오사카 대학의 EMPIAR-PDBj 팀은, 아시아의 EM 연구자가 용량이 큰 EM 이미지를 EMPIAR 데이터베이스에 전송하는 것을 돕고 있습니다. 인터넷을 통하여 EBI (UK)에 직>접 데이터를 전송하는 대신, 이용자는 우편이나 택배를 통하여 하드 디스크를 오사카 대학으로 보내실 수 있습니다. 혹은 인터넷을 이용하여 오사카 대학의 서버로 전>송 하실 수 있습니다. 오사카 대학에 데이터 전송 서비스를 희망하시는 분은 데이터를 보내시기 전에 먼저 이메일 통하여 등록하시고 싶은 EM데이터에 관하여 상담하십시오.
Release date | Imageset | Title | Authors and references | Size | Resolution |
---|---|---|---|---|---|
2020-09-02 | ISWI-NCP complex in the ADP-bound state [stack of 168430 particles in MRCS format] | Yan L, Wu H, Li X, Gao N, Chen Z [Pubmed: 32123390] [DOI: 10.1038/s41594-020-0388-6] |
36.2 GB | 2.9 Å | |
2020-09-02 | Native Pyruvate Dehydrogenase Complex from Neurospora crassa [4887 micrographs in MRC format] | Forsberg BO, Aibara S, Howard RJ, Mortezaei N, Lindahl E [Pubmed: 32938938] [DOI: 10.1038/s41467-020-18401-z] |
305.5 GB | 4.1 - 4.4 Å | |
2020-08-28 | Cryo-EM structures of four polymorphic TDP-43 amyloid cores [multiple data sets in MRC format] | Cao Q, Boyer DR, Sawaya MR, Ge P, Eisenberg DS [Pubmed: 31235914] [DOI: 10.1038/s41594-019-0248-4] |
4.5 TB | 3.3 - 3.8 Å | |
2020-08-25 | FAK structure from single particle analysis of 2D crystals [multiple data sets in MRC, TIFF and MRCS formats] | Acebron I, Righetto RD, Biyani N, Chami M, Boskovic J, Stahlberg H, Lietha D [Pubmed: 32779739] [DOI: 10.15252/embj.2020104743] |
1.8 TB | 5.96 - 6.32 Å | |
2020-08-25 | Structures of the human mitochondrial ribosome bound to EF-G1 reveal distinct features of mitochondrial translation elongation [stack of 6649 particles in MRC format] | Bhargava K, Datta PP, Kaushal PS, Keshavan P, Spremulli LL, Banavali NK [Pubmed: 32737313] [DOI: 10.1038/s41467-020-17715-2] |
753.5 GB | 2.96 - 3.96 Å | |
2020-08-19 | Cryo-EM structure of SARS-CoV-2 Spike Proteins on intact virions [7982 multi-frame micrographs composed of 48 frames each in TIFF format] | Ke Z, Qu K, Cortese M, Zila V, Nakane T, Xiong X, Scheres SHW, Briggs JAG [Pubmed: 32805734] [DOI: 10.1038/s41586-020-2665-2] |
2.1 TB | 3.5 - 4.1 Å | |
2020-08-19 | Subtomogram averaging and classification of SARS-CoV-2 Spike Proteins on intact virions [multiple data sets in TIFF and MRC formats] | Ke Z, Oton J, Cortese M, Zila V, Zivanov J, Lu JM, Peukes J, Scheres SHW, Briggs JAG [Pubmed: 32805734] [DOI: 10.1038/s41586-020-2665-2] |
372.4 GB | 7.7 - 9.9 Å | |
2020-08-18 | Yeast Tilt Series Collected on Lamella Generated by Fully Automated FIB Milling [1 tilt series in MRC format] | Zachs T, Schertel A, Medeiros J, Weiss GL, Hugener J, Matos J, Pilhofer M [Pubmed: 32149604] [DOI: 10.7554/eLife.52286] |
2.6 GB | 30.0 Å | |
2020-08-18 | Mechanism of Ribosome Rescue by Alternative Release Factor B [multiple data sets in MRC format] | Chan K-H, Petrychenko V, Mueller C, Maracci C, Holtkamp W, Wilson DN, Fischer N, Rodnina MV [Pubmed: 32796827] [DOI: 10.1038/s41467-020-17853-7] |
788.2 GB | 2.6 - 3.7 Å | |
2020-08-18 | Cryo Electron Tomograms of Membrane Fractions of Rabbit Skeletal Muscle for Structural Determination of RyR1 in SR Vesicles at subnanometer resolution [48 tilt series in MRC format] | Sanchez RM, Zhang Y, Chen W, Dietrich L, Kudryashev M [Pubmed: 32709843] [DOI: 10.1038/s41467-020-17466-0] |
435.8 GB | 9.1 Å | |
2020-08-18 | CryoEM structure of human CMG bound to ATPgammaS and DNA [3694 multi-frame micrographs composed of 40 frames each in MRC format] | Rzechorzek NJ, Pellegrini L [Pubmed: 32453425] [DOI: 10.1093/nar/gkaa429] |
7.7 TB | 3.29 - 3.41 Å | |
2020-08-18 | CryoEM structure of human CMG bound to AND-1 (CMGA) [1844 multi-frame micrographs composed of 23 frames each in MRC format] | Rzechorzek NJ, Hardwick SW, Chirgadze DY, Pellegrini L [Pubmed: 32453425] [DOI: 10.1093/nar/gkaa429] |
1.3 TB | 6.77 Å | |
2020-08-18 | Cryo-EM structure of Human NatB with an Alpha-Synuclein peptide and CoA conjugate [5281 multi-frame micrographs composed of 35 frames each in TIFF format] | Deng S, Pan B, Gottlieb L, Petersson EJ, Marmorstein R [Pubmed: 32885784] [DOI: 10.7554/eLife.57491] |
2.0 TB | 3.46 Å | |
2020-08-17 | CryoEM dataset of sarkosyl-insoluble fractions from the putamen of multiple system atrophy brain of case 1 [multiple data sets in TIFF, MRC and MRCS formats] | Schweighauser M, Shi Y, Tarutani A, Kametani F, Murzin AG, Ghetti B, Matsubara T, Tomita T, Ando T, Hasegawa K, Murayama S, Yoshida M, Hasegawa M, Scheres SHW, Goedert M [Pubmed: 32461689] [DOI: 10.1038/s41586-020-2317-6] |
3.2 TB | 2.6 Å | |
2020-08-17 | Helical Reconstruction of a left-handed and membrnae-bound ESCRT-III copolymer comprised of human CHMP1B and IST1 [stack of 57915 particles in MRCS format] | Nguyen HC, Talledge N, McCullough J, Sharma A, Moss FR, Iwasa JH, Vershinin MD, Sundquist WI, Frost A [Pubmed: 32251413] [DOI: 10.1038/s41594-020-0404-x] |
26.8 GB | 3.1 Å | |
2020-08-12 | TEM tomograms of Drosophila tracheal terminal cells during subcellular tube formation [multiple data sets in TIFF and MRC formats] | Mathew R, Rios-Barrera LD, Machado P, Schwab Y, Leptin M [Pubmed: 32657472] [DOI: 10.15252/embj.2020105332] |
366.7 GB | — | |
2020-08-11 | Chicken CALHM1, 1 mM EDTA [10513 multi-frame micrographs composed of 50 frames each in TIFF format] | Syrjanen JL, Michalski K, Chou TH, Grant T, Rao S, Simorowski N, Tucker SJ, Grigorieff N, Furukawa H [Pubmed: 31988524] [DOI: 10.1038/s41594-019-0369-9] |
2.4 TB | 3.63 Å | |
2020-08-11 | Chicken CALHM1 - Human CALHM2 chimera [10927 multi-frame micrographs composed of 30 frames each in TIFF format] | Syrjanen JL, Michalski K, Chou TH, Grant T, Rao S, Simorowski N, Tucker SJ, Grigorieff N, Furukawa H [Pubmed: 31988524] [DOI: 10.1038/s41594-019-0369-9] |
1.1 TB | 3.87 Å | |
2020-08-11 | Human CALHM2 gap junction in nanodisc, 1 mM CaCl2 and 1 mM ATP [891 multi-frame micrographs composed of 50 frames each in TIFF format] | Syrjanen JL, Michalski K, Chou TH, Grant T, Rao S, Simorowski N, Tucker SJ, Grigorieff N, Furukawa H [Pubmed: 31988524] [DOI: 10.1038/s41594-019-0369-9] |
216.5 GB | 3.68 Å | |
2020-08-11 | Human CALHM2 in nanodisc, 1 mM EDTA [2328 multi-frame micrographs composed of 50 frames each in TIFF format] | Syrjanen JL, Michalski K, Chou TH, Grant T, Rao S, Simorowski N, Tucker SJ, Grigorieff N, Furukawa H [Pubmed: 31988524] [DOI: 10.1038/s41594-019-0369-9] |
604.3 GB | 3.68 Å | |
2020-08-06 | Cryo-EM Structure of GluD1-Orphan Delta Receptor Reveals a Novel Architecture in the Ionotropic Glutamate Receptor Family [3938 multi-frame micrographs composed of 40 frames each in MRC format] | Burada AP, Vinnakota R, Kumar J [Pubmed: 31925409] [DOI: 10.1038/s41594-019-0359-y] |
6.5 TB | 8.1 Å | |
2020-08-06 | Cropped regions from Serial Block Face SEM of HeLa cell pellet with 10 nm pixels and 50 nm slices (benchmark dataset) [18 multi-frame micrographs composed of 300 frames each in TIFF format] | Peddie CP, Jones ML, Collinson LM | 15.6 GB | — | |
2020-08-06 | FIB/SEM sample dataset MCB-CLEM IV Weiner [1 multi-frame micrographs composed of 844 frames each in TIFF format] | Weiner A | 2.8 GB | — | |
2020-07-30 | Cryo electron microscopy of RyR1 in the presence and abscence of Ca, Caffeine and ATP ligands [stack of 791956 particles in SPIDER format] | Dashti A [Pubmed: 32948759] [DOI: 10.1038/s41467-020-18403-x] |
334.2 GB | 4.5 Å | |
2020-07-30 | Single-Particle Cryo-EM of Arabinosyltransferase EmbB from Mycobacterium smegmatis, Collected using both Falcon III and K2 Detectors [multiple data sets in MRCS, TIFF and MRC formats] | Tan YZ, Rodrigues J, Keener JE, Zheng RB, Brunton R, Kloss B, Giacometti SI, Rosário AL, Zhang L, Niederweis M, Clarke OB, Lowary TL, Marty MT, Archer M, Potter CS, Carragher B, Mancia F [Pubmed: 32636380] [DOI: 10.1038/s41467-020-17202-8] |
4.5 TB | 3.3 Å |