Due to a storage failure, some data files are currently inaccessible.
We are working to restore access, but if you need the data urgently, please use EMPIAR-EBI.
We are restoring lost files from backups in the following order:
We apologize for the inconvenience and appreciate your understanding.
오사카 대학의 EMPIAR-PDBj 팀은, 아시아의 EM 연구자가 용량이 큰 EM 이미지를 EMPIAR 데이터베이스에 전송하는 것을 돕고 있습니다. 인터넷을 통하여 EBI (UK)에 직>접 데이터를 전송하는 대신, 이용자는 우편이나 택배를 통하여 하드 디스크를 오사카 대학으로 보내실 수 있습니다. 혹은 인터넷을 이용하여 오사카 대학의 서버로 전>송 하실 수 있습니다. 오사카 대학에 데이터 전송 서비스를 희망하시는 분은 데이터를 보내시기 전에 먼저 이메일 통하여 등록하시고 싶은 EM데이터에 관하여 상담하십시오.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2025-10-22 | Single-particle cryo-electron microscopy of PlPVC1 particle in extended state - raw micrographs [20162 multi-frame micrographs composed of 1602 frames each in EER format] | Marín-Arraiza L., Taylor N.M.I. [DOI: 10.1038/s41467-025-64377-z] |
16.8 TB | — | |
| 2025-10-22 | Single-particle cryo-electron microscopy of PlPVC1 particle in contracted state - raw micrographs [17274 multi-frame micrographs composed of 1494 frames each in EER format] | Marín-Arraiza L., Taylor N.M.I. [Pubmed: 41125615] [DOI: 10.1038/s41467-025-64377-z] |
14.0 TB | 3.1 - 10.0 Å | |
| 2025-10-21 | Structural mechanism of RNA-guided RNA editing by the Cas13b-ADAR2 REPAIR complex [multiple data sets in TIFF format] | Ishikawa J., Kato K., Yamashita K., Nishizawa T., Nishimasu H. [Pubmed: 40217120] [DOI: 10.1038/s41594-025-01529-1] |
2.2 TB | 2.59 - 3.71 Å | |
| 2025-10-21 | Cryo-EM structure of Arf1-decorated tubules [12483 multi-frame micrographs composed of 40 frames each in EER format] | Haupt C, Semchonok DA, Daum S, Neudorf SS, Hamdi F, Kastritis P, Stubbs MT, Bacia K [DOI: 10.64898/2026.01.22.700998] |
15.0 TB | 3.1 - 3.79 Å | |
| 2025-10-21 | Single particle cryo-EM of Mycobacterium tuberculosis UvrA and UvrB complexes with DNA [21234 multi-frame micrographs composed of 40 frames each in TIFF format] | Genta M, Chaves-Sanjuan A, Miggiano R [Pubmed: 40210888] [DOI: 10.1038/s41467-025-58670-0] |
7.7 TB | 3.2 - 4.3 Å | |
| 2025-10-20 | Single particle reconstruction of LGTV TP21 strain [7111 multi-frame micrographs composed of 40 frames each in MRC format] | Bisikalo K [Pubmed: 40827915] [DOI: 10.1128/jvi.00870-25] |
4.0 TB | 3.82 Å | |
| 2025-10-19 | volume EM dataset of the 5-day-old Mnemiopsis leidyi aboral organ [620 micrographs in TIFF format] | Jokura K [DOI: 10.7554/eLife.108420.1] |
496.4 GB | — | |
| 2025-10-16 | Raw tilt-series of mitochondria under folding stress [232 multi-frame micrographs composed of 8 frames each in MRC format] | Jung MJ, Roh S-HR | 2.5 TB | 7.3 Å | |
| 2025-10-16 | Supporting cryo-EM datasets of virus-like particles [multiple data sets in TIFF format] | Kavcic L, Kezar A, Kisovec M [Pubmed: 38233506] [DOI: 10.1038/s42004-024-01100-x] |
16.0 TB | 2.41 - 12.75 Å | |
| 2025-10-15 | Cryo-electron tomography of mitotic chromosomes isolated from chicken DT-40 cells with annotated nucleosome positions [multiple data sets in TIFF, MRCS and MRC formats] | Patra G, Harastani M, Eltsov M [Pubmed: 41044063] [DOI: 10.1038/s41467-025-63895-0] |
6.4 GB | 12.79 - 12.89 Å | |
| 2025-10-15 | Cryo-EM structure of antibody TJ5-13 bound to H3 COBRA NG2 hemagglutinin [stack of 13223 particles in TIFF format] | Dzimianski JV, Cruz JM, Balasco Serrao VH, DuBois RM [Pubmed: 40810533] [DOI: 10.1128/jvi.00453-25] |
29.6 TB | 2.61 Å | |
| 2025-10-15 | Human iPSC-Derived Lens Organoids Recapitulate Lens Development and Morphogenesis In Vitro [495 micrographs in TIFF format] | Harrington J, Young RD, Li X, Hayashi R, Regini JW, Quantock AJ, Pierscionek B, Nishida K | 64.5 GB | — | |
| 2025-10-15 | Cryo-correlative light and electron tomography of dopaminergic axonal varicosities reveals non-synaptic modulation of cortico-striatal synapses [400 reconstructed volumes in MRC format] | Paul Lapios PL, Robin Anger RA, Vincent Paget-Blanc VPB, Esther Marza EM, Vladan Lucic VL, Remi Fronzes RF, Etienne Herzog EH, David Perrais DP | 133.0 GB | — | |
| 2025-10-14 | CryoET raw tilt series from lysosomes immunopurified via TRPML1-mNeonGreen-1D4 [multiple data sets in TIFF format] | De Jesús-Pérez JJ, Mcveigh B, Mihelc EM, Moiseenkova-Bell V.Y. | 1.2 TB | 13.8 - 26.6 Å | |
| 2025-10-13 | Cryo electron [21252 multi-frame micrographs composed of 60 frames each in EER format] | Ramírez-Larrota JS, Juyoux P, Guerra P, Eckhard U, Gomis-Rüth FX [Pubmed: 40627637] [DOI: 10.1371/journal.ppat.1013292] |
11.3 TB | 2.81 Å | |
| 2025-10-10 | Single particle cryoelectron microscopy of Human astrovirus 1 spike in complex with neutralizing Fabs 3B4 and 3H4 [7235 multi-frame micrographs composed of 60 frames each in TIFF format] | Lanning S, Balasco Serrao VH, DuBois RM [Pubmed: 39846739] [DOI: 10.1128/jvi.01619-24] |
26.4 TB | 3.33 Å | |
| 2025-10-10 | Cryo electron micrographs of potato virus Y virus-like particles [5344 multi-frame micrographs composed of 16 frames each in TIFF format] | Kežar A, Polak M, Novacek J, Podobnik M, Kisovec M [Pubmed: 31328164] [DOI: 10.1126/sciadv.aaw3808] |
1.5 TB | 4.1 Å | |
| 2025-10-09 | Sec7 regulatory domains scaffold autoinhibited and active conformations [4712 multi-frame micrographs composed of 129 frames each in TIFF format] | Brownfield BAB, Fromme JCF [Pubmed: 38416685] [DOI: 10.1073/pnas.2318615121] |
4.7 TB | 3.7 - 5.3 Å | |
| 2025-10-09 | Single particle Cryo EM of the C-terminal half LRRK2 bound to MLi-2 [5189 multi-frame micrographs composed of 40 frames each in MRC format] | Sanz Murillo M, Villagran Suarez A, Dederer V, Chatterjee D, Alegrio Louro J, Knapp S, Leschziner A [Pubmed: 38039358] [DOI: 10.1126/sciadv.adk6191] |
1.1 TB | 2.99 Å | |
| 2025-10-09 | Single particle Cryo EM of the C-terminal half LRRK2 I2020T mutant bound to MLi-2 [10488 multi-frame micrographs composed of 50 frames each in EER format] | Sanz Murillo M, Villagran Suarez A, Dederer V, Chatterjee D, Alegrio Louro J, Knapp S, Leschziner A [Pubmed: 38039358] [DOI: 10.1126/sciadv.adk6191] |
10.0 TB | 2.7 Å | |
| 2025-10-09 | Cryo-ET of S. cerevisiae Not4Δ Nup188::GFP Nup170::mars cells [multiple data sets in MRC format] | Sachweh J, Beck M [Pubmed: 40829587] [DOI: 10.1016/j.cell.2025.07.025] |
176.6 GB | 35.3 - 46.4 Å | |
| 2025-10-09 | Structural basis and functional roles for Toll-like receptor binding to Latrophilin in C. elegans development [6667 multi-frame micrographs composed of 40 frames each in TIFF format] | Carmona-Rosas G, Li J, Smith JJ, Araç D, Kratsios P, Özkan E [Pubmed: 40588662] [DOI: 10.1038/s41594-025-01592-8] |
1.7 TB | 6.3 Å | |
| 2025-10-08 | Engineered peptide-specific binder in complex with HLA-DR1/CLIP [21332 multi-frame micrographs composed of 1 frames each in EER format] | Jude KM, Yang X, Du H, Kassardjian A, Julien JP, Huang PS, Garcia KC [Pubmed: 39672953] [DOI: 10.1038/s41587-024-02466-y] |
11.9 TB | 2.28 Å | |
| 2025-10-08 | Cryo electron micrographs of potato virus Y [725 micrographs in MRC format] | Kežar A, Polak M, Novacek J, Podobnik M, Kisovec M [Pubmed: 31328164] [DOI: 10.1126/sciadv.aaw3808] |
45.3 GB | 3.4 Å | |
| 2025-10-07 | Human calpain-3 forms a homohexamer [6054 multi-frame micrographs composed of 60 frames each in TIFF format] | Ye Q, Balasco Serrão VH, Davies PL [Pubmed: 39725035] [DOI: 10.1016/j.jbc.2024.108133] |
48.3 TB | 3.85 Å |