EMPIAR-10028 - Cryo-EM structure of the Plasmodium falciparum 80S ribosome bound to the anti-protozoan drug emetine [multiple data sets in MRC format]

EMPIAR-10028

Cryo-EM structure of the Plasmodium falciparum 80S ribosome bound to the anti-protozoan drug emetine [multiple data sets in MRC format]

Publication:

Cryo-EM structure of the Plasmodium falciparum 80S ribosome bound to the anti-protozoan drug emetine

Wong W, Bai XC, Brown A, Fernandez IS, Hanssen E, Condron M, Tan YH, Baum J, Scheres SH

eLife 3 (2014)

PMID: 24913268

DOI: 10.7554/elife.03080

Related EMDB entry:

EMD-2660

Deposited:

2015-05-29

Released:

2015-06-17

Last modified:

2023-03-28

Imageset size:

1.17 TB

Imageset DOI:

10.6019/EMPIAR-10028

Experimental metadata:

Download xml json

Contains:

micrographs - multiframe
micrographs - single frame
picked particles - multiframe - processed

Image Sets

1. Unaligned multi-frame micrographs

Category:

micrographs - multiframe

Image format:

MRC

No. of images or tilt series:

1081

Image size:

(4096, 4096)

Pixel type:

32 BIT FLOAT

Pixel spacing:

(1.34, 1.34)

Details:

Micrographs are split into two sub-directories: Micrographs_part1 and Micrographs_part2. Each of these directories contains BOTH the unaligned frames (xxx_movie.mrcs) and the frame-averaged micrographs (600.mrc). These directories also contain the ctffind3 log files and the autopick star files.

Files:

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2. Frame averaged micrographs

Category:

micrographs - single frame

Image format:

MRC

No. of images or tilt series:

1081

Image size:

(4096, 4096)

Pixel type:

32 BIT FLOAT

Pixel spacing:

(1.34, 1.34)

Details:

Files:

Archives and downloads the selected files into an uncompressed zip file.

We recommend using rsync, aspera, globus, etc.

Download a list of selected files.

It is possible to download files by specifying the file list with rsync command, etc.

rsync -av --files-from=(path-to-filelist) rsync://empiar.pdbj.org/empiar/archive (path-to-destination)

3. Processed shiny particles

Category:

picked particles - multiframe - processed

Image format:

MRC

No. of images or tilt series:

105247

Image size:

(360, 360)

Pixel type:

32 BIT FLOAT

Pixel spacing:

(1.34, 1.34)

Details:

Particle images are organized in two sub-directories - MRC_0601 and MRC_1901. Particle images are in MRCS image stacks - one each corresponding to the micrograph from which they were picked. The text file shiny_2sets.star describes the picking of the particles from the micrographs.

Files:

Archives and downloads the selected files into an uncompressed zip file.

We recommend using rsync, aspera, globus, etc.

Download a list of selected files.

It is possible to download files by specifying the file list with rsync command, etc.

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Browse All Files

Files:

Archives and downloads the selected files into an uncompressed zip file.

We recommend using rsync, aspera, globus, etc.

Download a list of selected files.

It is possible to download files by specifying the file list with rsync command, etc.

rsync -av --files-from=(path-to-filelist) rsync://empiar.pdbj.org/empiar/archive (path-to-destination)

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