Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
오사카 대학의 EMPIAR-PDBj 팀은, 아시아의 EM 연구자가 용량이 큰 EM 이미지를 EMPIAR 데이터베이스에 전송하는 것을 돕고 있습니다. 인터넷을 통하여 EBI (UK)에 직>접 데이터를 전송하는 대신, 이용자는 우편이나 택배를 통하여 하드 디스크를 오사카 대학으로 보내실 수 있습니다. 혹은 인터넷을 이용하여 오사카 대학의 서버로 전>송 하실 수 있습니다. 오사카 대학에 데이터 전송 서비스를 희망하시는 분은 데이터를 보내시기 전에 먼저 이메일 통하여 등록하시고 싶은 EM데이터에 관하여 상담하십시오.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2023-10-23 |  |
The cryo-EM structure of the human DNMT3A2-DNMT3B3 complex bound to nucleosome [12438 multi-frame micrographs composed of 40 frames each in TIFF format] | Xu TH, Liu M, Zhou XE, Liang G, Zhao G, Xu HE, Melcher K, Jones PA [Pubmed: 32968275] [DOI: 10.1038/s41586-020-2747-1] |
4.2 TB | 2.94 Å |
| 2023-10-23 |  |
The cryo-EM structure of the human DNMT3A2-DNMT3B3 complex bound to NCP_Kc36me3. [1504 multi-frame micrographs composed of 40 frames each in TIFF format] | Xu TH, Liu M, Zhou EX, Liang G, Zhao G, Xu HE, Melcher K, Jones PA [Pubmed: 32968275] [DOI: 10.1038/s41586-020-2747-1] |
583.5 GB | 4.26 Å |
| 2023-10-20 |  |
Cryo-EM of AtMSL10 G556V [3647 multi-frame micrographs composed of 42 frames each in MRC format] [3647 multi-frame micrographs composed of 42 frames each in MRC format] | Zhang J, Yuan P [Pubmed: 37805510] [DOI: 10.1038/s41467-023-42117-5] |
2.8 TB | 3.5 Å |
| 2023-10-20 |  |
Regularisation by denoising lowers the size barrier of cryo-EM structure determination [multiple data sets in MRC and MRCS formats] | Lövestam S | 81.5 GB | 2.0 Å |
| 2023-10-18 |  |
Cryo-EM of the wild-type AtMSL10 in GDN [3828 multi-frame micrographs composed of 48 frames each in MRC format] [3828 multi-frame micrographs composed of 48 frames each in MRC format] | Zhang J, Yuan P [Pubmed: 37805510] [DOI: 10.1038/s41467-023-42117-5] |
3.3 TB | 3.7 Å |
| 2023-10-18 |  |
Cryo-EM of the wild-type AtMSL10 in saposin [2120 multi-frame micrographs composed of 46 frames each in MRC format] [2120 multi-frame micrographs composed of 46 frames each in MRC format] | Zhang J, Yuan P [Pubmed: 37805510] [DOI: 10.1038/s41467-023-42117-5] |
1.8 TB | 3.6 Å |
| 2023-10-18 |  |
Cryo-EM of AtMSL10 K539E [3229 multi-frame micrographs composed of 42 frames each in MRC format] [3229 multi-frame micrographs composed of 42 frames each in MRC format] | Zhang J, Yuan P [Pubmed: 37805510] [DOI: 10.1038/s41467-023-42117-5] |
2.5 TB | 3.7 Å |
| 2023-10-17 |  |
Soft X-ray Cryo Tomography of Trypanosoma [180 reconstructed volumes in MRC format] | Darrow MC [Pubmed: 28246039] [DOI: 10.1016/j.jsb.2017.02.007] |
1.5 GB | — |
| 2023-10-17 |  |
3D reconstructions of parasite development and the intracellular niche of the microsporidian pathogen E. intestinalis [multiple data sets in DM4 format] | Antao NVA, Lam CKL, Davydov AD, Riggi MR, Sall JS, Petzold CP, Liang FL, Iwasa JI, Ekiert DCE, Bhabha GB [Pubmed: 37425741] [DOI: 10.1101/2023.07.02.547383] |
537.9 GB | — |
| 2023-10-17 |  |
Cryo-EM structure of human Anion Exchanger 1 [7009 multi-frame micrographs composed of 40 frames each in MRC format] | Capper MJ, Yang S, Stone AC, Vatansever S, Zilberg G, Mathiharan YK, Habib R, Hutchinson K, Zhao Y, Schlessinger A, Mezei M, Osman R, Zhang B, Wacker D [Pubmed: 37679563] [DOI: 10.1038/s41594-023-01085-6] |
615.4 GB | 2.99 Å |
| 2023-10-13 |  |
cryo-EM structure of a broadly neutralizing anti-SARS-CoV-2 antibody STI-9167 [20590 micrographs in MRC format] | Bajic G [Pubmed: 38054729] [DOI: 10.1128/mbio.02477-23] |
1.8 TB | 3.16 Å |
| 2023-10-13 |  |
SBF-SEM micrographs of A. algerae microsporidia spores, 5 min germination [1215 micrographs in TIFF format] | Davydov A, Jaroenlak P, Ekiert D, Bhabha G [DOI: 10.7554/eLife.86638.1] |
226.3 GB | — |
| 2023-10-13 |  |
SBF-SEM micrographs of A. algerae microsporidia spores, 45 min germination [300 micrographs in TIFF format] | Davydov A, Jaroenlak P, Ekiert D, Bhabha G [DOI: 10.7554/eLife.86638.1] |
55.9 GB | — |
| 2023-10-13 |  |
Single-particle cryo-EM of APC/C-CDH1-UBE2C-UBE2S-Ubiquitin-CyclinB-NTD [25837 multi-frame micrographs composed of 39 frames each in TIFF format] | Bodrug T, Welsh KA, Bolhuis DL, Paulаkonis E, Martinez-Chacin RC, Liu B, Pinkin N, Bonacci T, Cui L, Xu P, Roscow O, Amann SJ, Grishkovskaya I, Emanuele MJ, Harrison JS, Steimel JP, Hahn KM, Zhang W, Zhong ED, Haselbach D, Brown NG [Pubmed: 37735619] [DOI: 10.1038/s41594-023-01105-5] |
22.8 TB | 3.5 Å |
| 2023-10-13 |  |
Structure of the peroxisomal Pex1/Pex6 ATPase complex bound to a substrate [multiple data sets in TIFF format] | Rüttermann MR, Koci MK, Lill PL, Geladas EDG, Kaschani FK, Klink BUK, Erdmann RE, Gatsogiannis CG [Pubmed: 37741838] [DOI: 10.1038/s41467-023-41640-9] |
4.9 TB | 4.1 - 4.7 Å |
| 2023-10-13 |  |
CryoEM micrographs collected on a RAD51-ATP-dsDNA filament sample [3850 multi-frame micrographs composed of 40 frames each in TIFF format] | Appleby R, Bollschweiler D, Chirgadze DY, Joudeh L, Pellegrini L [Pubmed: 37216117] [DOI: 10.1016/j.isci.2023.106689] |
960.3 GB | 2.9 Å |
| 2023-10-10 |  |
SBF-SEM micrographs of A. algerae spores, Ungerminated [250 micrographs in TIFF format] | Jaroenlak P, Cammer M, Davydov A, Sall J, Usmani M, Liang F, Ekiert D, Bhabha G [Pubmed: 32946515] [DOI: 10.1371/journal.ppat.1008738] |
46.6 GB | — |
| 2023-10-10 |  |
EM ladder: four-species cryoEM protein mix for workflow and algorithm benchmarking: Apoferritin, beta-galactosidase, PP7 VLPs and TMV [1862 micrographs in MRC format] | Bobe D, Eng E, Kopylov M | 98.7 GB | 2.38 - 3.36 Å |
| 2023-10-09 |  |
Cryo-EM SPA datasets for Antibodies 12-16 & 12-19 in complex with prefusion SARS-CoV-2 Spike glycoprotein (K3 movies/.tif files) [multiple data sets in TIFF format] | Casner RG, Shapiro L [Pubmed: 37776849] [DOI: 10.1016/j.immuni.2023.09.003] |
2.6 TB | 3.03 - 3.09 Å |
| 2023-10-09 |  |
Quantitative subcellular reconstruction reveals a lipid mediated inter-organelle biogenesis network [multiple data sets in TIFF format] | Lee RG, Rudler DL, Raven SA, Peng L, Chopin A, Moh ESX, McCubbin T, Siira SJ, Fagan SV, DeBono NJ, Stentenbach M, Browne J, Rackham FF, Li J, Simpson KJ, Marcellin E, Packer NH, Reid GE, Padman BS, Rackham O, Filipovska A | 434.2 GB | — |
| 2023-10-06 |  |
CryoEM micrographs collected on a RAD51-ADP filament sample [9214 multi-frame micrographs composed of 50 frames each in TIFF format] | Appleby R, Bollschweiler D, Chirgadze DY, Joudeh L, Pellegrini L [Pubmed: 37216117] [DOI: 10.1016/j.isci.2023.106689] |
1.5 TB | 3.6 Å |
| 2023-10-06 |  |
Extracellular filaments of Pyrobaculum calidifontis [18019 multi-frame micrographs composed of 40 frames each in TIFF format] | Cvirkaite-Krupovic V, Egelman EH, Krupovic M, Wang F [Pubmed: 35727984] [DOI: 10.1073/pnas.2207037119] |
3.7 TB | 3.8 - 4.1 Å |
| 2023-10-06 |  |
Atypical flagella assembly and haploid genome coiling during male gamete formation in Plasmodium [multiple data sets in MRC format] | Hair M [DOI: 10.1101/2023.05.17.540968] |
100.7 GB | — |
| 2023-10-03 |  |
In situ cryo-electron tomography of E. amylovora cells infected by the jumbo bacteriophage RAY [multiple data sets in TIFF format] | Prichard A, Lee J, Laughlin TG, Lee A, Thomas KP, Sy A, Spencer T, Asavavimol A, Cafferata A, Cameron M, Chiu N, Davydov D, Desai I, Diaz G, Guereca M, Hearst K, Huang L, Jacobs E, Johnson A, Kahn S, Koch R, Martinez A, Norquist M, Pau T, Prasad G, Saam K, Sandhu M, Sarabria AJ, Schumaker S, Sonin S, Sonin A, Uyeno A, Zhao A, Corbett K, Pogliano K, Meyer J, Grose JH, Villa E, Dutton R, Pogliano J [Pubmed: 36865095] [DOI: 10.1101/2023.02.24.529968] |
244.3 GB | 8.9 - 38.0 Å |
| 2023-10-03 |  |
Single particle cryo-EM dataset of mouse mitochondrial complex I in the active state [1235 multi-frame micrographs composed of 25 frames each in MRC format] | Agip AA, Blaza JN, Bridges HR, Hirst J [Pubmed: 33067417] [DOI: 10.1038/s41467-020-18950-3] |
179.6 GB | 3.1 - 3.3 Å |
