Due to a storage failure, some data files are currently inaccessible (Markted: Incomplete dataset).
We are currently working to restore, but we are accepting priority requests.(email, inquiry).
We are restoring lost files from backups in the following order:
We apologize for the inconvenience and appreciate your understanding.
오사카 대학의 EMPIAR-PDBj 팀은, 아시아의 EM 연구자가 용량이 큰 EM 이미지를 EMPIAR 데이터베이스에 전송하는 것을 돕고 있습니다. 인터넷을 통하여 EBI (UK)에 직>접 데이터를 전송하는 대신, 이용자는 우편이나 택배를 통하여 하드 디스크를 오사카 대학으로 보내실 수 있습니다. 혹은 인터넷을 이용하여 오사카 대학의 서버로 전>송 하실 수 있습니다. 오사카 대학에 데이터 전송 서비스를 희망하시는 분은 데이터를 보내시기 전에 먼저 이메일 통하여 등록하시고 싶은 EM데이터에 관하여 상담하십시오.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2024-10-08 | Cryo-ET tilt series of an HPIV3 escape variant (EV1). [12 tilt series in MRC format] | Marcink TC [Pubmed: 39396053] [DOI: 10.1038/s41467-024-53082-y] |
42.1 GB | 12.2 Å | |
| 2024-10-08 | Cryo-ET tilt series of an HPIV3 escape variant mutation (F-L234F). [16 tilt series in MRC format] | Marcink TC [Pubmed: 39396053] [DOI: 10.1038/s41467-024-53082-y] |
49.2 GB | 12.8 Å | |
| 2024-10-08 | Full-length mouse 5-HT3A receptor in complex with ALB148471, pre-activated and open-like [6312 multi-frame micrographs composed of 55 frames each in TIFF format] | Felt KCF, Chakrapani SC [Pubmed: 38177669] [DOI: 10.1038/s41594-023-01140-2] |
3.9 TB | 2.92 - 3.79 Å | |
| 2024-10-04 | Electron tomograms of high-pressure frozen-freeze substituted multivesicular endosomes [68 reconstructed volumes in MRC format] | Weiner E, Berryman E, Frey F, Gonzalez Solís A, Leier A, Marquez Lago T, Šarić A, Otegui MS | 66.2 GB | — | |
| 2024-10-01 | Cryo-ET tilt series of an HPIV3 escape variant (EV2). [12 tilt series in MRC format] | Marcink TC [Pubmed: 39396053] [DOI: 10.1038/s41467-024-53082-y] |
36.2 GB | 13.2 Å | |
| 2024-09-26 | Cryo-EM structure of uropathogenic Escherichia coli CysK:CdiA:tRNA complex [7044 multi-frame micrographs composed of 50 frames each in TIFF format] | Feng Z, Yashiro Y, Tomita K [Pubmed: 39228374] [DOI: 10.1093/nar/gkae735] |
1.5 TB | 2.6 - 3.04 Å | |
| 2024-09-26 | SBF SEM images of a notoroid in transverse orientation (Fig S24) [multiple data sets in DM4 and TIFF formats] | Marie-Charlotte Domart MCD, Lucy M Collinson LMC [DOI: 10.1038/s41586-024-08332-w] |
11.5 GB | — | |
| 2024-09-26 | SBF SEM images of a notoroid in longitudinal orientation containing TNE-ZsGreen+ notochord cells (Fig S26 part 1) [multiple data sets in DM4 and TIFF formats] | Marie-Charlotte Domart MCD, Lucy M Collinson LMC [DOI: 10.1038/s41586-024-08332-w] |
170.0 GB | — | |
| 2024-09-26 | SBF SEM images of a notoroid in longitudinal orientation containing TNE-ZsGreen+ notochord cells (Fig S26 part 2) [multiple data sets in DM4 and TIFF formats] | Marie-Charlotte Domart MCD, Lucy M Collinson LMC [DOI: 10.1038/s41586-024-08332-w] |
232.5 GB | — | |
| 2024-09-26 | SBF SEM images of a notoroid in longitudinal orientation containing TNE-ZsGreen+ notochord cells (Fig S26 part 3) [multiple data sets in DM4 and TIFF formats] | Marie-Charlotte Domart MCD, Lucy M Collinson LMC [DOI: 10.1038/s41586-024-08332-w] |
39.2 GB | — | |
| 2024-09-23 | FAST-EM array tomography data of wild-type MCF-7 cells prepared with the rOTO protocol and stained with uranyl acetate [5595 micrographs in TIFF format] | Kievits AJ, Duinkerken BHP, Lane R, de Heus C, van Beijeren Bergen en Henegouwen D, Höppener T, Wolters AHG, Liv N, Giepmans BNG, Hoogenboom JP | 561.3 GB | — | |
| 2024-09-15 | Human DNA polymerase alpha/primase - AavLEA1 (1:8 molar ratio) [2764 multi-frame micrographs composed of 53 frames each in TIFF format] | Abe KM, Li G, He Q, Grant T, Lim C [Pubmed: 39231985] [DOI: 10.1038/s41467-024-52091-1] |
843.0 GB | 3.63 Å | |
| 2024-09-15 | Cryo-EM structure of HflX bound to the Listeria monocytogenes 50S ribosomal subunit [4480 multi-frame micrographs composed of 20 frames each in TIFF format] | Koller TO, Wilson DN [Pubmed: 36300626] [DOI: 10.1093/nar/gkac934] |
320.2 GB | 2.1 - 3.1 Å | |
| 2024-09-06 | Cryo-electron tomography of Polyphosphate condensate [35 tilt series in MRC format] | Racki LR, Deniz AA, Park D [Pubmed: 39462120] [DOI: 10.1038/s41467-024-53469-x] |
267.4 GB | — | |
| 2024-09-06 | Human DNA polymerase alpha/primase - AavLEA1 (1:40 molar ratio) [4403 multi-frame micrographs composed of 40 frames each in TIFF format] | Abe KM, Li G, He Q, Grant T, Lim C [Pubmed: 39231985] [DOI: 10.1038/s41467-024-52091-1] |
1.1 TB | 2.98 Å | |
| 2024-09-06 | Human DNA polymerase alpha/primase - RvLEAM(short) (1:6 molar ratio) [1308 multi-frame micrographs composed of 50 frames each in TIFF format] | Abe KM, Li G, He Q, Grant T, Lim CJ [Pubmed: 39231985] [DOI: 10.1038/s41467-024-52091-1] |
354.8 GB | 4.47 Å | |
| 2024-09-06 | Human DNA polymerase alpha/primase - 4 mM CHAPSO [4567 multi-frame micrographs composed of 40 frames each in TIFF format] | Abe KM, Li G, He Q, Grant T, Lim CJ [Pubmed: 39231985] [DOI: 10.1038/s41467-024-52091-1] |
1.0 TB | 3.39 Å | |
| 2024-09-06 | Human PRC2- AavLEA1 (1:40 molar ratio) [2843 multi-frame micrographs composed of 40 frames each in TIFF format] | Abe KM, Li G, He Q, Grant T, Lim CJ [Pubmed: 39231985] [DOI: 10.1038/s41467-024-52091-1] |
736.5 GB | 3.82 Å | |
| 2024-09-06 | Human PRC2 - RvLEAM (short) (1:6 molar ratio) [3896 multi-frame micrographs composed of 40 frames each in TIFF format] | Abe KM, Li G, He Q, Grant T, Lim CJ [Pubmed: 39231985] [DOI: 10.1038/s41467-024-52091-1] |
1.0 TB | 3.76 Å | |
| 2024-09-06 | Human PRC2 - RvLEAM (short) (1:6 molar ratio), cross-linked 2 min [2981 multi-frame micrographs composed of 51 frames each in TIFF format] | Abe KM, Li G, He Q, Grant T, Lim CJ | 824.4 GB | 3.47 Å | |
| 2024-09-06 | Human PRC2 - RvLEAM (short) (1:6 molar ratio), cross-linked 10 min [3432 multi-frame micrographs composed of 40 frames each in TIFF format] | Abe KM, Li G, He Q, Grant T, Lim CJ [Pubmed: 39231985] [DOI: 10.1038/s41467-024-52091-1] |
943.0 GB | 3.1 Å | |
| 2024-09-06 | cryo electron microscopy unaligned movie frames for single particle analysis of the Escherichia coli 70S ribosome with Paenilamicin B2 [7638 multi-frame micrographs composed of 1050 frames each in EER format] | Koller TO, Berger MJ, Morici M, Beckert B [Pubmed: 38826346] [DOI: 10.1101/2024.05.21.595107] |
4.3 TB | 2.2 - 2.4 Å | |
| 2024-09-06 | Cryo-EM structure of the full-length Pseudomonas aeruginosa bacteriophytochrome in its Pfr and Pr states [multiple data sets in TIFF and MRC formats] | Bodizs SB, Westenhoff SW [DOI: 10.1016/j.str.2024.08.008] |
19.3 TB | 2.95 Å | |
| 2024-09-06 | Human PRC2 - cross-linked 10 min [3274 multi-frame micrographs composed of 40 frames each in TIFF format] | Abe KM, Li G, He Q, Grant T, Lim CJ | 817.0 GB | 4.29 Å | |
| 2024-09-06 | Human PRC2 - RvLEAM(short) (1:6 molar ratio), 10 mM MgCl2 [4333 micrographs in MRC format] | Abe KM, Li G, He Q, Grant T, Lim C | 380.5 GB | 4.18 Å |