Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2022-12-06 |  |
Single particle cryo-EM structure of RIG-I bound to the end of p3SLR30 (+AMPPNP) [2744 multi-frame micrographs composed of 38 frames each in TIFF format] | Wang W, Pyle AM [Pubmed: 36272408] [DOI: 10.1016/j.molcel.2022.09.029] |
1.5 TB | 3.3 Å |
| 2023-10-03 |  |
Single particle cryo-EM dataset of mitochondrial respiratory complex I from Macaca mulatta [2523 multi-frame micrographs composed of 40 frames each in MRC format] | Agip ANA, Hirst J, Blaza JN [Pubmed: 30786232] [DOI: 10.1146/annurev-biophys-052118-115704] |
1.5 TB | 4.1 Å |
| 2024-06-12 |  |
Graphene-sandwiched spike [2200 multi-frame micrographs composed of 32 frames each in TIFF format] | Xu J, Gao X, Zheng L, Jia X, Xu K, Ma Y, Wei X, Liu N, Peng H, Wang HW [Pubmed: 38252835] [DOI: 10.1073/pnas.2309384121] |
1.5 TB | 2.5 Å |
| 2024-12-21 |  |
Cryo electron micrographs of soluble human AP-3 core [17545 micrographs in MRC format] | Baker RW, Begley M [Pubmed: 38895279] [DOI: 10.1101/2024.06.05.597630] |
1.5 TB | 3.6 Å |
| 2023-07-14 |  |
Mouse apoferritin, Dataset A taken with CRYO ARM 300 [9096 multi-frame micrographs composed of 40 frames each in TIFF format] | Maki-Yonekura S, Kawakami K, Takaba K, Hamaguchi T, Yonekura K [Pubmed: 37258702] [DOI: 10.1038/s42004-023-00900-x] |
1.5 TB | 1.19 Å |
| 2022-03-22 |  |
High-resolution Cryo-EM of Fab-labeled human parechovirus 3 [6759 multi-frame micrographs composed of 16 frames each in MRCS format] | Domanska A, Flatt JW, Jukonen JJJ, Geraets JA, Butcher SJ [Pubmed: 30463974] [DOI: 10.1128/JVI.01597-18] |
1.5 TB | 2.8 Å |
| 2025-07-03 |  |
Raw cryo-electron micrographs used in SPA reconstruction of MlaC in complex with a soluble construct of MlaD [9012 multi-frame micrographs composed of 50 frames each in TIFF format] | Wotherspoon PW, Bui SB, Sridhar PS, Bergeron JRCB, Knowles TJK [Pubmed: 39080293] [DOI: 10.1038/s41467-024-50615-3] |
1.5 TB | 4.35 - 4.38 Å |
| 2023-07-31 |  |
Cryo-EM micrographs of Pyn-YSPTSPpS fibers without Ca2+ [6233 multi-frame micrographs composed of 40 frames each in TIFF format] | Guo J, Egelman EH, Xu B, Wang F [DOI: 10.1016/j.chempr.2023.04.023] |
1.5 TB | 3.1 Å |
| 2025-02-10 |  |
HSV-1 DNA polymerase-processivity factor complex in halted elongation state [multiple data sets in TIFF and MRC formats] | Gustavsson E, Grünewald K, Elias P, Hällberg BM [Pubmed: 38806233] [DOI: 10.1093/nar/gkae374] |
1.5 TB | 2.4 - 2.97 Å |
| 2022-12-06 |  |
Single particle cryo-EM structure of RIG-I in complex with OHdsRNA [2838 multi-frame micrographs composed of 38 frames each in TIFF format] | Wang W, Pyle AM [Pubmed: 36272408] [DOI: 10.1016/j.molcel.2022.09.029] |
1.5 TB | 3.5 Å |
| 2021-05-26 |  |
CryoEM single particle analysis of 65 kDa human haemoglobin using a 200 kV Talos Arctica [1416 multi-frame micrographs composed of 70 frames each in TIFF format] | Mann D, Sachse C | 1.5 TB | 3.04 Å |
| 2018-10-25 |  |
Thermoplasma acidophilum 20S [1175 multi-frame micrographs composed of 50 frames each in MRC format] | Eng ET, Kopylov M, Negro CJ, Dallaykan S, Rice WJ, Jordan KJ, Kelley K, Carragher BO, Potter CS | 1.5 TB | 2.1 Å |
| 2024-07-09 |  |
Native capsid of Rhodobacter microvirus Ebor computed with I4 symmetry [954 multi-frame micrographs composed of 2870 frames each in EER format] | Bardy P, MacDonald CIW, Kirchberger PC, Jenkins HT, Botka T, Byrom L, Alim NTB, Traore DAK, Konig HC, Nicholas TR, Chechik M, Hart SJ, Turkenburg JP, Blaza JN, Beatty JT, Fogg PCM, Antson AA [DOI: 10.1101/2024.06.11.598214] |
1.5 TB | 3.2 Å |
| 2023-11-06 |  |
Single particle cryo-EM structure of RIG-I:RNA:Riplet ternary complex [3420 multi-frame micrographs composed of 40 frames each in TIFF format] | Wang W, Pyle AM [DOI: 10.1038/s41467-023-42982-0] |
1.5 TB | — |
| 2024-01-23 |  |
SpCas9 bound to 6 nucleotide complementary DNA substrate [multiple data sets in TIFF and DM4 formats] | Pacesa M, Loeff L, Querques I, Muckenfuss LM, Sawicka M, Jinek M [Pubmed: 36002571] [DOI: 10.1038/s41586-022-05114-0] |
1.5 TB | 3.87 Å |
| 2023-12-12 |  |
Optimizing Cryo-FIB Lamellas for sub-5Å in situ Structural Biology [multiple data sets in MRC format] | Khavnekar S, Vrbovská V, Zaoralová M, Kelley R, Beck F, Kotecha A, Plitzko JM, Erdmann PS [DOI: 10.1101/2022.06.16.496417] |
1.5 TB | 4.6 Å |
| 2022-03-08 |  |
Tutorial for high-throughput cryo-EM structure determination of amyloids: Dataset 2 [4000 multi-frame micrographs composed of 34 frames each in TIFF format] | Lövestam S, Scheres SHW [Pubmed: 35244536] [DOI: 10.7554/eLife.76494] |
1.5 TB | 1.92 Å |
| 2022-05-25 |  |
A drug and ATP binding site in type 1 ryanodine receptor [6890 multi-frame micrographs composed of 50 frames each in TIFF format] | Melville Z, Dridi H, Yuan Q, Reiken S, Wronska A, Liu Y, Clarke OB, Marks AR [Pubmed: 35580609] [DOI: 10.1016/j.str.2022.04.010] |
1.5 TB | 2.45 Å |
| 2021-10-01 |  |
Cryo-EM structure of the SpCas9 delta4CE Ternary Complex [2570 multi-frame micrographs composed of 60 frames each in TIFF format] | Laughlin TG, Shams A, Savage DF [Pubmed: 34580310] [DOI: 10.1038/s41467-021-25992-8] |
1.5 TB | 6.2 Å |
| 2022-09-20 |  |
Human amino acid transporter EAAT2 [multiple data sets in TIFF format] | Kato T, Kusakizako T, Yamashita K, Nishizawa T, Nureki O [Pubmed: 35953475] [DOI: 10.1038/s41467-022-32442-6] |
1.5 TB | 3.49 - 3.58 Å |
| 2024-09-26 |  |
Cryo-EM structure of uropathogenic Escherichia coli CysK:CdiA:tRNA complex [7044 multi-frame micrographs composed of 50 frames each in TIFF format] | Feng Z, Yashiro Y, Tomita K [Pubmed: 39228374] [DOI: 10.1093/nar/gkae735] |
1.5 TB | 2.6 - 3.04 Å |
| 2020-10-09 |  |
mouse cGAS with nucleosomes from 293T [2979 multi-frame micrographs composed of 40 frames each in MRC format] | Zhao B, Xu P, Rowlett CM, Jing T, Shinde O, Lei Y, West AP, Liu WR, Li P [Pubmed: 32911481] [DOI: 10.1038/s41586-020-2749-z] |
1.5 TB | 4.36 Å |
| 2023-10-06 |  |
CryoEM micrographs collected on a RAD51-ADP filament sample [9214 multi-frame micrographs composed of 50 frames each in TIFF format] | Appleby R, Bollschweiler D, Chirgadze DY, Joudeh L, Pellegrini L [Pubmed: 37216117] [DOI: 10.1016/j.isci.2023.106689] |
1.5 TB | 3.6 Å |
| 2022-03-14 |  |
2.1Å T20S Proteosome from 200kV Glacios with Selectris Falcon 4 [4075 multi-frame micrographs composed of 854 frames each in EER format] | Koh FA, Khavnekar K, Kotecha A [Pubmed: 35377368] [DOI: 10.3791/63519] |
1.5 TB | 2.1 Å |
| 2021-10-25 |  |
Cryo-EM structure of PilA-N/C from Geobacter sulfurreducens [7651 multi-frame micrographs composed of 27 frames each in TIFF format] | Gu Y, Srikanth V, Salazar-Morales AI, Jain R, O'Brien JP, Yi SM, Soni RK, Samatey FA, Yalcin SE, Malvankar NS [Pubmed: 34471289] [DOI: 10.1038/s41586-021-03857-w] |
1.5 TB | 3.8 Å |
