오사카 대학의 EMPIAR-PDBj 팀은, 아시아의 EM 연구자가 용량이 큰 EM 이미지를 EMPIAR 데이터베이스에 전송하는 것을 돕고 있습니다. 인터넷을 통하여 EBI (UK)에 직>접 데이터를 전송하는 대신, 이용자는 우편이나 택배를 통하여 하드 디스크를 오사카 대학으로 보내실 수 있습니다. 혹은 인터넷을 이용하여 오사카 대학의 서버로 전>송 하실 수 있습니다. 오사카 대학에 데이터 전송 서비스를 희망하시는 분은 데이터를 보내시기 전에 먼저 이메일 통하여 등록하시고 싶은 EM데이터에 관하여 상담하십시오.
Release date | Imageset | Title | Authors and references | Size | Resolution |
---|---|---|---|---|---|
2022-03-28 | Cryo-EM structure of SARS-CoV-2 Main protease C145S in complex with N-terminal peptide [multiple data sets in MRCS and TIFF formats] | Godoy AS, Song Y, Noske GD, Oliva G | 3.3 TB | 3.5 Å | |
2022-03-28 | Representative data from Near-native state imaging by cryo-soft-X-ray tomography reveals remodelling of cytoplasmic vesicles and mitochondria during HSV-1 infection [14 reconstructed volumes in MRC format] | Nahas KLN, Connor VC, Scherer KM, Kaminski CF, Harkiolaki M, Crump CM, Graham SC [DOI: 10.1101/2021.10.11.463900] |
9.9 GB | — | |
2022-03-22 | High-resolution Cryo-EM of Fab-labeled human parechovirus 3 [6759 multi-frame micrographs composed of 16 frames each in MRCS format] | Domanska A, Flatt JW, Jukonen JJJ, Geraets JA, Butcher SJ [Pubmed: 30463974] [DOI: 10.1128/JVI.01597-18] |
1.5 TB | 2.8 Å | |
2022-03-21 | Structure of the GPCR dimer Ste2 bound to an antagonist [15751 multi-frame micrographs composed of 59 frames each in TIFF format] | Velazhahan V, Tate CG [Pubmed: 35296853] [DOI: 10.1038/s41586-022-04498-3] |
4.1 TB | 2.7 Å | |
2022-03-21 | Structure of the ligand-free GPCR dimer Ste2 [9369 multi-frame micrographs composed of 53 frames each in EER format] | Velazhahan V, Tate CG [Pubmed: 35296853] [DOI: 10.1038/s41586-022-04498-3] |
8.2 TB | 3.1 Å | |
2022-03-21 | Structure of the agonist-bound GPCR dimer Ste2 [6944 multi-frame micrographs composed of 50 frames each in MRC format] | Velazhahan V, Tate CG [Pubmed: 35296853] [DOI: 10.1038/s41586-022-04498-3] |
1.3 TB | 3.46 - 3.53 Å | |
2022-03-21 | CryoEM of PreP prepared via Chameleon [multiple data sets in TIFF and MRC formats] | Liang WG, Wijaya J, Wei H, Noble AJ, Mancl JM, Mo S, Lee D, Lin King JV, Pan M, Liu C, Koehler CM, Zhao M, Potter CS, Carragher B, Li S, Tang WJ [Pubmed: 35383169] [DOI: 10.1038/s41467-022-29322-4] |
2.2 TB | 3.3 - 4.6 Å | |
2022-03-21 | CryoEM Structure of mGlu2 - Gi Complex [45341 multi-frame micrographs composed of 50 frames each in TIFF format] | Seven AB, Barros-Alvarez X, Skiniotis G [Pubmed: 34194039] [DOI: 10.1038/s41586-021-03680-3] |
21.6 TB | 3.2 Å | |
2022-03-21 | CryoET of E. coli prepared with the Waffle Method [1504 multi-frame micrographs composed of 14 frames each in TIFF format] | Kelley K, Raczkowski AM, Klykov O, Jaroenlak P, Bobe D, Kopylov M, Eng ET, Bhabha G, Potter CS, Carragher B, Noble AJ [Pubmed: 35387991] [DOI: 10.1038/s41467-022-29501-3] |
94.0 GB | — | |
2022-03-15 | Cryo-EM structure of human RNA polymerase I in elongation state [10053 multi-frame micrographs composed of 38 frames each in TIFF format] | Misiaszek AD, Girbig M, Müller CW [Pubmed: 34887565] [DOI: 10.1038/s41594-021-00693-4] |
3.6 TB | 2.7 Å | |
2022-03-15 | Cryo-EM structure of human RNA polymerase I Open Complex and in complex with RRN3 [14224 multi-frame micrographs composed of 40 frames each in TIFF format] | Misiaszek AD, Girbig M, Müller CW [Pubmed: 34887565] [DOI: 10.1038/s41594-021-00693-4] |
2.2 TB | 3.1 - 3.3 Å | |
2022-03-15 | CryoEM Structure of Full-Length mGlu2 in Inactive-State Bound to Antagonist LY341495 [6613 multi-frame micrographs composed of 50 frames each in TIFF format] | Seven AB, Barros-Alvarez X, Skiniotis G [Pubmed: 34194039] [DOI: 10.1038/s41586-021-03680-3] |
3.2 TB | 3.65 Å | |
2022-03-15 | CryoEM Structure of Full-Length mGlu2 Bound to Ago-PAM ADX55164 and Glutamate [7011 multi-frame micrographs composed of 50 frames each in TIFF format] | Seven AB, Barros-Alvarez X, Skiniotis G [Pubmed: 34194039] [DOI: 10.1038/s41586-021-03680-3] |
3.5 TB | 3.3 Å | |
2022-03-15 | Seven benchmark datasets of instance segmentation of mitochondria: 6 diverse volume EM + 1 TEM (100 images) datasets [multiple data sets in TIFF format] | Narayan K, Conrad RW | 4.1 GB | — | |
2022-03-14 | Movies of a photosynthetic reaction centre - double light-harvesting 1 complex from the bacterium G. phototrophica [19815 multi-frame micrographs composed of 20 frames each in MRCS format] | Qian P, Gardiner AT, Šímová I, Naydenova K, Croll TI, Jackson PJ, Nupur N, Kloz M, Čubáková P, Kuzma M, Zeng Y, Castro-Hartmann P, van Knippenberg B, Goldie KN, Kaftan D, Hrouzek P, Hájek J, Agirre J, Siebert CA, Bína D, Sader K, Stahlberg H, Sobotka R, Russo CJ, Polívka T, Hunter CN, Koblížek M [Pubmed: 35171663] [DOI: 10.1126/sciadv.abk3139] |
6.6 TB | 2.35 - 2.5 Å | |
2022-03-14 | Marburgvirus nucleoprotein RNA complex [2469 multi-frame micrographs composed of 80 frames each in TIFF format] | Fujita-Fujiharu Y, Sugita Y, Takamatsu Y, Houri K, Igarashi M, Muramoto Y, Nakano M, Tsunoda Y, Taniguchi I, Becker S, Noda T [Pubmed: 35246537] [DOI: 10.1038/s41467-022-28802-x] |
3.3 TB | 3.1 Å | |
2022-03-14 | Cryo-EM of the human insulin receptor ectodomain in complex with an insulin analog with truncated B chain and enlongated A chain [multiple data sets in MRC format] | Xiong X, Blakely A, Kim JH, Menting JG, Schäfer IB, Schubert HL, Agrawal R, Gutmann T, Delaine C, Zhang YW, Artik GO, Merriman A, Eckert D, Lawrence MC, Coskun Ü, Fisher SJ, Forbes BE, Safavi-Hemami H, Hill CP, Chou DH [Pubmed: 35289328] [DOI: 10.1038/s41589-022-00981-0] |
2.2 TB | 3.4 - 4.4 Å | |
2022-03-14 | Cryogenic electron microscopy of somatostatin receptor 2/SST14/Gi3 complex [9740 multi-frame micrographs composed of 50 frames each in TIFF format] | Robertson MJ [Pubmed: 35210615] [DOI: 10.1038/s41594-022-00727-5] |
4.5 TB | 2.5 Å | |
2022-03-14 | Cryogenic electron microscopy of somatostatin receptor 2/Octreotide/Gi3 complex [7576 multi-frame micrographs composed of 55 frames each in TIFF format] | Robertson MJ, Panova O [Pubmed: 35210615] [DOI: 10.1038/s41594-022-00727-5] |
4.2 TB | 2.7 Å | |
2022-03-14 | SBF SEM of Human term placental villi [multiple data sets in TIFF format] | Lewis RM [DOI: 10.1101/2022.01.26.477815] |
90.2 GB | — | |
2022-03-14 | 2.1Å T20S Proteosome from 200kV Glacios with Selectris Falcon 4 [4075 multi-frame micrographs composed of 854 frames each in EER format] | Koh FA, Khavnekar K, Kotecha A [Pubmed: 35377368] [DOI: 10.3791/63519] |
1.5 TB | 2.1 Å | |
2022-03-11 | Cryo-EM reconstruction of TMEM106B fold I-d filaments from case 18 with multiple system atrophy [5697 multi-frame micrographs composed of 54 frames each in TIFF format] | Schweighauser M, Arseni D, Bacioglu M, Huang M, Lövestam S, Shi Y, Yang Y, Zhang W, Kotecha A, Garringer HJ, Vidal R, Hallinan GI, Newell KL, Tarutani A, Murayama S, Miyazaki M, Saito Y, Yoshida M, Hasegawa K, Lashley T, Revesz T, Kovacs GG, van Swieten J, Takao M, Hasegawa M, Ghetti B, Spillantini MG, Ryskeldi-Falcon B, Murzin AG, Goedert M, Scheres SHW [Pubmed: 35344985] [DOI: 10.1038/s41586-022-04650-z] |
1.0 TB | 3.64 Å | |
2022-03-08 | Structure of negative allosteric modulator-bound inactive human calcium-sensing receptor [15464 multi-frame micrographs composed of 50 frames each in TIFF format] | Park J, Zuo H, Frangaj A, Fu Z, Yen LY, Zhang Z, Mosyak L, Slavkovich VN, Liu J, Ray KM, Cao B, Vallese F, Geng Y, Chen S, Grassucci R, Dandey VP, Tan YZ, Eng E, Lee Y, Kloss B, Liu Z, Hendrickson WA, Potter CS, Carragher B, Graziano J, Conigrave AD, Frank J, Clarke OB, Fan QR [Pubmed: 34916296] [DOI: 10.1073/pnas.2115849118] |
4.0 TB | 5.9 Å | |
2022-03-08 | Tutorial for high-throughput cryo-EM structure determination of amyloids: Dataset 2 [4000 multi-frame micrographs composed of 34 frames each in TIFF format] | Lövestam S, Scheres SHW [Pubmed: 35244536] [DOI: 10.7554/eLife.76494] |
1.5 TB | 1.92 Å | |
2022-03-07 | A biological nano-foam: the wall of coniferous bisaccate pollen (data sets) [multiple data sets in TIFF and JPEG formats] | Cojocaru R, Mannix O, Capron M, Miller CG, Jouneau PH, Gallet B, Falconet D, Pacureanu A, Stukins S [Pubmed: 35138906] [DOI: 10.1126/sciadv.abd0892] |
25.2 GB | — |