Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2024-02-13 |  |
5-HT2AR bound to a novel agonist in complex with a mini-Gq protein and an active-state stabilizing single-chain variable fragment (scFv16) obtained by cryo-electron microscopy (cryoEM) [7573 multi-frame micrographs composed of 50 frames each in TIFF format] | Barros-Alvarez X, Kim K, Panova O, Roth BL, Skiniotis G [Pubmed: 36171289] [DOI: 10.1038/s41586-022-05258-z] |
3.4 TB | 3.45 Å |
| 2024-02-08 |  |
Single-particle cryo-EM unaligned micrographs of prefusion SARS-CoV-2 spike omicron B.1.1.529 variant [13697 multi-frame micrographs composed of 50 frames each in TIFF format] | Cerutti G, Guo Y, Liu L, Liu L, Zhang Z, Luo Y, Huang Y, Wang HH, Ho DD, Sheng Z, Shapiro L [Pubmed: 35172173] [DOI: 10.1016/j.celrep.2022.110428] |
3.4 TB | 3.11 Å |
| 2022-02-04 |  |
Nudaurelia capensis omega virus capsid: virus-like particles expressed in Nicotiana benthamiana [multiple data sets in MRC format] | Castells-Graells R, Ribeiro JRS, Domitrovic T, Hesketh EL, Scarff CA, Johnson JE, Ranson NA, Lawson DM, Lomonossoff GP [Pubmed: 34031522] [DOI: 10.1038/s42003-021-02134-w] |
3.4 TB | 2.72 Å |
| 2022-01-21 |  |
Cryo-EM structure of a TTYH2 cis-dimer [5014 multi-frame micrographs composed of 50 frames each in TIFF format] | Li B, Hoel CM, Brohawn SG [Pubmed: 34824283] [DOI: 10.1038/s41467-021-27283-8] |
3.4 TB | 3.5 Å |
| 2020-11-20 |  |
Architecture of a catalytically active homotrimeric plant cellulose synthase complex [multiple data sets in TIFF format] | Purushotham PP, Ho RH, Zimmer JZ [Pubmed: 32646917] [DOI: 10.1126/science.abb2978] |
3.4 TB | 3.5 Å |
| 2024-01-16 |  |
Single particle cryo-EM dataset of contracted cowpea chlorotic mottle virus in plunge-frozen vitrified ice [6651 multi-frame micrographs composed of 1533 frames each in EER format] | Harder OF, Barrass SV, Drabbels M, Lorenz UJ [Pubmed: 37704664] [DOI: 10.1038/s41467-023-41444-x] |
3.4 TB | 1.64 Å |
| 2023-04-11 |  |
Human PRPH2-ROM1 hetero-dimer [10448 multi-frame micrographs composed of 61 frames each in TIFF format] | El Mazouni D [Pubmed: 36351012] [DOI: 10.1126/sciadv.add3677] |
3.4 TB | 3.7 Å |
| 2024-04-22 |  |
Cryo-EM structure of the complete inner kinetochore of the budding yeast point centromere [multiple data sets in EER and MRC formats] | Dendooven T, Zhang Z, Yang J, McLaughlin S, Schwabb J, Scheres S, Yatskevich S, Barford D [Pubmed: 37506202] [DOI: 10.1126/sciadv.adg7480] |
3.5 TB | 3.7 Å |
| 2024-04-17 |  |
Single-particle cryo-EM unaligned micrographs of NTD-directed neutralizing antibody 2-51 in complex with prefusion SARS-CoV-2 spike glycoprotein [13880 multi-frame micrographs composed of 50 frames each in TIFF format] | Cerutti G, Guo Y, Zhou T, Gorman J, Lee M, Rapp M, Reddem ER, Yu J, Bahna F, Bimela J, Huang Y, Katsamba PS, Liu L, Nair MS, Rawi R, Olia AS, Wang P, Zhang B, Chuang GY, Ho DD, Sheng Z, Kwong PD, Shapiro L [Pubmed: 33789084] [DOI: 10.1016/j.chom.2021.03.005] |
3.5 TB | 3.71 Å |
| 2022-09-09 |  |
Cryo-electron microscopy of human exostosin-like 3 (EXTL3) [1626 multi-frame micrographs composed of 70 frames each in MRC format] | Wilson LFL, Dendooven T, Hardwick SW, Echevarría-Poza A, Tryfona T, Krogh KBRM, Chirgadze DY, Luisi BF, Logan DT, Mani K, Dupree P [Pubmed: 35676258] [DOI: 10.1038/s41467-022-31048-2] |
3.5 TB | 2.43 Å |
| 2023-01-26 |  |
Apo-ChRmine in MSP1E3D1 lipid nanodisc [5339 multi-frame micrographs composed of 50 frames each in TIFF format] | Tucker KCT, Brohawn SGB [Pubmed: 35977941] [DOI: 10.1038/s41467-022-32441-7] |
3.5 TB | 4.1 Å |
| 2021-04-14 |  |
Identification of a conserved virion-stabilizing network inside the interprotomer pocket of enteroviruses [multiple data sets in MRC format] | Flatt JW, Domanska A, Seppälä AL, Butcher SJ [Pubmed: 33637854] [DOI: 10.1038/s42003-021-01779-x] |
3.5 TB | 2.7 - 3.4 Å |
| 2022-11-15 |  |
cryoEM movies from 30S-RbfA complex [3369 multi-frame micrographs composed of 20 frames each in MRC format] | Schedlbauer A, Fucini P, Connell SR [Pubmed: 34088665] [DOI: 10.1126/sciadv.abf7547] |
3.5 TB | 2.75 - 2.96 Å |
| 2023-07-28 |  |
Cryo-EM Motion Corrected Micrographs of Human Prothrombin:Prothrombinase [10217 micrographs in MRC format] | Ruben EA, Summers B, Rau MJ, Fitzpatrick JAJ, Di Cera E [Pubmed: 35427420] [DOI: 10.1182/blood.2022015807] |
3.5 TB | 4.1 Å |
| 2022-10-14 |  |
The structure of hemolysin A secretion system, wild-type HlyB/D complex without nucleotide. [multiple data sets in TIFF and MRC formats] | Zhao H, Chen J [Pubmed: 36055198] [DOI: 10.1016/j.cell.2022.07.017] |
3.5 TB | 2.9 Å |
| 2022-03-15 |  |
CryoEM Structure of Full-Length mGlu2 Bound to Ago-PAM ADX55164 and Glutamate [7011 multi-frame micrographs composed of 50 frames each in TIFF format] | Seven AB, Barros-Alvarez X, Skiniotis G [Pubmed: 34194039] [DOI: 10.1038/s41586-021-03680-3] |
3.5 TB | 3.3 Å |
| 2023-04-14 |  |
Thermostabilized human prestin in complex with chloride, sulfate or salicylate [multiple data sets in TIFF format] | Futamata H, Fukuda M, Umeda R, Yamashita K, Tomita A, Takahashi S, Shikakura T, Hayashi S, Kusakizako T, Nishizawa T, Homma K, Nureki O [Pubmed: 36266333] [DOI: 10.1038/s41467-022-34017-x] |
3.5 TB | 3.52 - 3.63 Å |
| 2020-10-02 |  |
Single-particle cryo-EM of the human CDK-activating kinase in complex with ATP-gamma-S [multiple data sets in TIFF format] | Greber BJ, Perez-Bertoldi JM, Lim K, Iavarone AT, Toso DB, Nogales E [Pubmed: 32855301] [DOI: 10.1073/pnas.2009627117] |
3.5 TB | 2.8 Å |
| 2020-04-03 |  |
Cryo-EM structure of the human PAC1 receptor coupled to an engineered heterotrimeric G protein [2895 multi-frame micrographs composed of 64 frames each in TIFF format] | Kobayashi K, Shihoya W, Nishizawa T, Kadji FMN, Aoki J, Inoue A, Nureki O [Pubmed: 32157248] [DOI: 10.1038/s41594-020-0386-8] |
3.5 TB | 3.9 Å |
| 2019-12-04 |  |
Cryo-EM structure of multidrug efflux pump MexAB-OprM [8722 multi-frame micrographs composed of 32 frames each in MRC format] | Tsutsumi K, Yonehara R, Ishizaka-Ikeda E, Miyazaki N, Maeda S, Iwasaki K, Nakagawa A, Yamashita E [Pubmed: 30944318] [DOI: 10.1038/s41467-019-09463-9] |
3.5 TB | 3.64 - 3.76 Å |
| 2023-07-13 |  |
CryoEM micrographs of guanylyl cyclase receptor–Hsp90 complex [10308 multi-frame micrographs composed of 69 frames each in TIFF format] | Caveney NA, Tsutsumi N, Garica KC [DOI: 10.1101/2023.02.14.528495] |
3.5 TB | 3.9 Å |
| 2023-07-11 |  |
Movies of Glycine/Glutamate bound GluN1a-GluN2D NMDAR [17718 multi-frame micrographs composed of 30 frames each in TIFF format] | Chou TH, Kang H, Simorowski N, Traynelis SF, Furukawa H [Pubmed: 36309015] [DOI: 10.1016/j.molcel.2022.10.008] |
3.5 TB | 3.38 Å |
| 2022-07-27 |  |
Cryo-EM structure of apo-state MrgD-Gi complex [14985 multi-frame micrographs composed of 66 frames each in TIFF format] | Kawamoto A [Pubmed: 35840655] [DOI: 10.1038/s42003-022-03668-3] |
3.5 TB | 2.9 - 3.1 Å |
| 2024-04-17 |  |
Cryo EM of ABC transporter KpsMT in complex with KpsE - Apo 2, Glycolipid 1 and Glycolipid 2 states [13961 multi-frame micrographs composed of 40 frames each in TIFF format] | Kuklewicz J [Pubmed: 38570679] [DOI: 10.1038/s41586-024-07248-9] |
3.6 TB | 3.3 - 3.5 Å |
| 2019-07-25 |  |
TRPV2 ion channel gating through allosteric domain coupling revealed by cryo-EM [1969 multi-frame micrographs composed of 35 frames each in MRCS format] | Serysheva II, Chiu W, Wensel TG [Pubmed: 30598551] [DOI: 10.1038/s41594-018-0168-8] |
3.6 TB | 4.0 Å |
