大阪大学のEMPIAR-PDBjチームでは、アジアの電顕研究者が、EMPIARデータベースに大きな電顕画像を転送するお手伝いをしています。 ネットワークでイギリスに転送する代わりに、ハードディスク自体を郵送・宅配便で大阪大学に送付、あるいは阪大のサーバまでネットワーク転送していただければ、こちらで仲介して登録サイトへの転送を代行します。 EMPIARへの登録を希望する方で、阪大へのデータ送付・転送をご希望の方は、まず、e-mail で、登録したい電顕画像データについて、ご相談ください。
Release date | Imageset | Title | Authors and references | Size | Resolution |
---|---|---|---|---|---|
2023-02-28 | Cryo pFIB/SEM of PEG beads (test sample) [193 micrographs in TIFF format] | Dumoux M, Glen T, Smith JLR, Ho EML, Perdigão LMA, Pennington A, Klumpe S, Yee NBY, Farmer DA, Lai PYA, Bowles W, Kelley R, Plitzko JM, Wu L, Basham M, Clare DK, Siebert CA, Darrow MC, Naismith JH, Grange M [Pubmed: 36805107] [DOI: 10.7554/elife.83623] |
5.3 GB | — | |
2023-02-28 | Cryo serial FIB SEM of mouse brain tissue [59 micrographs in TIFF format] | Dumoux M, Glen T, Smith JLR, Ho EML, Perdigão LMA, Pennington A, Klumpe S, Yee NBY, Farmer DA, Lai PYA, Bowles W, Kelley R, Plitzko JM, Wu L, Basham M, Clare DK, Siebert CA, Darrow MC, Naismith JH, Grange M [Pubmed: 36805107] [DOI: 10.7554/elife.83623] |
3.0 GB | — | |
2023-02-28 | Cryo serial FIB/SEM of HeLa cells [46 micrographs in TIFF format] | Dumoux M, Glen T, Smith JLR, Ho EML, Perdigão LMA, Pennington A, Klumpe S, Yee NBY, Farmer DA, Lai PYA, Bowles W, Kelley R, Plitzko JM, Wu L, Basham M, Clare DK, Siebert CA, Darrow MC, Naismith JH, Grange M [Pubmed: 36805107] [DOI: 10.7554/elife.83623] |
6.7 GB | — | |
2023-02-28 | Cryo serial FIB/SEM of mouse heart tissue [136 micrographs in TIFF format] | Dumoux M, Glen T, Smith JLR, Ho EML, Perdigão LMA, Pennington A, Klumpe S, Yee NBY, Farmer DA, Lai PYA, Bowles W, Kelley R, Plitzko JM, Wu L, Basham M, Clare DK, Siebert CA, Darrow MC, Naismith JH, Grange M [Pubmed: 36805107] [DOI: 10.7554/elife.83623] |
18.0 GB | — | |
2023-02-28 | Cryo serial FIB/SEM of RPE-1 cells [18 micrographs in TIFF format] | Dumoux M, Glen T, Smith JLR, Ho EML, Perdigão LMA, Pennington A, Klumpe S, Yee NBY, Farmer DA, Lai PYA, Bowles W, Kelley R, Plitzko JM, Wu L, Basham M, Clare DK, Siebert CA, Darrow MC, Naismith JH, Grange M [Pubmed: 36805107] [DOI: 10.7554/elife.83623] |
826.6 MB | — | |
2023-02-27 | Gordonia phage Cozz [2799 multi-frame micrographs composed of 30 frames each in TIFF format] | Podgorski JM [Pubmed: 36649709] [DOI: 10.1016/j.str.2022.12.012] |
759.4 GB | 2.6 Å | |
2023-02-27 | CryoEM micrographs of mouse apoferritin in a range of ice thicknesses on different microscope setups [multiple data sets in MRC and TIFF formats] | Neselu K, Wang B, Rice WJ, Potter CS, Carragher B, Chua EYD [Pubmed: 36742017] [DOI: 10.1016/j.yjsbx.2023.100085] |
5.7 TB | 2.36 - 10.18 Å | |
2023-02-27 | Cryo-EM micrographs of full-length human BIRC6 dimer with a bound DIABLO (SMAC) homodimer [multiple data sets in EER format] | Ehrmann JF, Grabarczyk DB, Clausen T [Pubmed: 36758105] [DOI: 10.1126/science.ade8873] |
24.2 TB | 7.2 Å | |
2023-02-22 | Cryo-EM data of alpha-synuclein A53T fibril induced by CaCl2 [1799 micrographs in MRC format] | Wu KP | 158.0 GB | 2.7 Å | |
2023-02-22 | Light and electron microscopy continuum-resolution imaging of 3D cell cultures [19 multi-frame micrographs composed of 1 frames each in MRC format] | DImprima EDI, Garcia Montero MGM, Gawrzak, SG, Ronchi PR, Zagoriy IZ, Schwab YS, Jechlinger JS, Mahamid JM | 72.9 GB | — | |
2023-02-22 | Electron cryo-tomography data of HeLa cells expressing untagged Cidec [multiple data sets in MRC format] | Ganeva I, Lim K, Boulanger J, Hoffmann PC, Muriel O, Borgeaud AC, Hagen WJH, Savage DB, Kukulski W [Pubmed: 36800289] [DOI: 10.1016/j.celrep.2023.112107] |
42.8 GB | — | |
2023-02-22 | Electron cryo-tomography data of HeLa cells expressing Cidec-EGFP [multiple data sets in MRC format] | Ganeva I, Lim K, Boulanger J, Hoffmann PC, Muriel O, Borgeaud AC, Hagen WJH, Savage DB, Kukulski W [Pubmed: 36800289] [DOI: 10.1016/j.celrep.2023.112107] |
187.3 GB | — | |
2023-02-17 | Principles of mitoribosomal small subunit assembly in eukaryotes [multiple data sets in TIFF format] | Harper NJ, Burnside C, Klinge S [Pubmed: 36482135] [DOI: 10.1038/s41586-022-05621-0] |
73.6 TB | 2.36 - 3.8 Å | |
2023-02-17 | Cryo serial FIB/SEM of Saccharomyces cerevisiae [109 micrographs in TIFF format] | Dumoux M, Glen T, Smith JLR, Ho EML, Perdigão LMA, Pennington A, Klumpe S, Yee NBY, Farmer DA, Lai PYA, Bowles W, Kelley R, Plitzko JM, Wu L, Basham M, Clare DK, Siebert CA, Darrow MC, Naismith JH, Grange M [Pubmed: 36805107] [DOI: 10.7554/elife.83623] |
4.8 GB | — | |
2023-02-17 | Cryo serial FIB/SEM of Vero cells [46 micrographs in TIFF format] | Dumoux M, Glen T, Smith JLR, Ho EML, Perdigão LMA, Pennington A, Klumpe S, Yee NBY, Farmer DA, Lai PYA, Bowles W, Kelley R, Plitzko JM, Wu L, Basham M, Clare DK, Siebert CA, Darrow MC, Naismith JH, Grange M [Pubmed: 36805107] [DOI: 10.7554/elife.83623] |
7.1 GB | — | |
2023-02-17 | Cryo serial FIB/SEM of Rhodospirillum rubrum [43 micrographs in TIFF format] | Dumoux M, Glen T, Smith JLR, Ho EML, Perdigão LMA, Pennington A, Klumpe S, Yee NBY, Farmer DA, Lai PYA, Bowles W, Kelley R, Plitzko JM, Wu L, Basham M, Clare DK, Siebert CA, Darrow MC, Naismith JH, Grange M [Pubmed: 36805107] [DOI: 10.7554/elife.83623] |
5.7 GB | — | |
2023-02-17 | Cryo-EM micrographs of full-length human BIRC6 dimer [11578 multi-frame micrographs composed of 40 frames each in TIFF format] | Ehrmann JF, Grabarczyk DB, Clausen T [Pubmed: 36758105] [DOI: 10.1126/science.ade8873] |
3.0 TB | 7.0 Å | |
2023-02-16 | Enp1-TAP associated immature ribosomal particles from S. cerevisiae [multiple data sets in TIFF format] | Milkereit P, Pöll G [Pubmed: 36996028] [DOI: 10.1371/journal.pone.0283698] |
1.3 TB | 2.7 - 4.3 Å | |
2023-02-16 | Cryo-EM structure of Macrophomina phaseolina macrophomene synthase [multiple data sets in TIFF format] | Adachi N, Mori T, Senda T, Abe I [Pubmed: 35650436] [DOI: 10.1038/s41586-022-04773-3] |
3.1 TB | 3.17 - 4.0 Å | |
2023-02-15 | Escherichia coli gyrase holocomplex with 217 bp phage Mu SGS DNA and albicidin stabilised by ADPNP [14469 multi-frame micrographs composed of 40 frames each in TIFF format] | Michalczyk E, Ghilarov D [Pubmed: 36741192] [DOI: 10.1038/s41929-022-00904-1] |
5.1 TB | 3.06 Å | |
2023-02-15 | Structural basis of a transcription pre-initiation complex on a divergent promoter [51 tilt series in TIFF format] | Gorbea Colón JJ, Palao L, Chen SF, Kim HJ, Snyder L, Chang YW, Tsai KL, Murakami K [Pubmed: 36731470] [DOI: 10.1016/j.molcel.2023.01.011] |
151.3 GB | 26.0 Å | |
2023-02-15 | Structural basis of a transcription pre-initiation complex on a divergent promoter [55 tilt series in TIFF format] | Gorbea Colón JJ, Palao L, Chen SF, Kim HJ, Snyder L, Chang YW, Tsai KL, Murakami K [Pubmed: 36731470] [DOI: 10.1016/j.molcel.2023.01.011] |
105.8 GB | 36.0 Å | |
2023-02-15 | Enp1-TAP associated immature ribosomal particles from S. cerevisiae depleted of rpS21 [8303 multi-frame micrographs composed of 40 frames each in TIFF format] | Milkereit P, Pöll G [Pubmed: 36996028] [DOI: 10.1371/journal.pone.0283698] |
1.3 TB | 2.9 - 3.3 Å | |
2023-02-14 | Nudaurelia capensis omega virus procapsid at pH7.6 (insect cell expressed VLPs) [multiple data sets in MRC format] | Castells-Graells R, Hesketh EL, Johnson JE, Ranson NA, Lawson DM, Lomonossoff GP | 8.5 TB | 4.88 Å | |
2023-02-14 | Nudaurelia capensis omega virus maturation intermediate captured at pH6.25 (insect cell expressed VLPs) [multiple data sets in MRC format] | Castells-Graells R, Hesketh EL, Johnson JE, Ranson NA, Lawson DM, Lomonossoff GP | 8.6 TB | 4.8 Å |