EMPIAR-11534 - Mouse apoferritin, Dataset A taken with CRYO ARM 300 [9096 multi-frame micrographs composed of 40 frames each in TIFF format]

EMPIAR-11534

Mouse apoferritin, Dataset A taken with CRYO ARM 300 [9096 multi-frame micrographs composed of 40 frames each in TIFF format]

Publication:

Measurement of charges and chemical bonding in a cryo-EM structure

Maki-Yonekura S, Kawakami K, Takaba K, Hamaguchi T, Yonekura K

Communications chemistry 6 (2023)

PMID: 37258702

DOI: 10.1038/s42004-023-00900-x

Related EMDB entry:

EMD-35984

Deposited:

2023-04-22

Released:

2023-07-14

Last modified:

2023-07-14

Imageset size:

1.51 TB

Imageset DOI:

10.6019/EMPIAR-11534

Experimental metadata:

Download xml json

Contains:

micrographs - multiframe

Image Sets

1. Unaligned movie frame, no gain reference correction

Category:

micrographs - multiframe

Image format:

TIFF

No. of images or tilt series:

9096

Image size:

(11520, 8184)

Pixel type:

UNSIGNED BYTE

Pixel spacing:

(0.2475, 0.2475)

Details:

---

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Citations

AlignPCA-2D: PCA-reduced Euclidean vector alignment for 2D classification in cryo-EM.

Ramírez-Aportela E, Zarrabeitia OL, Fonseca YC, Ceska T, Subramaniam S, Carazo JM, Sorzano COS. (2026)

A variational framework with composite sparse regularization for cryo-electron tomography reconstruction.

Yu C, Xu Z, Zeng Q, Wan X, El-Messiry H, Zhang F, Han R. (2026)

Helical reconstruction of amyloids in cryoSPARC.

Schaefer JH, O'Neill RT, Donnelly JP, Powers ET, Kelly JW, Lander GC. (2026)

An unattended image-processing pipeline for on-the-fly quality assessment and 3D exploration in cryo-EM.

Marchán Torres D, Conesa P, Garcia A, Iceta M, Broche L, Gragera M, Linares R, Kwong HS, Chichón FJ, Svensson O, Arranz R, Effantin G, Kandiah E, Carazo JM, Sorzano COS. (2026)

CryoFSL: an annotation-efficient, few-shot learning framework for robust protein particle picking in cryo-electron microscopy micrographs.

Poudel B, Gyawali R, Dhakal A, Cheng J, Xu D. (2026)

prismPYP: Power-spectrum and image domain learning for self-supervised micrograph evaluation.

He L, Bartesaghi A. (2026)

CryoSIP: unleashing protein high-resolution Cryo-EM via semantic-instance collaborative picking.

Deng Y, Wang S, Xiang M, Li Y, Zhuo L, Cao D, Fu X, Zou Q. (2026)

Unbend, correction of local beam-induced sample motion in cryo-EM images using a 3D spline model.

Kong L, Zottig X, Elferich J, Grigorieff N. (2026)

CryoVirusDB: An Annotated Dataset for AI-Based Virus Particle Identification in Cryo-EM Micrographs.

Gyawali R, Dhakal A, Wang L, Cheng J. (2026)

CryoWriter: a robotic solution for improved Cryo-EM grid preparation.

Kv C, Ekundayo B, Di Fabrizio M, Mohammed I, Radecke J, Stahlberg H, Kube M. (2026)