Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2021-11-26 |  |
Higher-order structures of the foot-and-mouth disease virus RNA-dependent RNA polymerase required for dynamic inter-molecular interactions involved in viral genome replication [5417 multi-frame micrographs composed of 79 frames each in MRC format] | Loundras EA, Streetley J, Herod MR, Thompson RF, Harris M, Bhella D, Stonehouse NJ [Pubmed: 35039618] [DOI: 10.1038/s42003-021-02989-z] |
8.1 TB | 7.3 Å |
| 2021-02-19 |  |
CryoEM structure of the LCD of hnRNPA2 amyloid-like fibrils [3937 multi-frame micrographs composed of 2 frames each in MRC format] | Lu J, Cao Q, Hughes MP, Sawaya MR, Boyer DR, Cascio D, Eisenberg DS [Pubmed: 32796831] [DOI: 10.1038/s41467-020-17905-y] |
1.2 TB | 3.1 Å |
| 2017-08-23 |  |
Conformational Landscape of the p28-Bound Human Proteasome Regulatory Particle [stack of 117471 particles in MRCS format] | Lu Y, Wu J, Dong Y, Chen S, Sun S, Ma YB, Ouyang Q, Finley D, Kirschner MW, Mao Y [Pubmed: 28689658] [DOI: 10.1016/j.molcel.2017.06.007] |
70.0 GB | 4.5 - 8.9 Å |
| 2022-07-18 |  |
Cryo-EM structures of monomeric and dimeric human somatic angiotensin I-converting enzyme (apo form) [7689 multi-frame micrographs composed of 40 frames each in TIFF format] | Lubbe L, Sewell BT, Sturrock ED [Pubmed: 35818993] [DOI: 10.15252/embj.2021110550] |
3.8 TB | 3.63 - 4.34 Å |
| 2023-05-12 |  |
Quantification of gallium cryo-FIB milling damage in biological lamella [multiple data sets in MRC format] | Lucas BA, Grigorieff N [Pubmed: 37216561] [DOI: 10.1073/pnas.2301852120] |
8.1 GB | — |
| 2021-07-07 |  |
Locating Macromolecular Assemblies in Cells by 2D Template Matching with cisTEM [multiple data sets in MRC format] | Lucas BA, Himes BA, Xue L, Grant T, Mahamid J, Grigorieff N [Pubmed: 34114559] [DOI: 10.7554/eLife.68946] |
11.0 GB | 20.0 Å |
| 2021-11-15 |  |
Locating Macromolecular Assemblies in Cells by 2D Template Matching with cisTEM [multiple data sets in MRC format] | Lucas BA, Himes BA, Xue L, Grant T, Mahamid J, Grigorieff N [Pubmed: 33542511] [DOI: 10.1038/s41592-020-01054-7] |
67.8 GB | 3.4 Å |
| 2022-05-03 |  |
In situ single particle classification reveals distinct 60S maturation intermediates in cells [multiple data sets in MRC format] | Lucas BA, Zhang K, Loerch S, Grigorieff N [DOI: 10.1101/2022.04.10.487797] |
10.5 GB | — |
| 2023-10-20 |  |
Regularisation by denoising lowers the size barrier of cryo-EM structure determination [multiple data sets in MRC and MRCS formats] | Lövestam S | 81.5 GB | 2.0 Å |
| 2021-03-05 |  |
Cryo-EM of Multiple System Atrophy seeded assembly of alpha-synuclein filaments [multiple data sets in TIFF and MRCS formats] | Lövestam S, Goedert M, Scheres S [Pubmed: 33548114] [DOI: 10.1002/2211-5463.13110] |
1.1 TB | 3.18 - 4.23 Å |
| 2022-02-24 |  |
Tutorial for high-throughput cryo-EM structure determination of amyloids: Dataset 1 [331 multi-frame micrographs composed of 34 frames each in TIFF format] | Lövestam S, Scheres SHW [Pubmed: 35244536] [DOI: 10.7554/eLife.76494] |
476.1 GB | 2.07 Å |
| 2022-03-08 |  |
Tutorial for high-throughput cryo-EM structure determination of amyloids: Dataset 2 [4000 multi-frame micrographs composed of 34 frames each in TIFF format] | Lövestam S, Scheres SHW [Pubmed: 35244536] [DOI: 10.7554/eLife.76494] |
1.5 TB | 1.92 Å |
| 2022-02-22 |  |
Tutorial for high-throughput cryo-EM structure determination of amyloids: Dataset 3 [1259 multi-frame micrographs composed of 34 frames each in TIFF format] | Lövestam S, Scheres SHW [Pubmed: 35244536] [DOI: 10.7554/eLife.76494] |
839.8 GB | 3.13 - 3.23 Å |
| 2024-01-11 |  |
Cryo-ET detects bundled triple helices but not ladders in meiotic budding yeast [multiple data sets in MRC format] | Ma OX, Chong WG, Lee JKE, Cai S, Siebert CA, Howe A, Zhang P, Shi J, Surana U, Gan L [Pubmed: 35421110] [DOI: 10.1371/journal.pone.0266035] |
291.6 GB | 33.0 Å |
| 2023-01-30 |  |
Single particle cryo-EM dataset for E. coli MlaFEDB bound to MlaC [multiple data sets in MRC and TIFF formats] | MacRae MR, Coudray N, Bhabha G, Ekiert DC [Pubmed: 37100290] [DOI: 10.1016/j.jbc.2023.104744] |
5.0 TB | 6.6 Å |
| 2021-02-19 |  |
Negative-stained transmission electron microscopy of the nucleosome remodelling and deacetylase complex purified from murine erythroleukemia cells. [1323 micrographs in MRC format] | Mackay JP, Landsberg MJ, Jackman MJ [Pubmed: 33264611] [DOI: 10.1016/j.celrep.2020.108450] |
82.7 GB | 14.0 Å |
| 2021-02-12 |  |
Negative-stained transmission electron microscopy of the nucleosome and deacetylase complex purified from murine erythroleukemia cells. [400 micrographs in MRC format] | Mackay JP, Landsberg MJ, Jackman MJ [Pubmed: 33264611] [DOI: 10.1016/j.celrep.2020.108450] |
25.0 GB | 14.0 Å |
| 2021-02-12 |  |
Negative-stained transmission electron microscopy of the MTA-HDAC-MBD core complex purified from EXPI cells [325 micrographs in MRC format] | Mackay JP, Landsberg MJ, Jackman MJ [Pubmed: 33264611] [DOI: 10.1016/j.celrep.2020.108450] |
20.3 GB | 29.0 Å |
| 2023-07-14 |  |
Mouse apoferritin, Dataset B taken with CRYO ARM 300 [1246 multi-frame micrographs composed of 50 frames each in TIFF format] | Maki-Yonekura S, Kawakami K, Takaba K, Hamaguchi T, Yonekura K [Pubmed: 37258702] [DOI: 10.1038/s42004-023-00900-x] |
384.7 GB | 1.49 Å |
| 2023-07-14 |  |
Mouse apoferritin, Dataset A taken with CRYO ARM 300 [9096 multi-frame micrographs composed of 40 frames each in TIFF format] | Maki-Yonekura S, Kawakami K, Takaba K, Hamaguchi T, Yonekura K [Pubmed: 37258702] [DOI: 10.1038/s42004-023-00900-x] |
1.5 TB | 1.19 Å |
| 2020-12-18 |  |
Cryo electron micrographs of digitonin-solubilized, amphipol-stabilized, sucrose-gradient-purified V. radiata mitochondrial membranes - mixed fraction containing CI*, CIII2 and SC III2+IV [9815 multi-frame micrographs composed of 118 frames each in TIFF format] | Maldonado M, Guo F, Letts JA [Pubmed: 33463523] [DOI: 10.7554/eLife.62047] |
6.7 TB | 3.2 - 3.9 Å |
| 2023-02-01 |  |
Single particle cryogenic electron micrographs of respiratory supercomplex I+III2 from Vigna radiata [multiple data sets in TIFF format] | Maldonado M, Letts JA [Pubmed: 36581760] [DOI: 10.1038/s41477-022-01306-8] |
16.4 TB | 3.2 Å |
| 2022-04-25 |  |
Cryo-EM data used for the determination of LACV-L in transcription capped primer cleavage state [3270 multi-frame micrographs composed of 60 frames each in TIFF format] | Malet H, Arragain B, Durieux Trouilleton Q, Cusack S, Schoehn G [Pubmed: 35173159] [DOI: 10.1038/s41467-022-28428-z] |
934.6 GB | 3.9 Å |
| 2022-04-29 |  |
Cryo electron microscopy of wild-type hyaluronan synthase with UDP [3062 multi-frame micrographs composed of 40 frames each in TIFF format] | Maloney FP, Kuklewicz J, Zimmer J [Pubmed: 35355017] [DOI: 10.1038/s41586-022-04534-2] |
818.1 GB | 3.1 Å |
| 2022-06-22 |  |
Cryo electron microscopy of inactive hyaluronan synthase with UDP-GlcNAc [9026 multi-frame micrographs composed of 40 frames each in TIFF format] | Maloney FP, Kuklewicz J, Zimmer J [Pubmed: 35355017] [DOI: 10.1038/s41586-022-04534-2] |
2.3 TB | 2.7 - 3.1 Å |
