Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2023-10-03 |  |
Single-particle Cryo-EM datasets of hydroxycarboxylic acid receptor signaling complexes [multiple data sets in TIFF format] | Suzuki S, Suzuki H, Fujiyoshi Y [Pubmed: 37736747] [DOI: 10.1038/s41467-023-41650-7] |
4.6 TB | 2.85 - 3.11 Å |
| 2020-12-04 |  |
Single-particle Cryo-EM of the Escherichia coli McrBC complex [1161 multi-frame micrographs composed of 80 frames each in TIFF format] | Niu Y, Suzuki H, Hosford CJ, Walz T, Chappie JS [Pubmed: 33219217] [DOI: 10.1038/s41467-020-19735-4] |
702.5 GB | 3.28 Å |
| 2020-12-04 |  |
Single-particle Cryo-EM of the Thermococcus gammatolerans McrB AAA+ hexamer [1605 multi-frame micrographs composed of 40 frames each in TIFF format] | Niu Y, Suzuki H, Hosford CJ, Walz T, Chappie JS [Pubmed: 33219217] [DOI: 10.1038/s41467-020-19735-4] |
644.6 GB | 3.1 Å |
| 2020-12-04 |  |
Single-particle Cryo-EM of the Thermococcus gammatolerans McrBC complex [2178 multi-frame micrographs composed of 40 frames each in TIFF format] | Niu Y, Suzuki H, Hosford CJ, Walz T, Chappie JS [Pubmed: 33219217] [DOI: 10.1038/s41467-020-19735-4] |
883.3 GB | 2.44 Å |
| 2020-12-22 |  |
Single-particle Cryo-EM of the endogenous human BAF complex alone [4865 micrographs in MRC format] | Suzuki H, Mashtalir N, Kadoch C, Walz T [Pubmed: 33053319] [DOI: 10.1016/j.cell.2020.09.051] |
258.1 GB | 7.8 Å |
| 2023-09-21 |  |
Single-particle cryo-EM dataset of ALC1 bound to an asymmetric, site-specifically PARylated nucleosome [multiple data sets in TIFF and MRCS formats] | Bacic L, Gaullier G, Deindl S [Pubmed: 38307862] [DOI: 10.1038/s41467-024-45237-8] |
8.3 TB | 3.0 Å |
| 2023-08-25 |  |
Single-particle cryo-EM dataset of an asymmetric nucleosome (10-N-0) [multiple data sets in TIFF and MRCS formats] | Gaullier G | 1.2 TB | 4.1 Å |
| 2022-07-01 |  |
Single-particle cryo-EM dataset of the Vairimorpha necatrix ribosome [3284 multi-frame micrographs composed of 32 frames each in TIFF format] | Barandun J, Hunziker M, Vossbrinck CR, Klinge S [Pubmed: 31332387] [DOI: 10.1038/s41564-019-0514-6] |
1.0 TB | 3.26 - 3.7 Å |
| 2023-07-25 |  |
Single-particle cryo-EM dataset of the complex between ALC1 and a PARylated nucleosome [multiple data sets in TIFF and MRCS formats] | Bacic L, Gaullier G, Deindl S [Pubmed: 34486521] [DOI: 10.7554/eLife.71420] |
14.9 TB | 4.8 - 10.0 Å |
| 2021-01-29 |  |
Single-particle cryo-EM dataset of the complex between a nucleosome and the regulatory linker of ALC1 [multiple data sets in TIFF and MRCS formats] | Bacic L, Gaullier G, Deindl S [Pubmed: 33357431] [DOI: 10.1016/j.celrep.2020.108529] |
6.8 TB | 2.5 - 3.0 Å |
| 2020-12-02 |  |
Single-particle cryo-EM micrographs of 197bp nucleosome with scFv [1986 multi-frame micrographs composed of 40 frames each in TIFF format] | Zhou BR [Pubmed: 33238161] [DOI: 10.1016/j.molcel.2020.10.038] |
738.9 GB | 2.85 Å |
| 2020-12-02 |  |
Single-particle cryo-EM micrographs of a chromatosome containing chimeric linker histone gH1.10-ncH1.4 [1426 multi-frame micrographs composed of 40 frames each in TIFF format] | Zhou BR [Pubmed: 33238161] [DOI: 10.1016/j.molcel.2020.10.038] |
571.7 GB | 3.03 Å |
| 2020-12-02 |  |
Single-particle cryo-EM micrographs of a chromatosome containing human linker histone H1.0 [1069 multi-frame micrographs composed of 76 frames each in TIFF format] | Zhou BR [Pubmed: 33238161] [DOI: 10.1016/j.molcel.2020.10.038] |
349.6 GB | 2.93 Å |
| 2020-12-02 |  |
Single-particle cryo-EM micrographs of a chromatosome containing human linker histone H1.10 [667 multi-frame micrographs composed of 38 frames each in TIFF format] | Zhou BR [Pubmed: 33238161] [DOI: 10.1016/j.molcel.2020.10.038] |
278.2 GB | 3.12 Å |
| 2020-12-02 |  |
Single-particle cryo-EM micrographs of a chromatosome containing human linker histone H1.4 [1183 multi-frame micrographs composed of 76 frames each in TIFF format] | Zhou BR [Pubmed: 33238161] [DOI: 10.1016/j.molcel.2020.10.038] |
208.9 GB | 2.76 Å |
| 2023-10-13 |  |
Single-particle cryo-EM of APC/C-CDH1-UBE2C-UBE2S-Ubiquitin-CyclinB-NTD [25837 multi-frame micrographs composed of 39 frames each in TIFF format] | Bodrug T, Welsh KA, Bolhuis DL, Paulаkonis E, Martinez-Chacin RC, Liu B, Pinkin N, Bonacci T, Cui L, Xu P, Roscow O, Amann SJ, Grishkovskaya I, Emanuele MJ, Harrison JS, Steimel JP, Hahn KM, Zhang W, Zhong ED, Haselbach D, Brown NG [Pubmed: 37735619] [DOI: 10.1038/s41594-023-01105-5] |
22.8 TB | 3.5 Å |
| 2023-10-03 |  |
Single-particle cryo-EM of APC/C-CDH1-UBE2C-Ubiquitin-CyclinB-NTD [25354 multi-frame micrographs composed of 39 frames each in TIFF format] | Bodrug T, Welsh KA, Bolhuis DL, Paulаkonis E, Martinez-Chacin RC, Liu B, Pinkin N, Bonacci T, Cui L, Xu P, Roscow O, Amann SJ, Grishkovskaya I, Emanuele MJ, Harrison JS, Steimel JP, Hahn KM, Zhang W, Zhong ED, Haselbach D, Brown NG [Pubmed: 37735619] [DOI: 10.1038/s41594-023-01105-5] |
19.0 TB | 4.0 Å |
| 2021-11-08 |  |
Single-particle cryo-EM of the full-length merozoite surface protein 1 from Plasmodium falciparum [multiple data sets in MRC and MRCS formats] | Dijkman PM, Marzluf T, Zhang Y, Chang SYS, Helm D, Lanzer M, Bujard H, Kudryashev M [Pubmed: 34078606] [DOI: 10.1126/sciadv.abg0465] |
4.3 TB | 3.1 - 3.6 Å |
| 2020-10-02 |  |
Single-particle cryo-EM of the human CDK-activating kinase in complex with ATP-gamma-S [multiple data sets in TIFF format] | Greber BJ, Perez-Bertoldi JM, Lim K, Iavarone AT, Toso DB, Nogales E [Pubmed: 32855301] [DOI: 10.1073/pnas.2009627117] |
3.5 TB | 2.8 Å |
| 2020-09-28 |  |
Single-particle cryo-EM of the human CDK-activating kinase in complex with THZ1 [4453 multi-frame micrographs composed of 69 frames each in TIFF format] | Greber BJ, Perez-Bertoldi JM, Lim K, Iavarone AT, Toso DB, Nogales E [Pubmed: 32855301] [DOI: 10.1073/pnas.2009627117] |
2.4 TB | 3.3 Å |
| 2024-04-17 |  |
Single-particle cryo-EM unaligned micrographs of NTD-directed neutralizing antibody 2-51 in complex with prefusion SARS-CoV-2 spike glycoprotein [13880 multi-frame micrographs composed of 50 frames each in TIFF format] | Cerutti G, Guo Y, Zhou T, Gorman J, Lee M, Rapp M, Reddem ER, Yu J, Bahna F, Bimela J, Huang Y, Katsamba PS, Liu L, Nair MS, Rawi R, Olia AS, Wang P, Zhang B, Chuang GY, Ho DD, Sheng Z, Kwong PD, Shapiro L [Pubmed: 33789084] [DOI: 10.1016/j.chom.2021.03.005] |
3.5 TB | 3.71 Å |
| 2024-02-06 |  |
Single-particle cryo-EM unaligned micrographs of NTD-directed neutralizing antibody 4-18 in complex with prefusion SARS-CoV-2 spike glycoprotein [7711 multi-frame micrographs composed of 50 frames each in TIFF format] | Cerutti G, Guo Y, Zhou T, Gorman J, Lee M, Rapp M, Reddem ER, Yu J, Bahna F, Bimela J, Huang Y, Katsamba PS, Liu L, Nair MS, Rawi R, Olia AS, Wang P, Zhang B, Chuang GY, Ho DD, Sheng Z, Kwong PD, Shapiro L [Pubmed: 33789084] [DOI: 10.1016/j.chom.2021.03.005] |
2.0 TB | 2.97 Å |
| 2024-03-22 |  |
Single-particle cryo-EM unaligned micrographs of NTD-directed neutralizing antibody 5-24 in complex with prefusion SARS-CoV-2 spike glycoprotein [9221 multi-frame micrographs composed of 50 frames each in TIFF format] | Cerutti G, Guo Y, Zhou T, Gorman J, Lee M, Rapp M, Reddem ER, Yu J, Bahna F, Bimela J, Huang Y, Katsamba PS, Liu L, Nair MS, Rawi R, Olia AS, Wang P, Zhang B, Chuang GY, Ho DD, Sheng Z, Kwong PD, Shapiro L [Pubmed: 33789084] [DOI: 10.1016/j.chom.2021.03.005] |
2.4 TB | 3.9 Å |
| 2024-04-15 |  |
Single-particle cryo-EM unaligned micrographs of NTD-directed neutralizing antibody 5-7 in complex with prefusion SARS-CoV-2 spike glycoprotein [6688 multi-frame micrographs composed of 60 frames each in TIFF format] | Cerutti G, Guo Y, Wang P, Nair MS, Wang M, Huang Y, Yu J, Liu L, Katsamba PS, Bahna F, Reddem ER, Kwong PD, Ho DD, Sheng Z, Shapiro L [Pubmed: 34706271] [DOI: 10.1016/j.celrep.2021.109928] |
1.6 TB | 3.5 Å |
| 2024-02-08 |  |
Single-particle cryo-EM unaligned micrographs of prefusion SARS-CoV-2 spike omicron B.1.1.529 variant [13697 multi-frame micrographs composed of 50 frames each in TIFF format] | Cerutti G, Guo Y, Liu L, Liu L, Zhang Z, Luo Y, Huang Y, Wang HH, Ho DD, Sheng Z, Shapiro L [Pubmed: 35172173] [DOI: 10.1016/j.celrep.2022.110428] |
3.4 TB | 3.11 Å |
