EMPIAR-11646 - Cryo-EM structure of full-length ERGIC-53 in complex with MCFD2 [6345 multi-frame micrographs composed of 48 frames each in TIFF format]

EMPIAR-11646

Cryo-EM structure of full-length ERGIC-53 in complex with MCFD2 [6345 multi-frame micrographs composed of 48 frames each in TIFF format]

Publication:

Structure of full-length ERGIC-53 in complex with MCFD2 for cargo transport

Watanabe S, Kise Y, Yonezawa K, Inoue M, Shimizu N, Nureki O, Inaba K

Nature communications 15 (2024)

PMID: 38493152

DOI: 10.1038/s41467-024-46747-1

Related EMDB entry:

EMD-36467 EMD-36469 EMD-36468 EMD-36472 EMD-36471 EMD-36470 EMD-36479

Deposited:

2023-08-07

Released:

2024-05-20

Last modified:

2024-05-20

Imageset size:

1.40 TB

Imageset DOI:

10.6019/EMPIAR-11646

Experimental metadata:

Download xml json

Deposited via PDBj

Contains:

micrographs - multiframe

Image Sets

1. raw movies for full-length ERGIC-53 in complex with MCFD2

Category:

micrographs - multiframe

Image format:

TIFF

No. of images or tilt series:

6345

Image size:

(5760, 4092)

Pixel type:

UNSIGNED BYTE

Pixel spacing:

(0.83, 0.83)

Details:

gain.mrc as a gain reference without rotation and flipping.
Digits (00 to 08) represent the beam shift directions. Beam tilts were not refined per direction.

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Citations

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He L, Bartesaghi A. (2026)

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Fonseca N, Duraisamy AK, Wang Z, Somasundharam S, Tayebinia M, de Oliveira LC, Ma M, Turner J, Patwardhan A, Kleywegt GJ, Hartley M, Morris KL. (2026)

CryoVirusDB: An Annotated Dataset for AI-Based Virus Particle Identification in Cryo-EM Micrographs.

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ICECREAM: high-fidelity equivariant cryo-electron tomography.

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CryoSift: an accessible and automated CNN-driven tool for cryo-EM 2D class selection.

Schäfer JH, Calza A, Hom K, Damodar P, Peng R, Bogdanović N, Lander GC, Stagg SM, Cianfrocco MA. (2025)