Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2023-06-20 |  |
Cryo-EPty SPA at CSA of 3.26 mrad [22 micrographs in MRC format] | Pei X, Zhou L, Huang C, Boyce M, Kim JS, Liberti E, Hu Y, Sasaki T, Nellist PD, Zhang P, Stuart DI, Kirkland AI, Wang P [Pubmed: 37230988] [DOI: 10.1038/s41467-023-38268-0] |
2.1 GB | 32.9 Å |
| 2023-06-20 |  |
Cryo-EPty SPA at CSA of 1.03 mrad [29 micrographs in MRC format] | Pei X, Zhou L, Huang C, Boyce M, Kim JS, Liberti E, Hu Y, Sasaki T, Nellist PD, Zhang P, Stuart DI, Kirkland AI, Wang P [Pubmed: 37230988] [DOI: 10.1038/s41467-023-38268-0] |
262.0 MB | 37.2 Å |
| 2023-08-18 |  |
Cryo-EM study on a single, highly heterogeneous cellular fraction with megadalton complexes derived from Chaetomium thermophilum [522 multi-frame micrographs composed of 30 frames each in MRC format] | Semchonok DA, Kyrilis FL, Hamdi F, Kastritis PL [DOI: 10.2139/ssrn.4211492] |
489.4 GB | 3.46 - 3.74 Å |
| 2023-01-16 |  |
Cryo-EM structures of the β3 adrenergic receptor bound to solabegron and isoproterenol [multiple data sets in TIFF format] | Nagiri C, Kobayashi K, Tomita A, Kato M, Yamashita K, Nishizawa T, Inoue A, Shihoya W, Nureki O [Pubmed: 35489202] [DOI: 10.1016/j.bbrc.2022.04.065] |
2.5 TB | 3.3 - 3.9 Å |
| 2022-11-14 |  |
Cryo-EM structures of the translocational binary toxin complex CDTa-bound CDTb-pore [11284 multi-frame micrographs composed of 84 frames each in TIFF format] | Kawamoto A, Yamada T, Yoshida T, Sato Y, Kato T, Tsuge H [Pubmed: 36253419] [DOI: 10.1038/s41467-022-33888-4] |
3.3 TB | 2.56 - 2.64 Å |
| 2020-09-11 |  |
Cryo-EM structures of remodeler-nucleosome intermediates suggest allosteric control through the nucleosome [719 multi-frame micrographs composed of 30 frames each in MRCS format] | Armache J-P, Gamarra N, Johnson SL, Leonard JD, Wu S, Narlikar G, Cheng Y [Pubmed: 31210637] [DOI: 10.7554/eLife.46057] |
1.4 TB | 3.39 Å |
| 2022-07-18 |  |
Cryo-EM structures of monomeric and dimeric human somatic angiotensin I-converting enzyme (apo form) [7689 multi-frame micrographs composed of 40 frames each in TIFF format] | Lubbe L, Sewell BT, Sturrock ED [Pubmed: 35818993] [DOI: 10.15252/embj.2021110550] |
3.8 TB | 3.63 - 4.34 Å |
| 2022-08-12 |  |
Cryo-EM structures of human V-ATPase [40113 multi-frame micrographs composed of 40 frames each in TIFF format] | Wang L, Wu H, Fu TM [Pubmed: 33065002] [DOI: 10.1016/j.molcel.2020.09.029] |
8.4 TB | 2.9 - 3.6 Å |
| 2021-05-07 |  |
Cryo-EM structures of human RNA Polymerase III [multiple data sets in TIFF and MRCS formats] | Girbig M, Misiaszek AD, Vorlaender MK, Mueller CW [Pubmed: 33558764] [DOI: 10.1038/s41594-020-00555-5] |
3.3 TB | 2.8 - 3.4 Å |
| 2019-08-30 |  |
Cryo-EM structures of human P4-ATPase flippase [multiple data sets in TIFF format] | Hiraizumi M, Yamashita K, Nishizawa T, Nureki O [Pubmed: 31416931] [DOI: 10.1126/science.aay3353] |
11.0 TB | 2.63 - 3.42 Å |
| 2020-08-28 |  |
Cryo-EM structures of four polymorphic TDP-43 amyloid cores [multiple data sets in MRC format] | Cao Q, Boyer DR, Sawaya MR, Ge P, Eisenberg DS [Pubmed: 31235914] [DOI: 10.1038/s41594-019-0248-4] |
4.5 TB | 3.3 - 3.8 Å |
| 2021-08-06 |  |
Cryo-EM structures of engineered active bc1-cbb3 type CIII2CIV super-complexes and electronic communication between the complexes [multiple data sets in MRCS, TIFF and MRC formats] | Steimle S, VanEeuwen T, Ozturk Y, Kim HJ, Braitbard M, Selamoglu N, Garcia BA, Schneidman-Duhovny D, Murakami K, Daldal F [Pubmed: 33568648] [DOI: 10.1038/s41467-021-21051-4] |
12.4 TB | 3.3 - 7.2 Å |
| 2020-07-30 |  |
Cryo-EM structures of calcium homeostasis modulator (CALHM) channels [multiple data sets in TIFF format] | Demura K, Kusakizako T, Shihoya W, Hiraizumi M, Shimada H, Yamashita K, Nishizawa T, Nureki O [Pubmed: 32832629] [DOI: 10.1126/sciadv.aba8105] |
6.8 TB | 2.66 - 3.6 Å |
| 2022-01-24 |  |
Cryo-EM structures of TTYH2 in the abscence of calcium [multiple data sets in TIFF format] | Li B, Hoel CM, Brohawn SG [Pubmed: 34824283] [DOI: 10.1038/s41467-021-27283-8] |
4.8 TB | 3.89 - 3.96 Å |
| 2022-11-14 |  |
Cryo-EM structures of Ib-pore and Ia-bound Ib-pore [multiple data sets in TIFF format] | Yamada T, Yoshida T, Kawamoto A, Tsuge H [Pubmed: 32123390] [DOI: 10.1038/s41594-020-0388-6] |
8.0 TB | 2.8 - 2.9 Å |
| 2021-02-10 |  |
Cryo-EM structures of Helicobacter pylori vacuolating cytotoxin A (VacA) oligomeric assemblies [10056 multi-frame micrographs composed of 30 frames each in MRC format] | Zhang K, Zhang H, Li S, Pintilie GD, Mou TC, Gao Y, Zhang Q, van den Bedem H, Schmid MF, Au SWN, Chiu W [Pubmed: 30894496] [DOI: 10.1073/pnas.1821959116] |
1.1 TB | 3.2 - 9.9 Å |
| 2021-10-05 |  |
Cryo-EM structures of E. coli cytochrome bo3 in MSP Nanodiscs [3446 multi-frame micrographs composed of 50 frames each in TIFF format] | Vallese F [Pubmed: 34417297] [DOI: 10.1073/pnas.2106750118] |
851.4 GB | 2.19 Å |
| 2016-09-22 |  |
Cryo-EM structure of the yeast U4/U6.U5 tri-snRNP at 3.7 Angstrom (particle images) [stack of 473827 particles in MRC format] | Nguyen TH, Galej WP, Bai XC, Oubridge C, Newman AJ, Scheres SH, Nagai K [Pubmed: 26829225] [DOI: 10.1038/nature16940] |
75.2 GB | 3.7 Å |
| 2023-08-18 |  |
Cryo-EM structure of the wild-type solitary ECF module in MSP2N2 lipid nanodiscs in the ATPase open and nucleotide-free conformation (200 kV) [multiple data sets in TIFF format] | Thangaratnarajah C, Rheinberger J, Paulino C, Slotboom DJ [Pubmed: 37491368] [DOI: 10.1038/s41467-023-40266-1] |
1.9 TB | 3.8 Å |
| 2023-08-18 |  |
Cryo-EM structure of the wild-type solitary ECF module in DDM micelles in the ATPase open and nucleotide-free conformation (200 kV) [1862 multi-frame micrographs composed of 60 frames each in TIFF format] | Thangaratnarajah C, Rheinberger J, Paulino C, Slotboom DJ [Pubmed: 37491368] [DOI: 10.1038/s41467-023-40266-1] |
360.8 GB | 4.3 Å |
| 2019-10-30 |  |
Cryo-EM structure of the translocator of the outer mitochondrial membrane [2057 multi-frame micrographs composed of 49 frames each in TIFF format] | Araiso Y, Tsutsumi A, Qiu J, Imai K, Shiota T, Song J, Lindau C, Wenz LS, Sakaue H, Yunoki K, Kawano S, Suzuki J, Wischnewski M, Schutze C, Ariyama H, Ando T, Becker T, Lithgow T, Wiedemann N, Pfanner N, Kikkawa M, Endo T [Pubmed: 31600774] [DOI: 10.1038/s41586-019-1680-7] |
1.9 TB | 3.81 Å |
| 2021-04-06 |  |
Cryo-EM structure of the ternary Netrin 1-Neogenin 1-Repulsive Guidance Molecule B complex [1635 multi-frame micrographs composed of 40 frames each in TIFF format] | Robinson RA, Griffiths SC, van de Haar LL, Malinauskas T, van Battum EY, Zelina P, Schwab RA, Karia D, Malinauskaite L, Brignani S, van den Munkhof M, Dudukcu O, De Ruiter AA, Van den Heuvel DMA, Bishop B, Elegheert J, Aricescu AR, Pasterkamp RJ, Siebold C [Pubmed: 33740419] [DOI: 10.1016/j.cell.2021.02.045] |
1.2 TB | 5.98 Å |
| 2019-10-07 |  |
Cryo-EM structure of the serotonin 5-HT1B receptor coupled to heterotrimeric Go [multiple data sets in TIFF and MRCS formats] | Garcia-Nafria J, Nehme R, Edwards PC, Tate CG [Pubmed: 29925951] [DOI: 10.1038/s41586-018-0241-9] |
8.0 TB | 3.78 Å |
| 2022-09-09 |  |
Cryo-EM structure of the rigor state Jordan myosin-15-F-actin complex [2641 multi-frame micrographs composed of 24 frames each in TIFF format] | Gong R, Bird JE, Alushin GM [Pubmed: 35857845] [DOI: 10.1126/sciadv.abl4733] |
519.5 GB | 3.76 - 4.18 Å |
| 2023-03-27 |  |
Cryo-EM structure of the ribosome/Sec61 translocon with a macrocyclic inhibitor KZR-8445 [multiple data sets in TIFF and MRC formats] | Rehan S [DOI: 10.1101/2022.07.03.498529] |
12.9 TB | 3.2 Å |
