Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
오사카 대학의 EMPIAR-PDBj 팀은, 아시아의 EM 연구자가 용량이 큰 EM 이미지를 EMPIAR 데이터베이스에 전송하는 것을 돕고 있습니다. 인터넷을 통하여 EBI (UK)에 직>접 데이터를 전송하는 대신, 이용자는 우편이나 택배를 통하여 하드 디스크를 오사카 대학으로 보내실 수 있습니다. 혹은 인터넷을 이용하여 오사카 대학의 서버로 전>송 하실 수 있습니다. 오사카 대학에 데이터 전송 서비스를 희망하시는 분은 데이터를 보내시기 전에 먼저 이메일 통하여 등록하시고 싶은 EM데이터에 관하여 상담하십시오.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2023-01-30 |  |
Integration of an event-driven Timepix3 hydrid pixel detector into a cryo-EM workflow [multiple data sets in MRCS and TPX3 formats] | van Schayck JP, Zhang Y, Knoops K, Peters PJ, Ravelli RBG [DOI: 10.1093/micmic/ozac009] |
2.7 TB | 3.05 Å |
| 2023-01-30 |  |
Structure of RecT protein from Listeria innoccua phage A118 in complex with 83-mer annealed duplex [2038 multi-frame micrographs composed of 36 frames each in MRC format] | Bell CE [Pubmed: 36543802] [DOI: 10.1038/s41467-022-35572-z] |
1.6 TB | 3.4 Å |
| 2023-01-30 |  |
Single particle cryo-EM dataset for E. coli MlaFEDB bound to MlaC [multiple data sets in MRC and TIFF formats] | MacRae MR, Coudray N, Bhabha G, Ekiert DC [Pubmed: 37100290] [DOI: 10.1016/j.jbc.2023.104744] |
5.0 TB | 6.6 Å |
| 2023-01-30 |  |
ChRmine in MSP1E3D1 lipid nanodisc [10903 multi-frame micrographs composed of 50 frames each in TIFF format] | Tucker K, Sridharan S, Adesnik H, Brohawn SG [Pubmed: 35977941] [DOI: 10.1038/s41467-022-32441-7] |
7.0 TB | 2.74 Å |
| 2023-01-30 |  |
Translating 70S ribosome [19449 multi-frame micrographs composed of 1295 frames each in EER format] | Fromm SA, O'Connor KM, Purdy M, Bhatt PR, Loughran G, Atkins JF, Jomaa A, Mattei S [Pubmed: 36841832] [DOI: 10.1038/s41467-023-36742-3] |
7.1 TB | 1.55 Å |
| 2023-01-30 |  |
Cryogenic electron tomographs of Coxsackievirus A9 [2421 multi-frame micrographs composed of 30 frames each in MRC format] | Domanska A, Plavec Z, Ruokolainen V, Löflund B, Marjomäki V, Butcher SJ [Pubmed: 36448797] [DOI: 10.1128/jvi.01367-22] |
2.1 TB | 2.9 Å |
| 2023-01-30 |  |
3D-surface reconstruction of cellular cryo-soft X-ray microscopy tomograms using semi-supervised deep learning [7 reconstructed volumes in MRC format] | Dyhr MCA, Sadeghi M, Moynova R, Knappe C, Kepsutlu Çakmak B, Werner S, Schneider G, McNally J, Noe F, Ewers H [DOI: 10.1101/2022.05.16.492055] |
23.5 GB | — |
| 2023-01-26 |  |
Apo-ChRmine in MSP1E3D1 lipid nanodisc [5339 multi-frame micrographs composed of 50 frames each in TIFF format] | Tucker KCT, Brohawn SGB [Pubmed: 35977941] [DOI: 10.1038/s41467-022-32441-7] |
3.5 TB | 4.1 Å |
| 2023-01-25 |  |
Ubiquitinated FANCI in complex with FANCD2 and double-stranded DNA [multiple data sets in TIFF format] | Lemonidis K, Rennie ML, Arkinson C, Chaugule VK, Clarke M, Streetley J, Walden H [Pubmed: 36385258] [DOI: 10.15252/embj.2022111898] |
2.9 TB | 4.14 Å |
| 2023-01-20 |  |
Movies for human CST-Pola-primase bound to 3xTEL DNA template [6252 multi-frame micrographs composed of 40 frames each in TIFF format] | He Q, Lin X, Chavez BL, Agrawal S, Lusk BL, Lim C [Pubmed: 35830881] [DOI: 10.1038/s41586-022-05040-1] |
1.5 TB | 3.61 - 3.62 Å |
| 2023-01-20 |  |
Movies for human CST-Pola-primase bound to 6xTEL DNA template [8658 multi-frame micrographs composed of 40 frames each in TIFF format] | He Q, Lin X, Chavez BL, Agrawal S, Lusk BL, Lim C [Pubmed: 35830881] [DOI: 10.1038/s41586-022-05040-1] |
1.9 TB | 3.69 Å |
| 2023-01-20 |  |
Movies for human CST-Pola-primase bound to 4xTEL-FB DNA template (PIC and advanced PIC) [7799 multi-frame micrographs composed of 40 frames each in TIFF format] | He Q, Lin X, Chavez BL, Agrawal S, Lusk BL, Lim C [Pubmed: 35830881] [DOI: 10.1038/s41586-022-05040-1] |
1.6 TB | 3.43 - 4.27 Å |
| 2023-01-20 |  |
Cryogenic electron tomographs of Coxsackievirus A9 treated with endosomal ionic condition buffer [1964 multi-frame micrographs composed of 30 frames each in MRC format] | Domanska A, Plavec Z, Ruokolainen V, Löflund B, Marjomäki V, Butcher SJ [Pubmed: 36448797] [DOI: 10.1128/jvi.01367-22] |
1.8 TB | 3.3 Å |
| 2023-01-19 |  |
Cryo-EM structure of the RhlR-PqsE complex from Pseudomonas aeruginosa [multiple data sets in TIFF and MRCS formats] | Feathers JR, Fromme JC, Paczkowski JE [Pubmed: 36379213] [DOI: 10.1016/j.str.2022.10.008] |
2.0 TB | 3.74 - 4.1 Å |
| 2023-01-19 |  |
Cryo Electron Microscopy of CHMP1B/IST1 Membrane-Bound Filaments with Brominated Lipid Probes [multiple data sets in MRC format] | Moss FR, Lincoff J, Tucker M, Mohammed A, Grabe M, Frost A [Pubmed: 36624348] [DOI: 10.1038/s41594-022-00898-1] |
3.7 TB | 2.8 - 9.5 Å |
| 2023-01-19 |  |
Cryogenic electron tomographs of Coxsackievirus A9 treated with fatty-acid-free BSA [2472 multi-frame micrographs composed of 30 frames each in MRC format] | Domanska A, Plavec Z, Ruokolainen V, Löflund B, Marjomäki V, Butcher SJ [Pubmed: 36448797] [DOI: 10.1128/jvi.01367-22] |
2.3 TB | 3.5 Å |
| 2023-01-19 |  |
Human heparan sulfate polymerase complex EXT1-EXT2 [7046 micrographs in MRC format] | Leisico F, Omeiri J, Hons M, Schoehn G, Lortat-Jacob H, Wild R [Pubmed: 36402845] [DOI: 10.1038/s41467-022-34882-6] |
618.7 GB | 2.8 Å |
| 2023-01-18 |  |
Cryo iDPC-STEM single particle analysis of keyhole limpet hemocyanin [multiple data sets in TIFF format] | Mann DM, Lazic I, Wirix M, de Haas F [Pubmed: 36064775] [DOI: 10.1038/s41592-022-01586-0] |
42.9 GB | 6.51 Å |
| 2023-01-18 |  |
Tilt series of cell-cell contact of two PTK-1 cells [35 tilt series in MRC format] | Lemos M, Bezault A, Sauvanet C, Hanein D, Volkmann N [Pubmed: 36539423] [DOI: 10.1038/s41467-022-35409-9] |
1.1 GB | — |
| 2023-01-18 |  |
Movies of apoferritin collected at different dose rates on the Direct Electron Apollo direct detector - 30 eps [1478 multi-frame micrographs composed of 40 frames each in TIFF format] | Peng R, Fu X, Mendez JH, Randolph PS, Bammes BE, Stagg SM [Pubmed: 36578473] [DOI: 10.1016/j.yjsbx.2022.100080] |
348.5 GB | — |
| 2023-01-18 |  |
Multishot Tomography for High-Resolution In Situ Subtomogram Averaging: RiboProt singleshot [39 tilt series in MRC format] | Khavnekar S, Erdmann PSE, Plitzko J [Pubmed: 36343843] [DOI: 10.1016/j.jsb.2022.107911] |
122.2 GB | 4.7 - 7.8 Å |
| 2023-01-18 |  |
Multishot Tomography for High-Resolution In Situ Subtomogram Averaging: RiboProt multishot (2 shots) [26 tilt series in MRC format] | Khavnekar S, Erdmann PSE, Plitzko J [Pubmed: 36343843] [DOI: 10.1016/j.jsb.2022.107911] |
78.0 GB | 4.7 - 8.3 Å |
| 2023-01-18 |  |
Multishot Tomography for High-Resolution In Situ Subtomogram Averaging: E.coli cryo-FIB lamellae multishot [30 tilt series in MRC format] | Khavnekar S, Erdmann PS, Plitzko JM [Pubmed: 36343843] [DOI: 10.1016/j.jsb.2022.107911] |
90.7 GB | 8.8 Å |
| 2023-01-18 |  |
Organizing Structural Principles of the Interleukin-17 Ligand-Receptor Axis [multiple data sets in TIFF format] | Caveney NA, Wilson SC, Garcia KC [Pubmed: 35863378] [DOI: 10.1038/s41586-022-05116-y] |
17.7 TB | 2.5 - 4.4 Å |
| 2023-01-17 |  |
Movies of apoferritin collected at different dose rates on the Direct Electron Apollo direct detector - 60 eps [869 multi-frame micrographs composed of 20 frames each in TIFF format] | Peng R, Fu X, Mendez JH, Randolph PS, Bammes BE, Stagg SM [Pubmed: 36578473] [DOI: 10.1016/j.yjsbx.2022.100080] |
154.5 GB | 1.68 Å |
