S proteasome [multiple data sets in MRC format] | Li T, Li S, Yan Z, Li X | 1.8 TB | 6.3 - 7.79 Å | |
| 2025-12-22 | High-resolution structural analysis of the cyanobacterial photosystem I complex reveals independent incorporation of small transmembrane and cytoplasmic subunits [9999 multi-frame micrographs composed of 1386 frames each in EER format] | Charras Q, Gupta S, Tichy M, Al-Amoudi A, Lukes M, Konik P, Sobotka R, Novak P, Komenda J, Naschberger A [Pubmed: 40859630] [DOI: 10.1016/j.xplc.2025.101493] |
3.4 TB | 1.83 Å | |
| 2025-12-22 | Complex of BREX proteins BrxB and PglZ from Salmonella typhimurium [multiple data sets in MRC and TIFF formats] | Doyle LA, Stoddard BL, Kaiser BK, Blower TR [Pubmed: 40548935] [DOI: 10.1093/nar/gkaf540] |
9.1 TB | 4.45 Å | |
| 2025-12-21 | Cryo electron tomography of PR/8/34 influenza A virus [multiple data sets in TIFF format] | Huang QJ, Schiffer CA, Somasundaran M [DOI: 10.3791/68636] |
33.6 GB | — | |
| 2025-12-19 | Leopard-EM: An extensible 2DTM package to accelerate in situ structural biology [multiple data sets in MRC and EER formats] | Giammar MD, Dickerson JL, Hall LN, Lucas BA | 482.7 GB | — | |
| 2025-12-19 | Human Connexin 26 dodecamer at 90mmHg PCO2, pH7.4 [multiple data sets in TIFF, MRC and MRCS formats] | Brotherton DH, Savva CG, Ragan TJ, Dale N, Cameron AD [Pubmed: 35276081] [DOI: 10.1016/j.str.2022.02.010] |
5.4 TB | 1.9 Å | |
| 2025-12-19 | Cryo-EM structure of the prostaglandin D2 receptor 1 (DP1) complex in inactive and active states [multiple data sets in MRC and TIFF formats] | Davoudinasab B, Raskovalov A, Lee W, Kim D, Kim H, Lam JH, Han GW, Katritch V, Cherezov V [Pubmed: 41062467] [DOI: 10.1038/s41467-025-64002-z] |
6.0 TB | 2.45 - 2.89 Å | |
| 2025-12-19 | Motion-corrected micrographs for herpesvirus helicase-primase complex bound to forked DNA with inhibitor Pritelivir [9216 micrographs in MRC format] | Baranovskiy AG, He Q, Suwa Y, Morstadt LM, Babayeva ND, Lim CJ, Tahirov TH [Pubmed: 41202142] [DOI: 10.1126/sciadv.adz1989] |
1.6 TB | 3.14 - 3.42 Å | |
| 2025-12-18 | Cryo ET of Native Hippocampal Glutamatergic Synapses Using Dimeric AuNP Labeling [33 multi-frame micrographs composed of 576 frames each in EER format] | Kim H, Spangler CJ, Matsui A, Elferich J, Gouaux E, Kim J, Roseborough A, Nyman M [Pubmed: 41284882] [DOI: 10.1073/pnas.2524034122] |
41.6 GB | — | |
| 2025-12-18 | 1.8 A structure of SiO2-sealed and revitrified (210 us) mouse heavy chain Apoferritin [8398 multi-frame micrographs composed of 50 frames each in EER format] | Curtis WA, Hruby J, Krüger CR, Barrass SV, Drabbels M, Lorenz UJ [DOI: 10.1101/2025.05.05.652279] |
2.6 TB | 1.8 Å | |
| 2025-12-17 | Mouse RNF213 coupled to a UBE2L3 activity-based probe in presence of ATPγS [11714 micrographs in MRC format] | Clausen T, Ahel J [Pubmed: 40360510] [DOI: 10.1038/s41467-025-59444-4] |
732.2 GB | 3.8 Å | |
| 2025-12-17 | Mouse RNF213 double ATPase mutant (Walker B3, Walker B4) in presence of ATP [multiple data sets in TIFF and MRC formats] | Clausen T, Ahel J [Pubmed: 40360510] [DOI: 10.1038/s41467-025-59444-4] |
1.9 TB | 4.5 Å | |
| 2025-12-17 | Cryo ET of Native Hippocampal Glutamatergic Synapses Using Dimeric AuNP Labeling [multiple data sets in EER format] | Kim H, Spangler CJ, Matsui A, Elferich J, Gouaux E, Kim J, Roseborough A, Nyman M [Pubmed: 41284882] [DOI: 10.1073/pnas.2524034122] |
18.4 GB | — | |
| 2025-12-17 | Electron tomography of mitochondria from adult and aged mice hearts [multiple data sets in TIFF format] | Barrientos G, Molina-Riquelme I, Breitsprecher L, Busch KB, Eisner V [Pubmed: 41468425] [DOI: 10.1073/pnas.2508911123] |
523.1 MB | — | |
| 2025-12-17 | Raw data for cryo-tomograms of Agrobacterium phage 7-7-1 and Agrobacterium sp. H13-3 [841 tilt series in MRC format] | Noteborn WEM, Hoeksma T, Rouchen OY, Briegel A [Pubmed: 41353512] [DOI: 10.1038/s42003-025-09319-7] |
194.7 GB | — | |
| 2025-12-17 | 1.7 A structure of conventional mouse heavy chain Apoferritin [935 multi-frame micrographs composed of 50 frames each in EER format] | Curtis WA, Hruby J, Krüger CR, Barrass SV, Drabbels M, Lorenz UJ [DOI: 10.1101/2025.05.05.652279] |
370.1 GB | 1.7 Å | |
| 2025-12-16 | Structure of a LGR dimer from Caenorhabditis elegans in apo state [multiple data sets in TIFF format] | Gong Z, Hendrickson WA [Pubmed: 41315418] [DOI: 10.1038/s41467-025-66676-x] |
1.8 TB | 3.79 Å | |
| 2025-12-16 | Rat GluN1-GluN2B NMDA receptor channel in complex with glutamate [multiple data sets in TIFF format] | Chou THC, Furukawa FH [Pubmed: 39085540] [DOI: 10.1038/s41586-024-07742-0] |
1.2 TB | 3.9 Å |