Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2024-02-13 |  |
Cryo-EM structure of the chain-elongating E3 ubiquitin ligase UBR5 [multiple data sets in MRC format] | Hodáková Z, Grishkovskaya I, Haselbach D, Kotisch H [Pubmed: 37409633] [DOI: 10.15252/embj.2022113348] |
2.1 TB | 3.0 Å |
| 2019-11-15 |  |
Cryo-EM structure of the adenosine A2A receptor coupled to an engineered heterotrimeric G protein [multiple data sets in TIFF and MRCS formats] | Garcia-Nafria J, Lee Y, Bai X, Carpenter B, Tate CG [Pubmed: 29726815] [DOI: 10.7554/eLife.35946] |
1.1 TB | 4.11 Å |
| 2018-01-22 |  |
Cryo-EM structure of the TMEM16A in Nanodisc [stack of 3149 particles in MRCS format] | Dang S, Cheng Y [Pubmed: 29236684] [DOI: 10.1038/nature25024] |
226.7 GB | 3.8 Å |
| 2018-01-22 |  |
Cryo-EM structure of the TMEM16A in LMNG [multiple data sets in MRCS format] | Dang S, Cheng Y [Pubmed: 29236684] [DOI: 10.1038/nature25024] |
244.2 GB | 3.8 Å |
| 2021-10-01 |  |
Cryo-EM structure of the SpCas9 delta4CE Ternary Complex [2570 multi-frame micrographs composed of 60 frames each in TIFF format] | Laughlin TG, Shams A, Savage DF [Pubmed: 34580310] [DOI: 10.1038/s41467-021-25992-8] |
1.5 TB | 6.2 Å |
| 2023-04-13 |  |
Cryo-EM structure of the SARS-CoV-2 HR1HR2 fusion core complex with extended HR2 [18846 multi-frame micrographs composed of 40 frames each in TIFF format] | Yang K, Brunger AT [Pubmed: 36122200] [DOI: 10.1073/pnas.2210990119] |
4.6 TB | 2.22 Å |
| 2023-01-19 |  |
Cryo-EM structure of the RhlR-PqsE complex from Pseudomonas aeruginosa [multiple data sets in TIFF and MRCS formats] | Feathers JR, Fromme JC, Paczkowski JE [Pubmed: 36379213] [DOI: 10.1016/j.str.2022.10.008] |
2.0 TB | 3.74 - 4.1 Å |
| 2015-06-17 |  |
Cryo-EM structure of the Plasmodium falciparum 80S ribosome bound to the anti-protozoan drug emetine [multiple data sets in MRC format] | Wong W, Bai XC, Brown A, Fernandez IS, Hanssen E, Condron M, Tan YH, Baum J, Scheres SHW [Pubmed: 24913268] [DOI: 10.7554/eLife.03080] |
1.2 TB | 3.2 Å |
| 2022-07-29 |  |
Cryo-EM structure of the GOLD-domain seven-transmembrane protein TMEM87A [7060 multi-frame micrographs composed of 50 frames each in TIFF format] | Hoel CM, Zhang L, Brohawn SG [Pubmed: 36373655] [DOI: 10.7554/eLife.81704] |
4.7 TB | 4.74 Å |
| 2021-01-27 |  |
Cryo-EM structure of the Cas12f1-sgRNA-target DNA complex [2848 multi-frame micrographs composed of 48 frames each in TIFF format] | Takeda NS, Nakagawa R, Okazaki S, Hirano H, Kobayashi K, Kusakizako T, Nishizawa T, Yamashita K, Nishimasu H, Nureki O [Pubmed: 33333018] [DOI: 10.1016/j.molcel.2020.11.035] |
649.5 GB | 3.3 Å |
| 2022-01-18 |  |
Cryo-EM structure of the A.baumannii MlaBDEF complex bound to AppNHp [2557 micrographs in MRC format] | Mann D, Bergeron JRC [Pubmed: 34188171] [DOI: 10.1038/s42003-021-02318-4] |
135.6 GB | 3.9 Å |
| 2022-11-14 |  |
Cryo-EM structure of streptavidin on ultraflat graphene film [2371 multi-frame micrographs composed of 32 frames each in MRCS format] | Zheng LM, Liu N, Wang HW, Peng HL | 685.7 GB | 2.2 Å |
| 2023-04-25 |  |
Cryo-EM structure of pre-consensus elemental paused elongation complex [4419 multi-frame micrographs composed of 50 frames each in TIFF format] | Kang JY, Mishanina TV, Bao Y, Chen J, Llewellyn E, Liu J, Darst SA, Landick R [Pubmed: 36795753] [DOI: 10.1073/pnas.2215945120] |
1.9 TB | 3.2 Å |
| 2023-05-23 |  |
Cryo-EM structure of pioneer factor Cbf1 bound to the nucleosome [6339 multi-frame micrographs composed of 51 frames each in TIFF format] | Eek P, Tan S [Pubmed: 36996811] [DOI: 10.1016/j.molcel.2023.03.006] |
4.1 TB | 3.2 Å |
| 2019-05-01 |  |
Cryo-EM structure of phosphodiesterase 6 reveals insights into the allosteric regulation of type I phosphodiesterases [3134 micrographs in MRC format] | Gulati S, Palczewski K, Engel A, Stahlberg H, Kovacik L [Pubmed: 30820458] [DOI: 10.1126/sciadv.aav4322] |
166.3 GB | 3.4 Å |
| 2022-10-17 |  |
Cryo-EM structure of non gastric H,K-ATPase alpha2 mutants [multiple data sets in TIFF format] | Abe K, Nakanishi H [Pubmed: 36085139] [DOI: 10.1038/s41467-022-32793-0] |
3.8 TB | 2.8 - 3.4 Å |
| 2024-02-06 |  |
Cryo-EM structure of neutralizing antibody 1-57 in complex with prefusion SARS-CoV-2 spike glycoprotein [2735 multi-frame micrographs composed of 50 frames each in TIFF format] | Cerutti G, Rapp M, Guo Y, Bahna F, Bimela J, Reddem ER, Yu J, Wang P, Liu L, Huang Y, Ho DD, Kwong PD, Sheng Z, Shapiro L [Pubmed: 34111408] [DOI: 10.1016/j.str.2021.05.014] |
746.5 GB | 3.42 Å |
| 2019-12-04 |  |
Cryo-EM structure of multidrug efflux pump MexAB-OprM [8722 multi-frame micrographs composed of 32 frames each in MRC format] | Tsutsumi K, Yonehara R, Ishizaka-Ikeda E, Miyazaki N, Maeda S, Iwasaki K, Nakagawa A, Yamashita E [Pubmed: 30944318] [DOI: 10.1038/s41467-019-09463-9] |
3.5 TB | 3.64 - 3.76 Å |
| 2018-10-25 |  |
Cryo-EM structure of mouse heavy-chain apoferritin at 1.62 A [1647 multi-frame micrographs composed of 59 frames each in MRC format] | Danev R, Yanagisawa H, Kikkawa M [Pubmed: 31078399] [DOI: 10.1016/j.tibs.2019.04.008] |
1.2 TB | 1.62 Å |
| 2024-03-26 |  |
Cryo-EM structure of mouse heavy-chain apoferritin [9846 multi-frame micrographs composed of 357 frames each in EER format] | Nazarov S.U., Myasnikov A.G., Mohammed I. | 963.4 GB | 1.09 Å |
| 2020-11-18 |  |
Cryo-EM structure of mouse TRPV3 in a nanodisc [1818 multi-frame micrographs composed of 60 frames each in TIFF format] | Shimada H, Kusakizako T, Dung Nguyen TH, Nishizawa T, Hino T, Tominaga M, Nureki O [Pubmed: 32572254] [DOI: 10.1038/s41594-020-0439-z] |
2.1 TB | 3.3 Å |
| 2020-11-11 |  |
Cryo-EM structure of immunodominant protein P1 from human pathogen Mycoplasma pneumoniae on graphene oxide grid [multiple data sets in TIFF format] | Vizarraga D, Kawamoto A, Matsumoto U, Illanes R, Pérez-Luque R, Martín J, Mazzolini R, Bierge P, Pich OQ, Espasa M, Sanfeliu I, Esperalba J, Fernández-Huerta M, Scheffer MP, Pinyol J, Frangakis AS, Lluch-Senar M, Mori S, Shibayama K, Kenri T, Kato T, Namba K, Fita I, Miyata M, Aparicio D [Pubmed: 33057023] [DOI: 10.1038/s41467-020-18777-y] |
8.0 TB | 2.9 Å |
| 2021-06-04 |  |
Cryo-EM structure of human rod CNGA1 channel in apo-state [stack of 274333 particles in MRCS format] | Xue J, Han Y, Zeng W, Wang Y, Jiang Y [Pubmed: 33651975] [DOI: 10.1016/j.neuron.2021.02.007] |
84.9 GB | 2.6 Å |
| 2022-04-22 |  |
Cryo-EM structure of human U2 snRNP after ATP-dependent remodeling [multiple data sets in TIFF and MRCS formats] | Tholen J, Galej WP, Weis F [Pubmed: 34822310] [DOI: 10.1126/science.abm4245] |
1.5 TB | 2.15 Å |
| 2024-02-28 |  |
Cryo-EM structure of human TFIIIC bound and unbound to tRNA gene [multiple data sets in TIFF and MRCS formats] | Seifert-Davila W, Girbig M, Hauptmann L, Hoffmann T, Eustermann S, Müller CW [Pubmed: 37418517] [DOI: 10.1126/sciadv.adh2019] |
3.8 TB | 3.2 - 3.8 Å |
