Due to a storage failure, some data files are currently inaccessible (Markted: Incomplete dataset).
We are currently working to restore, but we are accepting priority requests.(email, inquiry).
We are restoring lost files from backups in the following order:
We apologize for the inconvenience and appreciate your understanding.
오사카 대학의 EMPIAR-PDBj 팀은, 아시아의 EM 연구자가 용량이 큰 EM 이미지를 EMPIAR 데이터베이스에 전송하는 것을 돕고 있습니다. 인터넷을 통하여 EBI (UK)에 직>접 데이터를 전송하는 대신, 이용자는 우편이나 택배를 통하여 하드 디스크를 오사카 대학으로 보내실 수 있습니다. 혹은 인터넷을 이용하여 오사카 대학의 서버로 전>송 하실 수 있습니다. 오사카 대학에 데이터 전송 서비스를 희망하시는 분은 데이터를 보내시기 전에 먼저 이메일 통하여 등록하시고 싶은 EM데이터에 관하여 상담하십시오.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2023-06-30 | Cryo-electron micrographs of hAQP2 in DDM [6592 multi-frame micrographs composed of 40 frames each in TIFF format] | Kamegawa A, Suzuki H, Fujiyoshi Y [Pubmed: 37315821] [DOI: 10.1016/j.jsb.2023.107984] |
1.2 TB | 2.89 Å | |
| 2023-06-29 | E. coli 50S ribosome bound to compound streptogramin analogs SA1 and SB1 [multiple data sets in TIFF and MRC formats] | Seiple IB, Pellegrino J, Fraser JS, Lee DJ | 1.3 TB | 2.35 Å | |
| 2023-06-29 | E. coli 50S ribosome bound to compound streptogramin analog SAB001 [multiple data sets in TIFF and MRC formats] | Pellegrino J, Fraser JS, Lee DJ, Seiple IB | 1.6 TB | 2.23 Å | |
| 2023-06-29 | E. coli 50S ribosome bound to compound SAB002 [multiple data sets in MRC and TIFF formats] | Pellegrino J, Seiple IB, Fraser JS, Lee DJ | 2.4 TB | 2.27 Å | |
| 2023-06-29 | E. coli 50S ribosome bound to streptogramin A analog 3142 [multiple data sets in MRC and TIFF formats] | Pellegrino J, Seiple IB, Fraser JS, Lee DJ | 5.3 TB | 1.91 Å | |
| 2023-06-29 | E. coli 50S ribosome bound to streptogramin A analog 3146 [multiple data sets in MRC and TIFF formats] | Pellegrino J, Seiple IB, Fraser JS, Lee DJ | 2.1 TB | 2.38 Å | |
| 2023-06-29 | E. coli 50S ribosome bound to D-linker solithromycin conjugate [multiple data sets in TIFF and MRC formats] | Seiple IB, Pellegrino J, Fraser JS, Lee DJ | 1.2 TB | 2.35 Å | |
| 2023-06-29 | E. coli 50S ribosome bound to L-linker solithromycin conjugate [multiple data sets in MRC and TIFF formats] | Seiple IB, Pellegrino J, Fraser JS, Lee DJ | 835.4 GB | 2.25 Å | |
| 2023-06-29 | E. coli 50S ribosome bound to solithromycin and VM1 [multiple data sets in MRC and TIFF formats] | Fraser JS, Seiple IB, Pellegrino J, Lee DJ | 3.2 TB | 1.99 Å | |
| 2023-06-27 | Unaligned cryo-EM micrographs of Human SHMT1 in complex with RNA [5450 multi-frame micrographs composed of 40 frames each in TIFF format] | Spizzichino S, Marabelli C, Chaves-Sanjuan A, Bolognesi M, Giardina G, Cutruzzola F [Pubmed: 38996576] [DOI: 10.1016/j.molcel.2024.06.016] |
3.9 TB | 3.52 Å | |
| 2023-06-23 | Heterogeneous non-canonical nucleosomes predominate in yeast cells in situ [multiple data sets in TIFF and MRC formats] | Tan ZY, Cai S, Noble AJ, Chen JK, Shi J, Gan L [DOI: 10.7554/eLife.87672.1] |
711.4 GB | 24.0 Å | |
| 2023-06-23 | Unaligned and aligned cryo-EM micrographs of 82-kDa malate synthase G [multiple data sets in TIFF format] | Wu K.-P. [Pubmed: 36997036] [DOI: 10.1016/j.jsb.2023.107958] |
227.3 GB | 2.89 - 4.14 Å | |
| 2023-06-23 | Hexameric human IgG3 Fc complex [stack of 1193 particles in MRC format] | Abendstein LA, Sharp THS [Pubmed: 37419978] [DOI: 10.1038/s41467-023-39788-5] |
25.9 GB | 14.0 Å | |
| 2023-06-23 | IgG3-C1-C4b complex on a lipid bilayer [stack of 2561 particles in MRC format] | Abendstein LA, Sharp THS [Pubmed: 37419978] [DOI: 10.1038/s41467-023-39788-5] |
160.1 GB | 29.0 - 44.0 Å | |
| 2023-06-23 | Dose weighted tilt series of ESCPE-1 membrane coats [57 tilt series in MRC format] | Castaño-Díez D [Pubmed: 37322239] [DOI: 10.1038/s41594-023-01014-7] |
117.4 GB | 10.0 Å | |
| 2023-06-23 | HIV-1 capsid lattice assembled on 30-nm liposome scaffolds in the presence of assembly cofactor IP6 (pH 6.2) [696 multi-frame micrographs composed of 50 frames each in TIFF format] | Highland CMH, Dick RAD [Pubmed: 37094124] [DOI: 10.1073/pnas.2220545120] |
2.0 TB | 3.3 Å | |
| 2023-06-20 | Cryo-EPty SPA at CSA of 1.03 mrad [29 micrographs in MRC format] | Pei X, Zhou L, Huang C, Boyce M, Kim JS, Liberti E, Hu Y, Sasaki T, Nellist PD, Zhang P, Stuart DI, Kirkland AI, Wang P [Pubmed: 37230988] [DOI: 10.1038/s41467-023-38268-0] |
262.0 MB | 37.2 Å | |
| 2023-06-20 | Cryo-EPty SPA at CSA of 3.26 mrad [22 micrographs in MRC format] | Pei X, Zhou L, Huang C, Boyce M, Kim JS, Liberti E, Hu Y, Sasaki T, Nellist PD, Zhang P, Stuart DI, Kirkland AI, Wang P [Pubmed: 37230988] [DOI: 10.1038/s41467-023-38268-0] |
2.1 GB | 32.9 Å | |
| 2023-06-20 | Cryo-EPty SPA at CSA of 4.83 mrad [22 micrographs in MRC format] | Pei X, Zhou L, Huang C, Boyce M, Kim JS, Liberti E, Hu Y, Sasaki T, Nellist PD, Zhang P, Stuart DI, Kirkland AI, Wang P [Pubmed: 37230988] [DOI: 10.1038/s41467-023-38268-0] |
3.9 GB | 18.6 Å | |
| 2023-06-19 | HIV-1 capsid lattice assembled on 30-nm liposome scaffolds in the presence of dNTPs [696 multi-frame micrographs composed of 50 frames each in TIFF format] | Highland CMH, Dick RAD [Pubmed: 37094124] [DOI: 10.1073/pnas.2220545120] |
1.5 TB | 3.5 Å | |
| 2023-06-19 | HIV-1 capsid lattice assembled on 30-nm liposome scaffolds in the presence of assembly cofactor IP6; bound to lenacapavir [696 multi-frame micrographs composed of 50 frames each in TIFF format] | Highland CMH, Dick RAD [Pubmed: 37094124] [DOI: 10.1073/pnas.2220545120] |
1.8 TB | 3.1 Å | |
| 2023-06-16 | HIV-1 capsid-like particles assembled from purified capsid protein and assembly cofactor IP6 [1487 multi-frame micrographs composed of 50 frames each in TIFF format] | Highland CMH, Dick RAD [Pubmed: 37094124] [DOI: 10.1073/pnas.2220545120] |
818.8 GB | 3.6 Å | |
| 2023-06-16 | HIV-1 capsid lattice assembled on 30-nm liposome scaffolds in the presence of assembly cofactor IP6 (pH 7.4) [696 multi-frame micrographs composed of 50 frames each in TIFF format] | Highland CMH, Dick RAD [Pubmed: 37094124] [DOI: 10.1073/pnas.2220545120] |
1.1 TB | 3.1 Å | |
| 2023-06-16 | Defective HIV-1 capsid lattice assembled on 30-nm liposome scaffolds in the absence of assembly cofactor IP6 [696 multi-frame micrographs composed of 50 frames each in TIFF format] | Highland CMH, Dick RAD [Pubmed: 37094124] [DOI: 10.1073/pnas.2220545120] |
456.4 GB | 7.1 Å | |
| 2023-06-13 | Escherichia coli gyrase holocomplex with 217 bp phage Mu SGS DNA and Albi-1 stabilised by ADPNP [8136 multi-frame micrographs composed of 40 frames each in TIFF format] | Michalczyk E, Ghilarov D [Pubmed: 36741192] [DOI: 10.1038/s41929-022-00904-1] |
2.9 TB | 3.25 - 3.3 Å |