Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2022-07-26 |  |
Human Kv1.3 with a Fab-ShK fusion [5079 multi-frame micrographs composed of 48 frames each in TIFF format] | Meyerson JR, Selvakumar P [Pubmed: 35788586] [DOI: 10.1038/s41467-022-31285-5] |
2.0 TB | 3.39 Å |
| 2022-01-21 |  |
Structure of pathological TDP-43 filaments from ALS with FTLD (Individual 1, motor cortex) [12245 multi-frame micrographs composed of 40 frames each in TIFF format] | Arseni D, Hasegawa M, Murzin AG, Kametani F, Arai M, Yoshida M, Ryskeldi-Falcon B [Pubmed: 34880495] [DOI: 10.1038/s41586-021-04199-3] |
2.0 TB | 2.94 Å |
| 2024-04-16 |  |
Mycobacterium phage Adjutor [6667 multi-frame micrographs composed of 30 frames each in TIFF format] | Podgorski JM | 2.0 TB | 2.66 Å |
| 2022-01-24 |  |
Structural Insights of Transcriptionally Active, Full-Length Androgen Receptor Coactivator Complexes [multiple data sets in MRC and TIFF formats] | Yu X, Yi P [Pubmed: 32668201] [DOI: 10.1016/j.molcel.2020.06.031] |
2.0 TB | 20.0 Å |
| 2021-11-16 |  |
cryoEM of Mycobacterium tuberculosis WT RNAP holo enzyme with WhiB7 transcription factor bound to the Mtb WhiB7 promoter [8494 multi-frame micrographs composed of 50 frames each in TIFF format] | Lilic M, Darst SA, Campbell EA [Pubmed: 34171296] [DOI: 10.1016/j.molcel.2021.05.017] |
2.0 TB | 2.94 Å |
| 2020-08-18 |  |
Cryo-EM structure of Human NatB with an Alpha-Synuclein peptide and CoA conjugate [5281 multi-frame micrographs composed of 35 frames each in TIFF format] | Deng S, Pan B, Gottlieb L, Petersson EJ, Marmorstein R [Pubmed: 32885784] [DOI: 10.7554/eLife.57491] |
2.0 TB | 3.46 Å |
| 2020-07-21 |  |
TASK2 in MSP1D1 lipid nanodisc at pH6.5 [3024 multi-frame micrographs composed of 50 frames each in TIFF format] | Li B, Brohawn SG [Pubmed: 32999458] [DOI: 10.1038/s41586-020-2770-2] |
2.0 TB | 3.45 Å |
| 2023-06-30 |  |
E. coli 50S ribosome bound to tiamulin and VS1 [multiple data sets in MRC and TIFF formats] | Pellegrino J, Seiple IB, Fraser JS, Lee DJ | 2.0 TB | 2.13 Å |
| 2022-12-06 |  |
Micrographs of ex vivo AA amyloid from renal tissue of a short hair cat deceased in a shelter [multiple data sets in TIFF format] | Schulte T, Chaves-Sanjuan A, Ricagno S [Pubmed: 36396658] [DOI: 10.1038/s41467-022-34743-2] |
2.0 TB | 3.3 Å |
| 2022-07-08 |  |
Minimal protein-only RNase P structure reveals insights into tRNA precursor recognition and catalysis [2370 multi-frame micrographs composed of 48 frames each in TIFF format] | Teramoto T, Koyasu T, Adachi N, Kawasaki M, Moriya T, Numata T, Senda T, Kakuta Y [Pubmed: 34339732] [DOI: 10.1016/j.jbc.2021.101028] |
2.0 TB | 3.62 Å |
| 2024-02-09 |  |
5-HT2B receptor bound to LSD in complex with heterotrimeric mini-Gq protein obtained by cryo-electron microscopy (cryoEM) [3916 multi-frame micrographs composed of 57 frames each in TIFF format] | Barros-Alvarez X [Pubmed: 36087581] [DOI: 10.1016/j.neuron.2022.08.006] |
2.0 TB | 2.9 Å |
| 2020-10-12 |  |
Cryo electron microscopy of SARS-CoV-2 spike in prefusion state [3207 multi-frame micrographs composed of 30 frames each in MRC format] | Carazo JM [Pubmed: 33063791] [DOI: 10.1107/S2052252520012725] |
2.1 TB | 3.0 - 3.3 Å |
| 2023-03-14 |  |
LRRC8A-BRIL(T48D):C Heteromer in GDN [multiple data sets in TIFF and MRCS formats] | Kern DM, Brohawn SG [Pubmed: 36928458] [DOI: 10.1038/s41594-023-00944-6] |
2.1 TB | 3.1 - 4.32 Å |
| 2020-08-19 |  |
Cryo-EM structure of SARS-CoV-2 Spike Proteins on intact virions [7982 multi-frame micrographs composed of 48 frames each in TIFF format] | Ke Z, Qu K, Cortese M, Zila V, Nakane T, Xiong X, Scheres SHW, Briggs JAG [Pubmed: 32805734] [DOI: 10.1038/s41586-020-2665-2] |
2.1 TB | 3.5 - 4.1 Å |
| 2023-12-11 |  |
SpCas9 bound to 14 nucleotide complementary DNA substrate [multiple data sets in TIFF and DM4 formats] | Pacesa M, Loeff L, Querques I, Muckenfuss LM, Sawicka M, Jinek M [Pubmed: 36002571] [DOI: 10.1038/s41586-022-05114-0] |
2.1 TB | 3.49 Å |
| 2021-05-17 |  |
Single-Particle CryoEM of Human Apoferritin Light Chain Vitrified Using Back-it-up [multiple data sets in MRCS and MRC formats] | Tan YZ, Rubinstein JL [Pubmed: 33135680] [DOI: 10.1107/S2059798320012474] |
2.1 TB | 2.0 Å |
| 2022-05-31 |  |
Cryo-EM structure of human NKCC1 K289NA492E bound with bumetanide [4273 multi-frame micrographs composed of 40 frames each in TIFF format] | Zhao YZ [Pubmed: 35585053] [DOI: 10.1038/s41467-022-30407-3] |
2.1 TB | 3.6 Å |
| 2024-02-13 |  |
Cryo-EM structure of the chain-elongating E3 ubiquitin ligase UBR5 [multiple data sets in MRC format] | Hodáková Z, Grishkovskaya I, Haselbach D, Kotisch H [Pubmed: 37409633] [DOI: 10.15252/embj.2022113348] |
2.1 TB | 3.0 Å |
| 2020-11-18 |  |
Cryo-EM structure of mouse TRPV3 in a nanodisc [1818 multi-frame micrographs composed of 60 frames each in TIFF format] | Shimada H, Kusakizako T, Dung Nguyen TH, Nishizawa T, Hino T, Tominaga M, Nureki O [Pubmed: 32572254] [DOI: 10.1038/s41594-020-0439-z] |
2.1 TB | 3.3 Å |
| 2023-05-23 |  |
Archaeal DNA ligase and heterotrimeric PCNA with non-ligatable nicked DNA [3014 multi-frame micrographs composed of 37 frames each in TIFF format] | Sverzhinsky A, Pascal JM [Pubmed: 34838188] [DOI: 10.1016/j.str.2021.11.002] |
2.1 TB | 4.16 Å |
| 2023-06-29 |  |
E. coli 50S ribosome bound to streptogramin A analog 3146 [multiple data sets in MRC and TIFF formats] | Pellegrino J, Seiple IB, Fraser JS, Lee DJ | 2.1 TB | 2.38 Å |
| 2022-01-14 |  |
High resolution 3D imaging of liver subcellular architecture and its link to metabolic function [multiple data sets in TIFF format] | Parlakgul G, Hotamisligil GS [Pubmed: 35264794] [DOI: 10.1038/s41586-022-04488-5] |
2.1 TB | — |
| 2022-06-14 |  |
Transmission electron micrographs of mouse RNF213 in a chemically-stabilized complex with human UBE2L3 [4591 multi-frame micrographs composed of 40 frames each in TIFF format] | Ahel J, Weis F, Clausen T | 2.1 TB | 3.5 Å |
| 2022-06-07 |  |
Cryo-EM structure of the gastric proton pump complexed with revaprazan [multiple data sets in TIFF format] | Abe K, Tanaka S, Morita M, Yamagishi T [Pubmed: 35604136] [DOI: 10.1021/acs.jmedchem.2c00338] |
2.1 TB | 2.76 Å |
| 2022-07-12 |  |
CryoEM data of PLA2R at pH 6.2 with both 0 and 30 degree tilts. [multiple data sets in TIFF format] | Lockhart-Cairns MP [Pubmed: 35858348] [DOI: 10.1073/pnas.2202209119] |
2.1 TB | 3.4 Å |
